• 제목/요약/키워드: Circular dichroism spectrum

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d-주석산이온과 라세미코발트(III) 착물과의 상호작용에 따른 유발원편광이색성 Spectra와 크로마토그래피 (Induced Circular Dichroism Spectra and Chromatography by Interaction of Some Racemic Cobalt (III) Complexes and d-Tartrate$^2$- in Aqueous Solution)

  • 오창언;강대호;신갑철
    • 대한화학회지
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    • 제25권5호
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    • pp.306-310
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    • 1981
  • 라세미코발트(III)착물인 $[Co(en)_3]^{3+},\;[Co(tn)_3]^{3+},\;cis-[Co(NH_3)(en)_2]^{3+},\;[Co({\beta}-ala)(en)_2]^{2+},\;[Co(gly)(en)_2]^{2+}$ 및 [Co(acac)(en)$_2]^{2+}$을 실온에서 d-주석산염의 수용액에 녹여 원편광이색성 spectra를 측정하였다. 측정된 모든 착물에 대해서 가시부영역 (400∼500nm)에 한개의 음의 CD spectrum이 관측되었다. 이것은 d-주석산이온과 ${\Lambda}$-및 ${\Delta}$-거울상이성질체의 상호작용에 대한 차에의한 것이라고 해석되었다. 즉 ${\Lambda}$-및 ${\Delta}$-거울상이성질체에 d-주석산이온을 각각 부가했을때 ${\Lambda}$-거울상이성질체는 크게 변하였고 ${\Delta}$-거울상이성질체는 약하게 변하여 그 결과 유발원편광이색성 spectrum으로 나타났다. 이온교환 관크로마토그래피에 있어서 용리제와 더 강하게 회합하는 거울상이성질체가 관으로부터 더 빨리 용출된다. 만일 chiral음이온과 착물과의 더 강한 상호작용이 착물의 원래 부호로부터 크로마토그래피의 용리순서를 예측할 수가 있고, 실험결과 용리순서는 측정된 모든 착물에 대하여 유발 원편광이색성 spectrum의 부포로부터 예측된 거울상이성질체의 절대구조와 완전히 일치하였다.

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Absolute Configurations of (±)-Glabridin Enantiomers

  • Kim, Mi-Hyang;Kim, Soo-Un;Kim, Yong-Ung;Han, Jae-Hong
    • Bulletin of the Korean Chemical Society
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    • 제30권2호
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    • pp.415-418
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    • 2009
  • Concerned with ambiguous stereochemistry assignment of natural (+)-glabridin, absolute configurations of (${\pm}$)-glabridin enantiomers were studied with synthetic glabridin. Synthetic glabridin enantiomers were separated by semi-preparative Sumi-chiral column chromatography, and characterized by UV-Vis and NMR spectroscopy. Three-dimensional molecular structure of glabridin was obtained as equatorial Ph-3 half chair chroman ring from semi-empirical PM3 calculation, and refined by coupling constants in $^1H$ NMR spectrum. Finally, absolute configurations of two enantiomers were determined by circular dichroism spectroscopy based on the empirical helicity rules. Absolute configuration of natural (+)-glabridin was confirmed as (R)-glabridin, as known.

Cu(II) Complexes Conjugated with 9-Aminoacridine Intercalator: Their Binding Modes to DNA and Activities as Chemical Nuclease

  • Kim, Jung-Hee;Youn, Mi-Ryung;Lee, Young-Ae;Kim, Jong-Moon;Kim, Seog-K.
    • Bulletin of the Korean Chemical Society
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    • 제28권2호
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    • pp.263-270
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    • 2007
  • New mono- and bis-Cu(II)-triazacyclononane(tacn) complex that conjugated with 9-aminoacridine were synthesized, and their binding modes and DNA cleavage activity were investigated in this study. When the classic intercalator, 9-aminoacridine, was conjugated to mono- and bis-Cu(II)-tacn complexes, a significant red-shift and hypochromism in absorption spectrum was apparent in the acridine absorption region upon binding to DNA. Furthermore, the magnitude of the negative reduced linear dichroism signal in the substrate absorption region appeared to be larger than that in the DNA absorption region. These spectral observations indicated that the acridine moiety intercalated when the Cu(II)-tacn complex was conjugated. In contrast, from a close analysis of the circular and linear dichroism spectrum, the aminoacridine-free bis-Cu(II)-tacn complex was concluded to bind at the phosphate groups of DNA. The 9-aminoacridine-free-bis-Cu(II)-tacn complex produces the nicked and linear DNA. On the other hand, 9-aminoacridine conjugated mono-and bis-Cu(II)-tacn complexes showed unspecific binding with negligible DNA cleavage.

trans-[Co(R,R-chxn)$_2Cl_2]^+$ 착물의 대이온 및 용매의존성 원편광이색성 스펙트라 (Circular Dichroism Spectra on the Counter Ions and the Solvent Dependence of trans-$[Co(R,R-chxn)_2Cl_2]^+$ Complex)

