• 제목/요약/키워드: Chemical mutagenesis

검색결과 117건 처리시간 0.027초

형광 단백질 mCherry-I202T의 pH 감응성 분석 (Characterization of pH Dependent Properties of mCherry Mutant, I202T)

  • 이상민;정민섭
    • 공업화학
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    • 제32권1호
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    • pp.10-14
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    • 2021
  • DsRed에서 유래한 적색 형광 단백질들 중 하나인 mCherry는 GFP와 유사한 3차 구조를 가진 잘 알려진 적색 형광 단백질 중 하나이며, 수소결합 네트워크를 형성하고 있지 않아서 pH 변화에 민감하지 않다. 반면 mCherry의 발색단 근처에서 돌연변이를 야기 시켜 만든 mCherry-I202T는 mCherry 단백질의 202번째 아미노산인 이소루신(Ile)을 트레오닌(Thr)으로 치환함으로써 모체와는 다르게 추가적인 수소결합을 형성하여, 주위 pH에 더욱 민감하게 반응할 뿐 아니라 적색 편이된 형광을 보였다. 수소결합이 확장된 I202T의 pH 민감성을 검증하기 위해 산성과 염기성 pH 범위에서 I202T의 UV-vis 흡광 스펙트럼 변화와 가역성을 확인하고, 그를 pH sensor에 적용 가능한지 그 가능성을 검증하고자 하였다.

화학적 변이에 대한 Cinnamaldehyde의 항돌연변이 (The Mechanism of Antimutagenic Effect of Cinnamaldehyde on Chemical Mutagenesis)

  • 송근섭;한상배;최동성
    • 한국식품영양학회지
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    • 제10권3호
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    • pp.407-413
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    • 1997
  • Cinnamaldehyde의 항돌연변이 작용기구를 밝히기 위하여 E. coli B/r 및 K-12 계열의 다양한 DNA 수복 결손주를 이용하여 4-NQO 및 MNNG에 대한 돌연변이 억제 효과 및 생존율 변화에 대하여 조사하였다. SOS response가 항상 발현되는 균주인 GW1107의 $\beta$-Gal 활성과 41$^{\circ}C$에서 $\beta$-Gal을 합성하는 균주인 GW1060 및 GW1103의 $\beta$-Gal 활성에도 cinnamaldehyde는 효과를 나타내지 못하였다. 이와 같은 결과는 cinnamaldeyde가 LexA와 같은 repressor로서 작용하지 못함은 물론 SOS response를 positive하게 조절하는 RecA 기능에 대하여 아무런 변화를 주지 못한다는 사실을 제시한다. 또한 Trp+ 복귀돌연변이주의생육 및 세포생장 속도에도 영향을 미치지 못하였다. 4-NQO 처리된 균주(WP2s, ZA159 및 TK603)에서 cinnamaldehyde의 첨가로 돌연변이율이 감소되었음\ulcorner 불구하고 생존율은 크게 향상되었다. 그러나 절제 수복기능이 결여되지 않은 WP2 및 lexA 유전자 결손주(CM561 및 CM611)에서는 그와 같은 효과가 나타나지 않았으며, 상보적 DNA의 gap을 연결시켜주는 polymerase I이 결여된 균주인 WP67에서도 생존율이 증가되지 않았다. 위와 같은 결과를 종합하여 볼 때 cinnamaldehyde는 오류 없는 재조합 수복계를 향상시킴으로써 항돌연변이 효과를 나타내는 것으로 추정되었다.

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Casein Kinase 2 interacts with human mitogen- and stress-activated protein kinase MSK1 and phosphorylates it at Multiple sites

  • Shi, Yan;Han, Guanghui;Wu, Huiling;Ye, Kan;Tian, Zhipeng;Wang, Jiaqi;Shi, Huili;Ye, Mingliang;Zou, Hanfa;Huo, Keke
    • BMB Reports
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    • 제42권12호
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    • pp.840-845
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    • 2009
  • Mitogen- and stress-activated protein kinase (MSK1) palys a crucial role in the regulation of transcription downstream of extracellular-signal-regulated kinase1/2 (ERK1/2) and mitogen-activated protein kinase p38. MSK1 can be phosphorylated and activated in cells by both ERK1/2 and p38$\alpha$. In this study, Casein Kinase 2 (CK2) was identified as a binding and regulatory partner for MSK1. Using the yeast two-hybrid system, MSK1 was found to interact with the CK2$\beta$ regulatory subunit of CK2. Interactions between MSK1 and the CK2$\alpha$ catalytic subunit and CK2$\beta$ subunit were demonstrated in vitro and in vivo. We further found that CK2$\alpha$ can only interact with the C-terminal kinase domain of MSK1. Using site-directed mutagenesis assay and mass spectrometry, we identified five sites in the MSK1 C-terminus that could be phosphorylated by CK2 in vitro: Ser757, Ser758, Ser759, Ser760 and Thr793. Of these, Ser757, Ser759, Ser760 and Thr793 were previously unknown.

