• 제목/요약/키워드: Chromosome 1

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한국인 두경부암 환자에서 제3번 염색체 단완의 결손 (Chromosome 3p Deletions in Korean Head and Neck Carcinomas)

  • 손미나;유영아;조증근;최건;최종욱;김열홍;김준석
    • 대한두경부종양학회지
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    • 제14권1호
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    • pp.20-26
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    • 1998
  • Objectives: Deletion in the short arm of chromosome 3 is common in many human cancers, including sporadic and hereditary renal carcinomas, small cell lung carcinomas, non-small cell lung carcinomas, and carcinomas of the ovary, breast, and cervix. A high frequency of chromosomal aberrations in head and neck cancers involving chromosome 3p has also been reported. These findings suggest that multiple tumor suppressor genes may be present on the short arm of chromosome 3. Materials and Methods: To investigate the possibility of chromosome 3p deletions in the Korean head and neck cancer patients, we applied a polymerase chain reaction(PCR)-based Restriction Fragment Length Polymorphism analysis to the DNA samples of matched normal mucosa and head and neck squamous cell carcinomas from 19 patients. Results: In the 19 normal samples heterozygosity at the polymorphic loci varied: 6 at the D3F15S2 locus(on telomeric 3p21), 2 at the D3S32 locus(on centromeric 3p21), and 4 at the THRB locus(on centromeric 3p24). In 12 matched carcinoma specimens, LOH(loss of heterozygosity) was observed at D3F15S2 in 1 of 6(17%), D3S32 in 1 of 2(50%), and at THRB in 2 of 4 cases(50%). Conclusion: The frequency of chromosome 3p deletion in the Korean head and neck carcinomas appear as other country did.

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Characterization of the porcine Nanog 5'-flanking region

  • Memon, Azra;Song, Ki-Duk;Lee, Woon Kyu
    • Asian-Australasian Journal of Animal Sciences
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    • 제31권3호
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    • pp.449-456
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    • 2018
  • Objective: Nanog, a homeodomain protein, has been investigated in humans and mice using embryonic stem cells (ESCs). Because of the limited availability of ESCs, few studies have reported the function and role of Nanog in porcine ESCs. Therefore, in this study, we investigated the location of the porcine Nanog chromosome and its basal promoter activity, which might have potential applications in development of ESCs specific marker as well as understanding its operating systems in the porcine. Methods: To characterize the porcine Nanog promoter, the 5'-flanking region of Nanog was isolated from cells of mini-pig ears. BLAST database search showed that there are two porcine Nanog genomic loci, chromosome 1 and 5, both of which contain an exon with a start codon. Deletion mutants from the 5'-flanking region of both loci were measured using the Dual-Luciferase Reporter Assay System, and a fluorescence marker, green fluorescence protein. Results: Promoter activity was detected in the sequences of chromosome 5, but not in those of chromosome 1. We identified the sequences from -99 to +194 that possessed promoter activity and contained transcription factor binding sites from deletion fragment analysis. Among the transcription factor binding sites, a Sp1 was found to play a crucial role in basal promoter activity, and point mutation of this site abolished its activity, confirming its role in promoter activity. Furthermore, gel shift analysis and chromatin immunoprecipitation analysis confirmed that Sp1 transcription factor binds to the Sp1 binding site in the porcine Nanog promoter. Taken together, these results show that Sp1 transcription factor is an essential element for porcine Nanog basal activity the same as in human and mouse. Conclusion: We showed that the porcine Nanog gene is located on porcine chromosome 5 and its basal transcriptional activity is controlled by Sp1 transcription factor.