  • 오창언;김양;박성열;도명기
    • 대한화학회지
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    • 제35권5호
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    • pp.493-499
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    • 1991
  • 여러 가지 유기용매에서 서로 다른 대이온을 가진 trans-$[Co(R,R-chxn)_2Cl_2]^+$착물의 원편광이색성(CD) 스펙트럼을 측정하였다. 여기서 R,R-chxn은 (1R,2R)-1,2-diaminocyclohexane 이다. 착물의 CD 스펙트럼에서 관찰된 변화는 현저한 용매의존성을 나타내었다. 그리고 첫 흡수띠 영역$(^1A_{2g})$에서 CD 스펙트럼의 변화 정도는 용매의 donor number(DN)에 의존하였다. trans-[Co(R,R-chxn)$_2Cl_2]^+$ 착물의 CD 스펙트럼 변화는 $^1H$ NMR 스펙트럼으로부터 R,R-chxn 리간드 중의 수평방향의 N-H 수소와 용매분자와의 우선적인 상호작용에 기인되는 것으로 해석되었다.

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NMR and Circular Dichroism Studies on Human CD99 Transmembrane Domain

  • Kim, Hai-Young;Shin, Joon;Shin, Young-Kee;Park, Seong-Hoe;Lee, Weon-Tae
    • 한국자기공명학회논문지
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    • 제7권1호
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    • pp.37-45
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    • 2003
  • Human CD99 is a ubiquitous 32-kDa transmembrane protein encoded by mic2 gene. Recently it has been reported that expression of a splice variant of CD99 transmembrane protein (Type I and Type II) increases invasive ability of human breast cancer cells. To understand structural basis for cellular functions of CD99 Type II, we have initiated studies on hCD99$\^$TMcytoI/ using circular dichroism (CD) and multi-dimensional NMR spectroscopy. CD spectrum of hCD99$\^$TMytoI/ in the presence of 200mM DPC and CHAPS displayed an existence ${\alpha}$-helical conformation, showing that it could form an ${\alpha}$-helix under membrane environments. In addition, we have found that the cytoplasmic domain of CD99 would form symmetric dimmer in the presence of transmembrane domain. Although it has been rarely figured out the correlation between structure and functional mechanism of hCD99$\^$TMcytoI/, the dimerization or oligomerization would play an important role in its biological function.

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Interaction of Ruthenium(II)[(1,10-phenanthroline)2benzodipyrido[3,2-a:2',3'-c]-phenazine]2+ with Single Stranded Poly(dA) and Poly(dT): Turning off the Light Switch

  • Lee, Jeong-Mi;Choi, Ji-Yoon;Kim, Jong-Moon;Lee, Sang-Yong;Lee, Hyo-Sun;Kim, Seog-K.;Cho, Tae-Sub
    • Bulletin of the Korean Chemical Society
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    • 제28권6호
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    • pp.965-969
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    • 2007
  • The spectral properties, namely the circular dichroism, electric absorption and luminescence properties, of Λ- and Δ-[Ru(II)(1,10-phenanthroline)2benzodipyrido[b:3,2-h:2',3'-j]phenazine]2+ ([Ru(phen)2BDPPZ]2+) in the presence and absence of single stranded poly(dA) and poly(dT) were compared in this work. In the presence of single stranded DNAs, hypochromism in the absorption spectrum and significant changes in the circular dichroism spectrum in the ligand absorption band were apparent, indicating the strong interaction of the [Ru(phen)2BDPPZ]2+ complex with the single stranded DNAs. The luminescence intensity of the Ru(II) complex decreased stoichiometrically with increasing concentrations of the single stranded DNAs. All of these spectral changes were independent of the configuration of the Ru(II) complex and the nature of the DNA bases. Therefore, it is conceivable that both enantiomers of the [Ru(phen)2BDPPZ]2+ complex interact electrostatically with the negatively charged phosphate groups of DNA. However, the spectral properties of [Ru(II)(1,10-phenanthroline)3]2+ were not altered even in the presence of single stranded DNAs. Therefore, the size of the ligand involved in the interaction of the metal complex with the phosphate group of DNA may play an important role, even when the nature of the interaction is electrostatic.

아세틸화가 Glycinin의 구조에 미치는 영향 (Effect of Acetylation on Conformation of Glycinin)

  • 김강성;이준식
    • 한국식품과학회지
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    • 제21권5호
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    • pp.714-720
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    • 1989
  • 콩의 주요 저장 단백질인 glycinin의 라이신 잔기를 적당량의 acetic anhydride를 이용하여 28, 65, 85, 95%로 아세틸화시켰다. 아세틸화에 의한 구조적 변화를 solvent perturbant 방법으로 측정한 결과 자연상태의 단백질에 있어서는 타이로신 잔기의 약 40% 미만이 단백질 표면에 노출되어 있었으나 85% 아세틸화 glycinin에 있어서는 70% 이상이 표면에 노출되어 용매에 대해 접근이 용이하게 되었다. 이와 같은 현상은 second derivative spectroscopy에 의해 서로 동일하게 나타났으며, 따라서 아세틸화에 의해 타이로신과 같은 소수성 아미노산이 단백질 표면으로 이동하여 단백질 구조가 변형되었음을 알 수 있었다. 한편 near UV circular dichriosim의 결과 자연상태의 glycinin과 아세틸화가 일어난 glycinin 모두 유사한 모양의 spectra를 나타내었으나 95% 아세틸화 glycinin의 경우에는 tryptophan의 영향이 두드러졌다. Specific viscosity의 경우 아세틸화가 일어날수록 급격히 증가하였는데 이는 아세틸화에 의해 구형의 glycinin이 변형되어 분자의 부피가 커졌을 뿐 아니라 subunit의 분리에 의해 입자수가 증가했기 때문이다.