Quantitative and Qualitative Extrapolation of Carcinogenesis Between Species

  • Gold Lois Swirsky;Manley Neela B.;Ames Bruce N.
    • 대한예방의학회:학술대회논문집
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    • 대한예방의학회 1994년도 교수 연수회(환경)
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    • pp.431-438
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    • 1994
  • As currently conducted, standard rodent bioassays do not provide sufficient information to assess carcinogenic risk to humans at doses thousands of times below the maximum tolerated dose. Recent analyses indicate that measures of carcinogenic potency from these tests are restricted to a narrow range about the maximum tolerated dose and that information on shape of the dose-response is limited in experiments with only two doses and a control. Extrapolation from high to low doses should be based on an understanding of the mechanisms of carcinogenesis. We have postulated that administration of the maximum tolerated dose can increase mitogenesis which, in turn. increases rates of mutagenesis and, thus, carcinogenesis. The animal data are consistent with this mechanism, because about half of all chemicals tested are indeed rodent carcinogens, and about 40% of the positives are not detectably mutagenic. Thus, at low doses where cell killing does not occur, the hazards to humans of rodent carcinogens may be much lower than commonly assumed. In contrast, for high-dose exposures in the workplace, assessment of hazard requires comparatively little extrapolation. Nevertheless. permitted workplace exposures are sometimes close to the tumorigenic dose-rate in animal tests. Regulatory policy to prevent human cancer has primarily addressed synthetic chemicals, yet similar proportions of natural chemicals and synthetic chemicals test positive in rodent studies as expected from an understanding of toxicological defenses, and the vast proportion of human exposures are to natural chemicals. Thus, human exposures to rodent carcinogens are common. The natural chemicals are the control to evaluate regulatory strategies, and the possible hazards from synthetic chemicals should be compared to the possible hazards from natural chemicals. Qualitative extrapolation of the carcinogenic response between species has been investigated by comparing two closely related species: rats and mice. Overall predictive values provide moderate confidence in interspecies extrapolation; however, knowing that a chemical is positive at any site in one species gives only about a 50% chance that it will be positive at the same site in the other species.

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${\alpha}-Amylase$ 고생산성 Bacillus licheniformis 변이주의 개발과 특성 분석 (Development of an ${\alpha}-amylase-hyperproducing$ mutant of Bacillus licheniformis and its characteristics)

  • 정허진;정경화;장종수;윤기흥;박승환;김훈
    • Applied Biological Chemistry
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    • 제41권1호
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    • pp.18-22
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    • 1998
  • Bacillus licheniformis를 화학적 돌연변이를 시켜 내열성 ${\alpha}-amylase$ 고생산성 변이주 SK-5를 얻었다. 변이주는 모균에 비하여 약 50배 정도의 ${\alpha}-amylase$를 생산하였으며, 그 모양이 가늘고 길이가 길어졌고, 성장속도가 감소되었다. 이 효소의 유전적 변화를 분석하기 위하여 변이주 SK-5로부터 ${\alpha}-amylase$ 유전자 염기배열을 결정한 결과 구조유전자의 염기배열은 동일하였으나 promoter 지역에서 일부 변이가 일어난 것이 확인되어 이것이 부분적으로 효소생산성 증가에 영향을 미칠 것으로 여겨진다. SK-5의 ${\alpha}-amylase$ 생산성이 높기 때문에 이의 배양상층액으로부터 열처리와 황산암모늄 침전 후 한 단계의 hydroxyapatite 컬럼을 사용하여 순수하게 정제된 ${\alpha}-amylase$를 얻을 수 있었다. 변이에 따른 세포외 단백질분해효소의 영향을 검증하기 위하여 SK-5 배양액을 시간별로 준비하여 Western blot으로 분석한 결과 변이주에서 분비되는 ${\alpha}-amylase$의 구조에 변화가 없음을 확인하였다.