2배체 담배 Nicotiana plumbaginifolia의 핵형 분석과 rDNAs의 Physical Mapping (Karyotype Analysis and Physical Mapping of rDNAs in Diploid Nicotiana plumbaginifolia)

  • 조혜경;구달회;김수영;방재욱
    • Journal of Plant Biotechnology
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    • 제30권1호
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    • pp.7-11
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    • 2003
  • 2배체 담배인 Nicotiana plumbaginifolia를 대상으로 상염색법과 FISH 기법을 통한 염색체 분석을 수행하여 다음과 같은 결과를 얻었다. N. plumbaginifolia의 체세포 염색체 수는 2n=20이며, arm ratio 비교를 통한 핵형 분석에서 중기 염색체 조성은 3쌍의 중부 염색체 (염색체 1,2 및 7)와 7쌍의 차중부 염색체 (염색체 3, 4, 5, 6, 7, 9 및 10)로 관찰되었다. 염색체의 길이는 2.29~4.50 $\mu\textrm{m}$로 나타났으며, 염색체 1번과 2번은 부수체 염색체로 관찰되었다. 5S와 45S rDNA를 탐침으로 FISH를 수행한 결과 2번 염색체의 동원체 부위에서 한 쌍의 5S signal이 확인되었고, 1번 염색체의 부수체에서 한 쌍의 45S signal이 관찰되었다.

한반도에 자생하는 산뽕나무(Morus bombycis Koidz.), 몽고뽕나무(Morus mongolica C.K. Schn.) 및 돌뽕나무(Morus tiliaefolia Makino)의 염색체수 (The Study on Chromosome Number of Morus bombycis Koidz., Morus Mongolica C.K.Schn.and Morus tiliaefolia Makino Growing Wild in the Korea Peninsula)

  • 박광준
    • 한국잠사곤충학회지
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    • 제43권1호
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    • pp.53-54
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    • 2001
  • The chromosome number of Morus bombycis Koidz. and Morus monogolica C.K.Schn. growing wild in the Korea Peninsula is diploid (2n=28) and that of Morus tiliaefolia Makino is hecxaploid (2n=84). The somatic cell division of each species is nomal.

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감돌고기속 Genus Pseudopungtungia (어강;잉어과) 어류의 핵형 (Karyotypes of the Genus Pseudopungtungia (Pisces, Cyprinidae))

  • 김익수;심재환
    • 한국동물학회지
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    • 제34권1호
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    • pp.54-58
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    • 1991
  • 감돌고기속 어류에는 2종이 알려져 있으며 이들은 모두 한국고유어종이다. 감돌고기 Pseudopugtungia nigra의 핵형분석 결과 diploid chromosome number는 50이었으며, 7쌍의 metacentric, 18쌍의 $_{submeta}$telocentric chromosome으로 구성되어져 잇었다. 가는 돌고기 P. tenuicorpus의 2N은 50이었으며 10쌍의 metacentric, 15쌍의 $_{submeta}$telocentric chromosome으로 구성되어져 있었다.

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동시화된 포유동물 세포에서 돌연변이원에 의해 유발된 염색체 이상에 미치는 DNA중합효소와 DNA위상이성질화효소의 저해제의 효과 (The Effects of Inhibitors of DNA Polymerases and Topoisomerase on Chromosome Aberrations Induced by Mutagens in Synchronized Mammalian Cells)

  • 엄경일;신은주;권영순
    • 한국환경성돌연변이발암원학회지
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    • 제10권2호
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    • pp.85-92
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    • 1990
  • 동시화시킨 CHO세포를 재료로하여 EMS 혹은 BLM에 의해 유발된 염색체 이상에 미치는 APC, ddTTP, 그리고 NOV의 효과를 조사하였다. 세포의 동시화는 thymidine block방법을 사용하였다. APC, ddTTP, 그리고 NOV의 단독처리는 염색체 이상을 유발하지 않았다. EMS에 의해 유발된 염색체 이상은 late G$_1$과 early S기에 높은 감수성을 나타내었고, BLM에 의해 유발된 염색체 이상은 G$_2$기에 가장 높은 감수성을 나타내었다. APC를 후처리할 경우 late G$_1$기와 early S기에서 EMS에 의해 유발된 염색체이상을 증가시켰다. 그러나 ddTTP나 NOV를 복합처리하기전 NOV를 전처리하면 late G$_1$기와 early S기에서의 염색체 이상이 증가되었다. 이런 결과들은 여러 가지 돌연변이원에 따라 각기 다른 세포내 반응이 유발되며 염색체 이상에서의 각 효소들의 활성 또한 다른 것으로 추측된다.