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Interaction of Cu(II)-meso-tetrakis(n-N-methylpyridiniumyl)porphyrin (n = 2,3,4) with Native and Synthetic Polynucleotides Probed by Polarized Spectroscopy

  • Lee, Mi-Jin;Lee, Gil-Jun;Lee, Dong-Jin;Kim, Seog-K.;Kim, Jong-Moon
    • Bulletin of the Korean Chemical Society
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    • 제26권11호
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    • pp.1728-1734
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    • 2005
  • The interactions of Cu(II)-meso-Tetrakis(n-N-methylpyridiniumyl)porphyrin (n = 2,3,4), respectively referred to as o-, m- and p-CuTMPyP, and DNA, poly$[d(A-T)_2]$ and poly$[d(G-C)_2]$ were investigated by circular and linear dichroism (CD and LD). In the o-CuTMPyP case, in which the rotation of the pyridinium ring is prevented, the shape of the CD spectrum when associated to DNA and poly$[d(A-T)_2]$ resembles and is characterized by a positive band at a low drug to DNA concentration ratio (R ratio) and is bisignate at a high R ratio. The former CD spectrum shape has been attributed to porphyrin that is bound monomerically outside of DNA while the latter can be attributed to those that are stacked. When o-CuTMPyP is bound to poly$[d(G-C)_2]$, the excitonic CD appeared at a relatively high R ratio. In contrast, a characteristic negative CD band in the Soret region was apparent for both m- and p-CuTMPyP when bound to DNA and poly$[d(G-C)_2]$ at the low R ratios, indicating that the porphyrin molecule intercalates. However, the DNA is bent near the intercalation site and the plane of the porphyrin molecule tilts relative to the DNA helix axis, as judged by the magnitude of the reduced LD. Various stacking patterns were identified by the shape of the CD spectrum for m- and p-CuTMPyP when bound to poly$[d(A-T)_2]$. Three species for the former complex and two for the latter complex were found which may reflect the extent of the stacking.

XMCD and PES study of a compensated-ferrimagnetic half-metal Mn3Ga

  • Seong, Seungho;Lee, Eunsook;Kim, Hee Yeon;Kim, Younghak;Baik, Jaeyoon;Kang, J.S.
    • Current Applied Physics
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    • 제18권11호
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    • pp.1190-1195
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    • 2018
  • By employing soft X-ray magnetic circular dichroism (XMCD), soft X-ray absorption spectroscopy (XAS), and photoemission spectroscopy (PES), we have investigated the electronic structure of the candidate zero-moment half-metallic $Mn_3Ga$. We have studied the ball-milled and annealed $Mn_3Ga$ powder samples that exhibit nearly zero magnetization. Mn 2p XAS revealed that Mn ions in $Mn_3Ga$ are nearly divalent for both of the Mn ions having the locally octahedral symmetry and those having the locally tetrahedral symmetry. The measured Mn 2p XMCD spectrum of $Mn_3Ga$ is very similar to that of ferrimagnetic $MnFe_2O_4$ having divalent Mn ions. The sum-rule analysis of the Mn 2p XMCD spectrum shows that both the spin and orbital magnetic moments of Mn ions in $Mn_3Ga$ are negligibly small, in agreement with the nearly compensated-ferrimagnetic ground state of $Mn_3Ga$. The valence-band PES spectrum of $Mn_3Ga$ agrees well with the calculated density of states, supporting the half-metallic electronic structure of $Mn_3Ga$.

Cyclic Oligopyrroles as Sensors for Absolute Configuration Determination of Carboxylic Acids

  • Lintuluoto Juha M.;Nakayama Kana;Setsune Jun-Ichiro
    • 한국고분자학회:학술대회논문집
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    • 한국고분자학회 2006년도 IUPAC International Symposium on Advanced Polymers for Emerging Technologies
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    • pp.241-241
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    • 2006
  • Absolute configuration of carboxylic acids, including amino acids can be determined by circular dichroism (CD) exciton chirality method. This method employs cyclic oligopyrroles able to form stable complexes with carboxylic acids. Addition of carboxylic acids to the oligopyrroles induce CD spectrum at the macrocycle absorption region and in which the sign of the $1^{st}$ Cotton effect is determined solely by the absolute configuration of the carboxylic acid. The basicity of the pyrrole nitrogen can be controlled by macrocycle substitution thus yielding more sensitive chirality sensors.

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