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Ethylmethanesulphonate에 의한 구멍갈파래(Ulva Pertusa Kjellman)의 돌연변이유기 (Chemical Mutagenesis of Ulva Pertusa Kjellman by Ethylmethanesulphonate)

  • 송상호;고남표;청규화
    • 한국양식학회지
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    • 제4권1호
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    • pp.67-71
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    • 1991
  • 돌연변이유기를 통한 유용견전형질의 해조류품종을 개발하기 위해 화학적돌연변이유발원인 Ethyl-methanesulphonate(EMS)에 대한 구멍갈파래(Ulva pertusa Kjellman) 엽체의 감수성을 검토하여 효과적인 돌연변이유기조건을 찾고자 하였다. EMS를 처리한 배지에 엽체를 생장시키며 변이를 유발시키고자 하였을 때, $0.05{\%}$$0.025{\%}$의 EMS 처리구에서 각각 $100{\%}$와 약 $20{\%}$의 생장억제가 일어났다. 한편 고농도의 EMS액에 엽체를 일정시간 침적한 후 정상배양함으로서 변이를 유발코자 했을 때, $1.0{\%}$ EMS액에 40분과 $0.5{\%}$ EMS액에 80분 처리한 경우 각각 $100{\%}$와 약 $10{\%}$의 생장억제가 일어났다. EMS 처리된 엽체는 생장형과 체색이 모체와 전혀 다른 변이체로 나타나기도 하였는데 이들의 polypeptide 일부에 변화가 있음이 SDS-PAGE로 조사되었다.

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Food Safety of Functional Neoglycoproteins Prepared by Covalent Attachment of Galactomannan to Food Proteins

  • Nakamura, Soichiro;Dokai, Kazumi;Matsuura, Megumi;Hata, Junya;Saeki, Hiroki
    • Preventive Nutrition and Food Science
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    • 제7권2호
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    • pp.139-145
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    • 2002
  • Hen egg-white lysozyme, ovalbumin, egg-yolk phosvitin, acid-precipitated soy protein and $\alpha$$_{sl}$ milk casein were covalently linked with galactomannan through a controlled dry-heating at 6$0^{\circ}C$ under 79% relative humidity without any chemical reagent. Neoglycosylation by the covalent binding of polysaccharide chains brought a significant improvement into the surface functionalities of food proteins. Excellent emulsifying properties and foaming properties were observed in all protein-galactomannan conjugates. Bacterial mutagenesis tests and animal dose test were done to evaluate the food safety of the protein-galactomannan conjugates. The neo-glycoproteins were negative for Ames test using Salmonella typhimurium TA100 (hisG46) and TA98 (hisD3052) strains, and rec-assay using Bacillus subtilis Hl7 (rec) and M45 (re $c^{+}$) strains. All substances were also nontoxic for oral administration to rats. L $D_{50}$ 's of these substances were all more than 7.5 g/kg body-weight of rat. No effect was also observed in the weight increases and the concentrations of total cholesterol, triglyceride and phospholipids in blood serum of the administrated rats with 7.5 g/kg conjugates. Thus, Maillard-type protein-polysaccharide conjugates prepared by covalent attachment of galactomannan to food proteins were proposed to be useful as a safe functional biopolymer in this study.y.

Improvement of FK506 Production in the High-Yielding Strain Streptomyces sp. RM7011 by Engineering the Supply of Allylmalonyl-CoA Through a Combination of Genetic and Chemical Approach

  • Mo, SangJoon;Lee, Sung-Kwon;Jin, Ying-Yu;Suh, Joo-Won
    • Journal of Microbiology and Biotechnology
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    • 제26권2호
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    • pp.233-240
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    • 2016
  • FK506, a widely used immunosuppressant, is a 23-membered polyketide macrolide that is produced by several Streptomyces species. FK506 high-yielding strain Streptomyces sp. RM7011 was developed from the discovered Streptomyces sp. KCCM 11116P by random mutagenesis in our previous study. The results of transcript expression analysis showed that the transcription levels of tcsA, B, C, and D were increased in Streptomyces sp. RM7011 by 2.1-, 3.1-, 3.3-, and 4.1-fold, respectively, compared with Streptomyces sp. KCCM 11116P. The overexpression of tcsABCD g enes in Streptomyces sp. RM7011 gave rise to approximately 2.5-fold (238.1 μg/ml) increase in the level of FK506 production compared with that of Streptomyces sp. RM7011. When vinyl pentanoate was added into the culture broth of Streptomyces sp. RM7011, the level of FK506 production was approximately 2.2-fold (207.7 μg/ml) higher than that of the unsupplemented fermentation. Furthermore, supplementing the culture broth of Streptomyces sp. RM7011 expressing tcsABCD genes with vinyl pentanoate resulted in an additional 1.7-fold improvement in the FK506 titer (498.1 μg/ml) compared with that observed under non-supplemented condition. Overall, the level of FK506 production was increased approximately 5.2-fold by engineering the supply of allylmalonyl-CoA in the high-yielding strain Streptomyces sp. RM7011, using a combination of overexpressing tcsABCD genes and adding vinyl pentanoate, as compared with Streptomyces sp. RM7011 (95.3 μg/ml). Moreover, among the three precursors analyzed, pentanoate was the most effective precursor, supporting the highest titer of FK506 in the FK506 high-yielding strain Streptomyces sp. RM7011.

