• Title/Summary/Keyword: Cell clusters

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Shudies on the Leydig cells in the Testis of Korean Native Goats (한국재래산양의 정소내 Leydig 세포에 관한 연구)

  • 이성호
    • Korean Journal of Animal Reproduction
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    • v.9 no.1
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    • pp.56-61
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    • 1985
  • This study was conducted in order to obtain the number and size of Leydig cell in the testis in accordance with the growth of Korean native goat. Twenty-one Korean native male goats were examied, and was divided into seven groups by 4 weeks interval from 8 to 32 weeks of age. The results were as follows: 1. The number of Leydig cells in the interstitial tissue were increased in accordance with age. The number of cells were increased twice from 1.3 cells at 8 weeks to 2.6 cells at 12 weeks of age, from 2.6 cells at 12 weeks to 5.5 cells at 24 weeks, respectively. And the cells were slightly increased from 5.5 cells at 16 weeks to 6.7 cells at 32 weeks. 2. The smallest cells were found in goats at 8 weeks of age, being 8.2${\mu}$m, and it showed noncontinual growth among groups of 12, 16 and 20 weeks of age, recording 9.18, 8.82 and 9.05${\mu}$m respectively. Leyding cells in 24, 28 and 32 weeks of age showed matured size being 10.42, 10.81 and 10.67${\mu}$m respectively. 3. Rows or clusters of Leydig cells were scattered in the loose connective tissue around lymphatic simusoids and blood vessels. Nuclei of Leydig cells were found to have 2 types, one type was stained pale and the other were stained dark. As a result of this study, Leydig cells found in the interstitial tissue were considered to grow until 20 weeks of age after birth, and reached to almost full maturated form by 24 weeks of ages.

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Chemotaxonomic and Phylogenetic Study on the Oligotrophic Bacteria Isolated from Forest Soil

  • Whang, Kyung-Sook
    • Proceedings of the Korean Society for Applied Microbiology Conference
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    • 2000.04a
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    • pp.150-156
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    • 2000
  • Oligotrophic bacteria isolated from forest soil showed a specific community consisting of various taxonomic groups compared with those in other soil or aquatic habitats. Based on the cell shape, the isolates were divided into four groups: regular rod, curved/spiral rod, irregular rod, and prosthecate bacteria. The cellular fatty acids 60 oligotrophic isolates were analyzed. The 30 fatty acids which were identified or characterized are classified. At the dendrogram based on cellular fatty acid composition, four clusters(I-IV) were separated at a euclidian distance of about 50. Cluster 3 and 4-a strains were containing Q-8, these strains are accommodated in the Proteobacteria gamma and beta subdivision. The chemotaxonomic profiles of the cluster 4-a strains showed good agreement with those of the genus Burkholderia. Cluster 3 was characterized by the presence of branched-chain fatty acids, iso-C15:0, iso-C17:1, and iso-C17:0 as the major components. These chemotaxonomy suggested the close relationship of the isolates with Xathomonas/Sterotrophomonas group. Based on the 16S rDNA sequence analysis, the two representative strains(MH256 and MA828) of cluster 3 showed the close relation to genera, Xathomonas/Sterotrophomonas, but were not included in these genera. These strains were even further away from core Xanthomonas, and clearly were seen to branch outside the cluster formed by the Sterotrophomonas maltophilia. MH256 and MA828 16S rDNA sequence was different enough to put new genus on a separate branch. The isolates with Q-10 were also studied. They are corresponded to the two large groups in Proteobacteria alpha subdivision. One was incorporated in the genus Bradyrhizobium cluster, which also includes Agromonas, a genus for oligotrophic bacteria. The strains of the other group showed high similarity to the genus Agrobacterium.

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Comparison of clustering methods of microarray gene expression data (마이크로어레이 유전자 발현 자료에 대한 군집 방법 비교)

  • Lim, Jin-Soo;Lim, Dong-Hoon
    • Journal of the Korean Data and Information Science Society
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    • v.23 no.1
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    • pp.39-51
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    • 2012
  • Cluster analysis has proven to be a useful tool for investigating the association structure among genes and samples in a microarray data set. We applied several cluster validation measures to evaluate the performance of clustering algorithms for analyzing microarray gene expression data, including hierarchical clustering, K-means, PAM, SOM and model-based clustering. The available validation measures fall into the three general categories of internal, stability and biological. The performance of clustering algorithms is evaluated using simulated and SRBCT microarray data. Our results from simulated data show that nearly every methods have good results with same result as the number of classes in the original data. For the SRBCT data the best choice for the number of clusters is less clear than the simulated data. It appeared that PAM, SOM, model-based method showed similar results to simulated data under Silhouette with of internal measure as well as PAM and model-based method under biological measure, while model-based clustering has the best value of stability measure.

