• 제목/요약/키워드: Catechol.

검색결과 408건 처리시간 0.027초

Comparative Homology Modeling and Ligand Docking Study of Human Catechol-O-Methyltransferase for Antiparkinson Drug Design

  • Lee, Jee-Young;Kim, Yang-Mee
    • Bulletin of the Korean Chemical Society
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    • 제26권11호
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    • pp.1695-1700
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    • 2005
  • Catechol-O-methyltransferase (COMT, EC 2.1.1.6) is an S-adenosylmethionine (SAM, AdoMet) dependent methyltransferase, and is related to the functions of the neurotransmitters in various mental processes, such as Parkinson’s disease. COMT inhibitors represent a new class of antiparkinson drugs, when they are coadministered with levodopa. Based on x-ray structure of rat COMT (rCOMT), the three dimensional structure of human COMT (hCOMT) was constructed by comparative homology modeling using MODELLER. The catalytic site of these two proteins showed subtle differences, but these differences are important to determine the characterization of COMT inhibitor. Ligand docking study is carried out for complex of hCOMT and COMT inhibitors using AutoDock. Among fifteen inhibitors chosen from world patent, nine models were energetically favorable. The average value of heavy atomic RMSD was 1.5 $\AA$. Analysis of ligand-protein binding model implies that Arg201 on hCOMT plays important roles in the interactions with COMT inhibitors. This study may give insight to develop new ways of antiparkinson drug.

곰취 Polyphenol oxidase의 효소화학적 성질 (Some characteristics of Ligularia fischeri polyphenol oxidase)

  • 함승시
    • Applied Biological Chemistry
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    • 제35권3호
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    • pp.170-172
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    • 1992
  • Sephadex G-150 column chromatography에 의해 부분 정제된 곰취 polyphenol oxidase의 최적 pH와 최적온도는 7.5와 $25^{\circ}C$였으며, pH 7.5에서 5분간 처리시에는 $40^{\circ}C$에서 안정하였으나, 30분간 처리시에는 $70^{\circ}C$에서 약 90% 실활하였다. polyphenol oxidase는 ascorbic acid와 potassium cyanide(0.5mM)에 의해 불활성화 덕었으며, L-Lysine, glutathione (0.5 and 1mM), ascorbic acid와 potassium cyanide(1mM)에서는 완전 실활하였다. catechol과 chlorogenic acid의 기질은 높은 특이성을 나타낸 반면 dopamine은 7.4%로서 가장 낮았다.

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The 2,3-Dihydroxybiphenyl 1,2-Dioxygenase Gene (phnQ) of Pseudomonas sp. DJ77: Nucleotide Sequence, Enzyme Assay, and Comparison with Isofunctional Dioxygenases

  • Kim, Seong-Jae;Shin, Hee-Jung;Park, Yong-Chjun;Kim, Young-Soo;Min, Kyung-Hee;Kim, Young-Chang
    • BMB Reports
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    • 제32권4호
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    • pp.399-404
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    • 1999
  • 2,3-Dihydroxybiphenyl 1,2-dioxygenase (2,3-DHBD), which catalyzes the ring meta-cleavage of 2,3-dihydroxybiphenyl, is encoded by the phnQ gene of biphenyl- and phenanthrene-degrading Pseudomonas sp. strain DJ77. We determined the nucleotide sequence of a DNA fragment of 1497 base pairs which included the phnQ gene. The fragment lncluded an open reading frame of 903 base pairs to accommodate the enzyme. The predicted amino acid sequence of the enzyme subunit consisted of 300 residues. In front of the gene, a sequence resembling an E. coli promoter was identified, which led to constitutive expression of the cloned gene in E. coli. The deduced amino acid sequence of the PhnQ enzyme exhibited 85.6% identity with that of the corresponding enzyme in Sphingomonas yanoikuyae Q1 (formerly S. paucimobilis Q1) and 22.1% identity with that of catechol 1,2,3-dioxygenase from the same DJ77 strain. PhnQ showed broader substrate preference than previously-cloned PhnE, catechol 2,3-dioxygenase. Ten amino acid residues, considered to be important for the role of extradiol dioxygenases, were conserved.

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Effects of Intravenous Administration of Taurocholic Acid on Hepatic Catechol-O-Methyltransferase Activity in Rats with Choledocho-Caval Shunt

  • ;;;곽춘식
    • 대한의생명과학회지
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    • 제13권2호
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    • pp.135-140
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    • 2007
  • The possible mechanism of decreased catechol-O-methyltransferase (COMT) activity in cholestatic rat liver was studied. Hepatic and serum COMT activities were determined from the experimental rats with choledocho-caval shunt (CCS). The Michaelis-Menten constants in this hepatic enzyme was also measured. The activities of cytosolic, mitochondrial and mircosomal COMT as well as their $V_{max}$ values were found to be decreased significantly in CCS plus taurocholic acid (TCA) injected group than in the control group, such as CCS alone groups. However, their $K_m$ values in the experimental groups did not vary. Seru4m COMT activity increased slightly in the CCS plus TCA injerted group than in the control group. The above results suggest that TCA represses biosynthesis of the COMT in the liver, The elevated activity of the serum COMT is believed to be caused by the increment of membrane permeability of hepatocytes upon TCA mediated liver cell necrosis.