Contribution of Arginine 13 to the Catalytic Activity of Human Class Pi Glutathione Transferase P1-1

  • Kong, Ji-Na;Jo, Dong-Hyeon;Do, Hyun-Dong;Lee, Jin-Ju;Kong, Kwang-Hoon
    • Bulletin of the Korean Chemical Society
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    • 제31권9호
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    • pp.2497-2502
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    • 2010
  • Arg13 is a conserved active-site residue in all known Pi class glutathione S-transferases (GSTs) and in most Alpha class GSTs. To evaluate its contribution to substrate binding and catalysis of this residue, three mutants (R13A, R13K, and R13L) were expressed in Escherichia coli and purified by GSH affinity chromatography. The substitutions of Arg13 significantly affected GSH-conjugation activity, while scarcely affecting glutathione peroxidase or steroid isomerase activities. Mutation of Arg13 into Ala largely reduced the GSH-conjugation activity by approximately 85 - 95%, whereas substitutions by Lys and Leu barely affected activity. These results suggest that, in the GSH-conjugation activity of hGST P1-1, the contribution of Arg13 toward catalytic activity is highly dependent on substrate specificities and the size of the side chain at position 13. From the kinetic parameters, introduction of larger side chains at position 13 results in stronger affinity (Leu > Lys, Arg > Ala) towards GSH. The substitutions of Arg13 with alanine and leucine significantly affected $k_{cat}$, whereas substitution with Lys was similar to that of the wild type, indicating the significance of a positively charged residue at position 13. From the plots of log ($k_{cat}/{K_m}^{CDNB}$) against pH, the $pK_a$ values of the thiol group of GSH bound in R13A, R13K, and R13L were estimated to be 1.8, 1.4, and 1.8 pK units higher than the $pK_a$ value of the wild-type enzyme, demonstrating the contribution of the Arg13 guanidinium group to the electrostatic field in the active site. From these results, we suggest that contribution of Arg13 in substrate binding is highly dependent on the nature of the electrophilic substrates, while in the catalytic mechanism, it stabilizes the GSH thiolate through hydrogen bonding.

Impact of Expanded Small Alkyl-Binding Pocket by Triple Point Mutations on Substrate Specificity of Thermoanaerobacter ethanolicus Secondary Alcohol Dehydrogenase

  • Dwamena, Amos K.;Phillips, Robert S.;Kim, Chang Sup
    • Journal of Microbiology and Biotechnology
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    • 제29권3호
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    • pp.373-381
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    • 2019
  • Site-directed mutagenesis was employed to generate five different triple point mutations in the double mutant (C295A/I86A) of Thermoanaerobacter ethanolicus alcohol dehydrogenase (TeSADH) by computer-aided modeling with the aim of widening the small alkyl-binding pocket. TeSADH engineering enables the enzyme to accept sterically hindered substrates that could not be accepted by the wild-type enzyme. The underline in the mutations highlights the additional point mutation on the double mutant TeSADH introduced in this work. The catalytic efficiency ($k_{cat}/K_M$) of the ${\underline{M151A}}$/C295A/I86A triple TeSADH mutant for acetophenone increased about 4.8-fold higher than that of the double mutant. A 2.4-fold increase in conversion of 3'-methylacetophenone to (R)-1-(3-methylphenyl)-ethanol with a yield of 87% was obtained by using ${\underline{V115A}}$/C295A/I86A mutant in asymmetric reduction. The ${\underline{A85G}}$/C295A/I86A mutant also produced (R)-1-(3-methylphenyl)-ethanol (1.7-fold) from 3'-methylacetophenone and (R)-1-(3-methoxyphenyl)-ethanol (1.2-fold) from 3'-methoxyacetophenone, with improved yield. In terms of thermal stability, the ${\underline{M151A}}$/C295A/I86A and ${\underline{V115A}}$/C295A/I86A mutants significantly increased ${\Delta}T_{1/2}$ by $+6.8^{\circ}C$ and $+2.4^{\circ}C$, respectively, with thermal deactivation constant ($k_d$) close to the wild-type enzyme. The ${\underline{M151A}}$/C295A/I86A mutant reacts optimally at $70^{\circ}C$ with almost 4 times more residual activity than the wild type. Considering broad substrate tolerance and thermal stability together, it would be promising to produce (R)-1-(3-methylphenyl)-ethanol from 3'-methylacetophenone by ${\underline{V115A}}$/C295A/I86A, and (R)-1-phenylethanol from acetophenone by ${\underline{M151A}}$/C295A/I86A mutant, in large-scale bioreduction processes.