A study onthe modeling of broadband access network for national information infrastructure and numerical analysis of its economics (초고속 액세스 망의 모델화 및 경제성에 대한 검토)

  • 정해원;박기식;노장래;조성준
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.22 no.12
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    • pp.2806-2818
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    • 1997
  • It is generallyaccepted that broadband access technologies will play an important role in the National Information Infrastructure. However, the provision of direct fibers to residential and small business customers has always been considered a challenge. To accelerage the provision of Broadband Access Facilities, alternatibe paths could be identified and actaivated in parallel. In this paepr, we present an overview of the alternative access technologies focusing on xDSL, FTTx, HFC, HFR, and suggest the modeling of the access netetwork systems which is using of the technologies. Also to investigate the economics of each access systems, we derve the numerical equations which is summed up the al parameter including the labor cost of the model system. The proposed equation has a variable which is the cell size (or subsciber clusters) and calculate the real cost values which is normalized by the copper cable unit cost. From the numerical resutls, we conclude that the economic access method to provide these broadband capabilities is depended on the subscriber penetration, the patterns of subscriber distribution density and existing communication infrastructures. It can be expected that our analytical model and equations provides an elegant solution to choose the optimal broadband access technologies to residential and small business customers.

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Malignant Retroperitoneal Paraganglioma in a Siberian Tiger (시베리아 호랑이에서 발생한 악성후복막부신경절종 증례)

  • Shin, Sang-Kyung;Park, Byung-Min;Youm, So-Young;Kim, Tae-Wang;Na, Ki-Jeong;Ahn, Byeong-Woo
    • Journal of Veterinary Clinics
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    • v.28 no.5
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    • pp.522-525
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    • 2011
  • A 14 year old female Siberian tiger presented for postmortem examination. A large mass attached to sublumbar area was found to be circumscribing aorta with metastases to mesenteric lymph nodes, uterus, kidney, adrenal gland, lung and thymus. The tumor cells were arranged in clusters or nests separated by well-developed fibrovascular stroma. The individual cells were plump and polygonal with granular eosinophilic cytoplasms and had distinct cell borders. The tumor cells were positive for synaptophysin, chromogranin A and neuron-specific enolase, and negative for cytokeratins, S100 and glial fibrillary acidic protein. The primary tumor was diagnosed as a malignant retroperitoneal paraganglioma.

Plant Regeneration from Cambium Callus of Ailanthus altissima Swingle (가중나무의 형성층(形成層) Callus에서 식물체(植物體) 재분화(再分化))

  • Lee, Sang Goo;Park, Young Goo
    • Journal of Korean Society of Forest Science
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    • v.78 no.4
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    • pp.412-418
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    • 1989
  • The stem segments of Ailanthus altissima were cultured on the Murashige & Skoog's medium(1962) supplemented with 0.1 mg/l BAP and 1.0 mg/l 2, 4-D for callus induction and proliferation, Shoot primordia were observed as greenish regions on the surface of yellow-brown calli about 8 weeks after culture. Shoot primordia were selected and transferred to the MS media containing various combination of BAP and 2, 4-D. Among these combinations the shoot primordia cell clusters on the medium added to 0.5mg/l BAP and 0.01mg/l 2, 4-D exhibited the highest number of shoot formation. These shoots were successfully transferred on the solid MS medium with no growth regulators for the rootings.

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Complete genome sequence of Cohnella sp. HS21 isolated from Korean fir (Abies koreana) rhizospheric soil (구상나무 근권 토양으로부터 분리된 Cohnella sp. HS21의 전체 게놈 서열)

  • Jiang, Lingmin;Kang, Se Won;Kim, Song-Gun;Jeong, Jae Cheol;Kim, Cha Young;Kim, Dae-Hyuk;Kim, Suk Weon;Lee, Jiyoung
    • Korean Journal of Microbiology
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    • v.55 no.2
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    • pp.171-173
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    • 2019
  • The genus Cohnella, which belongs to the family Paenibacillaceae, inhabits a wide range of environmental niches. Here, we report the complete genome sequence of Cohnella sp. HS21, which was isolated from the rhizospheric soil of Korean fir (Abies koreana) on the top of Halla Mountain in the Republic of Korea. Strain HS21 features a 7,059,027 bp circular chromosome with 44.8% GC-content. Its genome contains 5,939 protein-coding genes, 78 transfer RNA (tRNA) genes, 27 ribosomal RNA (rRNA) genes, 4 noncoding RNA genes (ncRNA), and 90 pseudogenes. The bacterium contains antibiotic-related gene clusters and genes encoding plant cell wall-degrading enzymes.