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단관백색레그혼순계에 있어 중심입지수, 등완비 및 상대적길이에 의한 염색체의 형태적 특징과 수에 관한 연구 (Study on the Chromosome Size, Number and Shape by the Centromeric Index, Arm Ratio and Relative Length in Single Comb White Leghorns)

  • 오봉국;손시환;최연호
    • 한국가금학회지
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    • 제13권2호
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    • pp.167-172
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    • 1986
  • 본 연구는 단관백백레그혼순계 염색체의 형태적 특징과 크기를 명확히 구명하기 위하여 중심입지수, 등 완비 및 상대적 길이를 측정하여 이용하고 이들의 염색체 수를 밝혔다. 시험재료로서는 서울대학교 부속목장에서 사육중인 단관백색레그혼순계 암컷 20수와 수컷 5수를 공시하고 이들을 수정시켜 50개의 수정란에 대하여 염색체 분석을 하였다. 분석방법으로서는 중기상의 포착을 위하여 colchicine을 이용하고, hypotonic, fixation, air-drying 처리를 하여 나타난 초기 metaphase상으로서 핵형분석하였다. 시험 결과 분석된 각 염색체의 형태적 특징은 다음과 같다. 1. 1,2심 염색체 : meta 및 submetacentric으로서 이들 둘 간에는 크기에 따라 명확히 구분된다. 2. 3,4심 염색체 : 길이는 서로 비슷하나, 4심 염색체에서는 짧은 단완이 나타나고, 3심은 acrocentric 형태이다. 3. 5심 염색체 : 성염색체(Z)로서 metacentric 형태이다. W 염색체 역시 metacentric 이지만 7-8심 염색체 크기 정도이다. 4. 6심 염색체 : 3심과 같이 acro 형체이나 3심 염색체 크기의 반정도이다. 5. 7,8심 염색체 : 6심 크기의 반정도로서 길이는 서로 비슷하나 7심은 짧은 단완을 가지고, 8심은 acrocentric 염색체이다. 6. 9심 염색체 : 7심과 8심의 크기와 비슷하나 metacentric 양상이다. 7. 나머지 30쌍의 소형염색체 : 점의 형태로서 대부분 acrocentric 형태이다. 이 밖에도 염색체의 수에 있어서 관찰된 sample의 58%가 78개로 나타났고, 나머지는 72-77개로 나타남에 따라 이의 염색체 수는 최소 78개로 사료된다.

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수핵란의 전 활성화가 토끼 핵이식 수정란의 핵 재구성에 미치는 효과 (Effect of Electrical Preactivation of Recipient Cytoplasm on Nuclear Remodelling in Nuclear Transplant Rabbit Embryos)

  • 전병균;김윤연;정기화;곽대오;이효종;최상용;박충생
    • 한국가축번식학회지
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    • 제21권3호
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    • pp.229-238
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    • 1997
  • Chromosome condensation and swelling of the donor nucleus have been known as the early morphological indicators of chromatin remodelling after injection of a foreign nucleus into an enucleated recipient cytoplasm. The effects of non-preactivation and electrical preactivation of recipient cytoplasm, prior to fusing a donor nucleus, on the profile of nuclear remodelling in the nuclear transplant rabbit embryos were evaluated. The embryos of 16-cell stage were collected and synchronized to G1 phase of 32-cell stage. The recipient cytoplasms were obtained by removing the first polar body and chromosome mass by non-disruptive microsurgical procedure. The separated G1 phase blastomeres of 32-cell stage were injected into non-preactivated recipient cytoplasms. Otherwise, the enucleated recipient cytoplasms were preactivated by electrical stimulation and the separated G1 phase blastomeres of 32-cell stage were injected. After culture until 20h post-hCG injection, the nuclear transplant oocytes were electrofused by electrical stimulation. The nuclei of nuclear transplant embryos fused into non-preactivated and/or preactivated recipient cytoplasm were stained by Hoechst 33342 at 0, 1.5, 2, 4, 6, 8, 10 hrs post-fusion and were observed under an fluorescence microscopy. Accurate measurements of nuclear diameter were revealed with an ocular micrometer at 200$\times$. Upon blastomere fusion into non-preactivated recipient cytoplasm, a prematurely chromosome condensation at 1.5 hrs post-fusion and nuclear swelling at 8 hrs post-fusion were occurred as 91.6% and 86.1%, respectively. But the nuclei of nuclear transplant embryos fused into preactivated recipient cytoplasm, as o, pp.sed to non-preactivated recipient cytoplasm, were not occurred chromosome condensation and extensive nuclear swelling. Nuclear diameter fused into non-preactivated and preactivated recipient cytoplasm at hrs post-fusion was 30.2$\pm$0.74 and 15.2$\pm$1.32${\mu}{\textrm}{m}$, respectively. These results indicated that onset of unclear condensation and swelling which was associated with oocytes activation were critical steps in the process of chromatin swelling. Futhermore, complete reprogramming seemed only possible after remodelling of the donor nucleus by chromosome condensation and nuclear swelling.