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Construction of a Bioluminescent Reporter Using the luc Gene and meta-Cleavage Dioxygenase Promoter for Detection of Catecholic Compounds

  • Park, Sang-Ho;Lee, Dong-Hun;Oh, Kye-Heon;Kim, Chi-Kyung
    • Journal of Microbiology
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    • 제38권3호
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    • pp.183-186
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    • 2000
  • Several types of bioluminescent reporter strains have been developed for the detection and monitoring of pollutant aromatics contaminating the environment. In this study, a bioluminescent reporter strain, E. coli SHP3, was constructed by fusing the luc gene of firefly luciferase with the promoter of pcbC responsible for the meta-cleavage of aromatic hydrocarbons. the bioluminescence expressed by the luc gene in the reporter was well triggered by the promoter when it was exposed to 2,3-dihydroxybiphenyI (2,3-DHBP) at 0.5 to 1 mM concentrations. The bioluminescent response was more extensive when the reporter strain was exposed to 5 mM catechol and 2 mM 4-chlorocatechol. These different types of bioluminescent responses by E. coli SHP3 appeared to be characterized by the nature of the aromatics to stress. Since E. coli SHP3 responded to 2,3-DHBP quite sensitively, this reporter strain could be applied for detecting some catecholic pollutants.

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Agrobacterium tumefaciens와 Tumor-inducing 플라스미드에 의한 virulence 유전자의 발현 (Effects of Agrobacterium tumefaciens and Tumor-inducing plasmid on the virulence gene expression)

  • 음진성
    • 한국정보통신학회논문지
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    • 제15권4호
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    • pp.1000-1006
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    • 2011
  • 본 연구에서는 vir유전자의 발현에 있어서 페놀화합물, Ti 플라스미드들의 종류(cctopine, nopaline), A. tumefaciens 들의 영향에 대해서 조사하였다. 9종류의 페놀화합물들을 3종류의 A. tumefaciens들과 3종류의 Ti 플라스미드들을 대상으로 조사하였다. Nopaline Ti 플라스미드를 포함하는 A. tumefaciens MW107에 존재하는 vir유전자는 4-hydroxyacetophenone, phenol, catechol, resorcinol, acetosyringone과 vanillin등 6종류의 페놀화합물들에 의해서 상대적으로 높게 발현되었다. Octopine Ti 플라스미드들을 포함하는 A. tumefaciens MW105와 MW108의 vir유전자들은 acetosyringone에서만 발현되었다. 따라서 vir유전자의 발현을 유도시키는 요인들은 Ti 플라스미드 종류, A. tumefaciens와 페놀화합물들의 종류에 따라서 서로 다르다는 결과를 얻었다.

Stenotrophomonas maltophilia LK-24의 페놀분해 관련 효소 (Analysis of Enzymes of Stenotrophomonas maltophilia LK-24 Associated with Phenol Degradation)

  • Kim, Jeong-Dong;Kang, Kook-Hee
    • 한국미생물·생명공학회지
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    • 제32권1호
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    • pp.37-46
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    • 2004
  • Stenotrophomonas maltophilia LK-24가 페놀화합물을 분해하는데 관련된 효소들과 페놀의 분해 산물을 분석한 결과 phenol hydrolase, catechol-2.3-dioxygenase, 2-hydroxymuconic semialdehyde dehydrogenase, 2-hydroxymuconic semialdehyde hydroxylase, 및 acetaldehyde dehydrogenase를 확인하였다. 이러한 효소들의 활성으로 보아 페놀은 meta-pathway ring cleavage를 거치면서 분해되는 것으로 사료된다. 이러한 결과는 페놀화합물의 metabolic pathways를 이해하는데 많은 도움이 되며, phenolic-contaminated waste streams에 S. maltophilia LK-24를 사용할 수 있으리라 여겨진다.

화이트바이오텍기반 방향족화합물 개발에 관한 연구동향 (Research Trend about the Development of White Biotech-Based Aromatic Compounds)

  • 이진호
    • 한국미생물·생명공학회지
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    • 제37권4호
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    • pp.306-315
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    • 2009
  • 원유의 고갈, 반복되는 에너지 위기 및 지구온난화 문제에 기인하여 석유 대신 재생가능한 바이오매스를 사용하여 방향족 화학원료를 개발하는 연구가 광범위하게 진행되고 있다. 특히, 바이오테크놀로지를 이용한 포도당으로부터 방향족아미노산 생합성경로 중간대사체 및 그 유도체 합성기술은 벤젠유래 화합물을 포함한 많은 방향족 석유화학원료를 대체할 가능성이 있는 기술들이 개발되고 있다. 본 고는 미생물 대사공학, 생물전환, 화학공정 기술을 이용하여 hydroquinone, catechol, adipic acid, shikimic acid, gallic acid, pyrogallol, vanillin, p-hydroxycinnamic acid, p-hydroxystyrene, p-hydroxybenzoic acid, indigo, indole 3-acetic acid와 같은 방향족화합물을 어떻게 개발하고 있는지를 논하였다. 또한, 경쟁력있는 화이트바이오텍기반 방향족화합물 생산기술을 개발하기 위한 문제점 및 해결방안등을 논했다.