Inactivation of the genes involved in histone H3-lysine 4 methylation abates the biosynthesis of pigment azaphilone in Monascus purpureus

  • Balakrishnan, Bijinu;Lim, Yoon Ji;Suh, Jae-Won;Kwon, Hyung-Jin
    • Journal of Applied Biological Chemistry
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    • v.62 no.2
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    • pp.157-165
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    • 2019
  • Di- and tri-methylation of lysine 4 on histone H3 (H3K4me2 and H3K4me3, respectively) are epigenetic markers of active genes. Complex associated with Set1 (COMPASS) mediates these H3K4 methylations. The involvement of COMPASS activity in secondary metabolite (SM) biosynthesis was first demonstrated with an Aspergillus nidulans cclA knockout mutant. The cclA knockout induced the transcription of two cryptic SM biosynthetic gene clusters, leading to the production of the cognate SM. Monascus spp. are filamentous fungi that have been used for food fermentation in eastern Asia, and the pigment Monascus azaphione (MAz) is their main SM. Monascus highly produces MAz, implying that the cognate biosynthetic genes are highly active in transcription. In the present study, we examined how COMPASS activity modulates MAz biosynthesis by inactivating Monascus purpureus cclA (Mp-cclA) and swd1 (Mp-swd1). For both ${\Delta}Mp-cclA$ and ${\Delta}Mp-swd1$, a reduction in MAz production, accompanied by an abated cell growth, was observed. Suppression of MAz production was more effective in an agar culture than in the submerged liquid culture. The fidelity of the ${\Delta}Mp-swd1$ phenotypes was verified by restoring the WT-like phenotypes in a reversion recombinant mutant, namely, trpCp: Mp-swd1, that was generated from the ${\Delta}Mp-swd1$ mutant. Real-time quantitative Polymerase chain reaction analysis indicated that the transcription of MAz biosynthetic genes was repressed in the ${\Delta}Mp-swd1$ mutant. This study demonstrated that MAz biosynthesis is under the control of COMPASS activity and that the extent of this regulation is dependent on growth conditions.

Naringenin inhibits pacemaking activity in interstitial cells of Cajal from murine small intestine

  • Kim, Hyun Jung;Kim, Byung Joo
    • Integrative Medicine Research
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    • v.6 no.2
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    • pp.149-155
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    • 2017
  • Background: Naringenin (NRG) is a common dietary polyphenolic constituent of fruits. NRG has diverse pharmacological activities, and is used in traditional medicine to treat various diseases including gastrointestinal (GI) disorders. Interstitial cells of Cajal (ICCs) are pacemaker cells of the GI tract. In this study, the authors investigated the effects of NRG on ICCs and on GI motility in vitro and in vivo. Methods: ICCs were dissociated from mouse small intestines by enzymatic digestion. The whole-cell patch clamp configuration was used to record pacemaker potentials in cultured ICC clusters. The effects of NRG on GI motility were investigated by calculating percent intestinal transit rates (ITR) using Evans blue in normal mice. Results: NRG inhibited ICC pacemaker potentials in a dose-dependent manner. In the presence of tetraethylammonium chloride or iberiotoxin, NRG had no effect on pacemaker potentials, but it continued to block pacemaker potentials in the presence of glibenclamide. Preincubation with SQ-22536 had no effect on pacemaker potentials or on their inhibition by NRG. However, 1H-[1,2,4]oxadiazolo[4,3-a]quinoxalin-1-one blocked pacemaker potential inhibition by NRG. In addition, L-NG-nitroarginine methyl ester blocked pacemaker potential inhibition by NRG. Furthermore, NRG significantly suppressed murine ITR enhancement by neostigmine in vivo. Conclusion: This study shows NRG dose-dependently inhibits ICC pacemaker potentials via a cyclic guanosine monophosphate/nitric oxide-dependent pathway and $Ca^{2+}$-activated $K^+$ channels in vitro. In addition, NRG suppressed neostigmine enhancement of ITR in vivo.

Secondary Phase and Defects in Cu2ZnSnSe4 Solar Cells with Decreasing Absorber Layer Thickness

  • Kim, Young-Ill;Son, Dae-Ho;Lee, Jaebaek;Sung, Shi-Joon;Kang, Jin-Kyu;Kim, Dae-Hwan;Yang, Kee-Jeong
    • Current Photovoltaic Research
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    • v.9 no.3
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    • pp.84-95
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    • 2021
  • The power conversion efficiency of Cu2ZnSnSe4 (CZTSe) solar cells depends on the absorber layer thickness; however, changes in the characteristics of the cells with varying absorber layer thickness are unclear. In this study, we investigated the changes in the characteristics of CZTSe solar cells for varying absorber layer thickness. Five absorber thicknesses were employed: CZTSe1 2.78 ㎛, CZTSe2 1.01 ㎛, CZTSe3 0.55 ㎛, CZTSe4 0.29 ㎛, and CZTSe5 0.15-0.23 ㎛. The efficiency of the CZTSe solar cells decreased as the absorber thickness decreased, resulting in power conversion efficiencies of 10.45% (CZTSe1), 8.67% (CZTSe2), 7.14% (CZTSe3), 3.44% (CZTSe4), and 1.54% (CZTSe5). As the thickness of the CZTSe absorber layer decreased, the electron-hole recombination at the grain boundaries and the absorber-back-contact interface increased. This caused an increase in the current loss, owing to light loss in the long-wavelength region. In addition, as the thickness of the CZTSe absorber layer decreased, more ZnSe was produced, and the resulting defects and defect clusters led to an open-circuit voltage loss.