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항암제와 세포독성에 내성을 나타내는 생쥐 임파종 세포(NS-1)의 염색체 분포특성 (Ploidy Characteristics of NS-1 Cells Resistant to BCNU or CCNU and Immune mediated Cytotoxicity in vitro)

  • 심우남;김영민;김주덕;이원영
    • 대한미생물학회지
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    • 제19권1호
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    • pp.85-108
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    • 1984
  • In order to study the relationship between resistance of tumor cells to anticancer drugs and immunologic cytotoxicity and their chromosome number, a line of cancer cells (NS-1) was exposed to BCNU and CCNU in vitro. Characteristics of the distribution of chromosome number of the survived cells were then comparatively analyzed. Effect of immune mediated cytotoxicity, i.e. complement and cell-mediated cytotoxicity, on the ploidy characteristics was observed in the same way. NS-1 cells were found to be a population of neoplastic cells of heterogeneity having 5 to 115 chromosomes per cell in metaphase. The majority of the cells were belong to the class of chromosome number 56 to 60 which were considered as the stem cell line. Dramatic changes in the distribution of chromosome number following drug treatment were not observed. However the range of chromosome distribution was slightly changed. Characteristics of chromosomal distribution of drug treated cells were not significantly varied by different doses of drug treated. Changed chromosomal distribution patterns of drug treated cells were reversible, especially the cells having 56 to 60 chromosomes recovered rapidly. Cells having 41-60 and 61-80 chromosomes among cells treated with BCNU and cells with 41-60 chromosomes after CCNU treatment were the major population which regenerated continuously. Following BCNU treatment cells having 61-80 chromosomes were not varied much whereas CCNU treatment affects the population in the same class. Chromosomal aberrations were significantly enhanced by BCNU and CCNU treatment. The frequency of chromosomal aberrations was greater in cells having more than 40 chromosomes compared with that in cells having less than 40 chromosomes. Changes in ploidy characteristics of the cells following complement mediated and cell mediated cytotoxicity were not significant. Therefore it was tentatively concluded that association of numerical distribution pattern of NS-1 cells with the response to the treatment used in this experiment was not recognized.

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산삼배양추출물의 배양 Chinese Hamster Lung 세포를 이용한 염색체이상시험 (The Chromosomal Aberration Test of Wild Ginseng Culture Extract in Chinese Hamster Lung Cell)

  • 송시환;양덕춘;정세영
    • Toxicological Research
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    • 제21권1호
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    • pp.57-62
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    • 2005
  • To investigate the mutant induction of wild ginseng culture extract, we performed chromosomal aberration assay with chinese hamster lung cell in vitro. The test concentration of the extract was decided for the standard with the 50% suppression of cell propagation in the cell. The concentrations for the chromosome test were 1,250, 2,500 and 5,000 ㎍/ml with metabolic activation (+S, 6 hours treatment), 1,100, 2,200 and 4,400 ㎍/ml without metabolic activation (-S, 6 hours treatment) 800, 1,600 and 3,200 ㎍/ml without metabolic activation (-S, 24 hours treatment). No significant increase in chromosome aberrations was observed at any of these concentrations both in the absence and presence of metabolic activation system. Cyclophosphamide monohydrate (CPA) and ethylmethanesulfonate (EMS) caused a significant increase in chromosome aberration. These results may be concluded that wild ginseng culture extract is not capable of inducing chromosome aberration in cultured chinese hamster lung cell regardless of metabolic activation and genotoxicity of that is negative under the present experimental condition.