• Title/Summary/Keyword: Biomedical Information

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Applications of Digital Holography in Biomedical Microscopy

  • Kim, Myung-K.
    • Journal of the Optical Society of Korea
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    • v.14 no.2
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    • pp.77-89
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    • 2010
  • Digital holography (DH) is a potentially disruptive new technology for many areas of imaging science, especially in microscopy and metrology. DH offers a number of significant advantages such as the ability to acquire holograms rapidly, availability of complete amplitude and phase information of the optical field, and versatility of the interferometric and image processing techniques. This article provides a review of the digital holography, with an emphasis on its applications in biomedical microscopy. The quantitative phase microscopy by DH is described including some of the special techniques such as optical phase unwrapping and holography of total internal reflection. Tomographic imaging by digital interference holography (DIH) and related methods is described, as well as its applications in ophthalmic imaging and in biometry. Holographic manipulation and monitoring of cells and cellular components is another exciting new area of research. We discuss some of the current issues, trends, and potentials.

Numerical Study on the Sub-Voxel Tracking Using Micro-Beads in a 3.0 T MRI (3.0 T MRI 환경에서 마이크로비드를 이용한 서브복셀 추적에 관한 수치해석적 연구)

  • Han, Byung-Hee;Lee, Soo-Yeol
    • Journal of Biomedical Engineering Research
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    • v.28 no.1
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    • pp.102-107
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    • 2007
  • In molecular imaging studies via magnetic resonance imaging, in vivo cell tracking is an important issue for the observation of cell therapy or disease behavior. High resolution imaging and longitudinal study are necessary to track the cell movement. Since the field inhomogeneity extends over several voxels, we have performed the numerical analysis using the sub-voxel method dividing a voxel of MR image into several elements and the information about the field inhomogeneity distribution around the micro-beads. We imbedded ferrite-composite micro-beads with the size of $20-150{\mu}m$ in the subject substituted for cells to induce local field distortion. In the phantom imaging with the isotropic voxel size of $200{\mu}m^3$, we could confirm the feasibility of sub-voxel tracking in a 3.0 T MRI.

Etv5, a transcription factor with versatile functions in male reproduction

  • Eo, Jinwon;Song, Haengseok;Lim, Hyunjung Jade
    • Clinical and Experimental Reproductive Medicine
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    • v.39 no.2
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    • pp.41-45
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    • 2012
  • Transcription factors govern diverse aspects of cell growth and differentiation as major switches of gene expression. Etv5, a member of the E26 transformation-specific family of transcription factors, has many stories to share when it comes to reproduction. Etv5 deficient mice show complex infertility phenotypes both in males and females. In males, the infertility phenotype exhibited by Etv5 deficiency is sexually dimorphic, and it involves both somatic cells and germ cells. In $Etv5^{-/-}$ female mice, the problem is more complicated by hormonal involvement. This review synthesizes old and new information on this versatile transcription factor-from the inadvertent discovery of its role in the testes to its newly discovered role in maintaining spermatogonial stem cells.

Understanding Disease Susceptibility through Population Genomics

  • Han, Seonggyun;Lee, Junnam;Kim, Sangsoo
    • Genomics & Informatics
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    • v.10 no.4
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    • pp.234-238
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    • 2012
  • Genetic epidemiology studies have established that the natural variation of gene expression profiles is heritable and has genetic bases. A number of proximal and remote DNA variations, known as expression quantitative trait loci (eQTLs), that are associated with the expression phenotypes have been identified, first in Epstein-Barr virus-transformed lymphoblastoid cell lines and later expanded to other cell and tissue types. Integration of the eQTL information and the network analysis of transcription modules may lead to a better understanding of gene expression regulation. As these network modules have relevance to biological or disease pathways, these findings may be useful in predicting disease susceptibility.

Impedance Tomography using Internal Current Density Distribution Measured by Nuclear Magnetic Resonance (자기공명촬영상에서 구한 내부 전류밀도를 이용한 임피던스 단층촬영법)

  • Lee, Su-Yeol;U, Eung-Je;Mun, Chi-Ung
    • Journal of Biomedical Engineering Research
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    • v.15 no.4
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    • pp.413-418
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    • 1994
  • In electrical impedance tomography (EIT), we use boundary current and voltage measurements to provide the information about the cross-sectional distribution of electrical impedance or resistivity One of the major problems in EIT has been the inaccessibility of internal voltage or current data in finding the internal impedance values. We propose a new image reconstruction method using internal current density data measured by NMR. We obtained a two-dimensional current density distribution within a phantom by processing the real and imaginary MR images from a 4.7T NMR machine. We implemented a resistivity image reconstruction algorithm using the finite element method and sensitivity matrix. We presented computer simulation results of the image reconstruction algorithm and furture direction of the research.

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New Sound Spectral Analysis of Prosthetic Heart Valve (인공판막음의 새로운 스펙트럼 분석 연구)

  • Lee, H.J.;Kim, S.H.;Chang, B.C.;Tack, G.;Cho, B.K.;Yoo, S.K.
    • Proceedings of the KOSOMBE Conference
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    • v.1997 no.11
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    • pp.75-78
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    • 1997
  • In this paper we present new sound spectral analysis methods or prosthetic heart valve sounds. Phonocardiograms(PCG) of prosthetic heart valve were analyzed in order to derive frequency domain feature suitable or the classification of the valve state. The fast orthogonal search method and MUSIC (MUltiple SIgnal Classification) method are described or finding the significant frequencies in PCG. The fast orthogonal search method is effective with short data records and cope with noisy, missing and unequally-spaced data. MUSIC method's key to the performance is the division of the information in the autocorrelation matrix or the data matrix into two vector subspaces, one a signal subspace and the other a noise subspace.

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Evaluation of HRV spectrum variation to Color light and Music stimulation (음악과 색채조명 자극에 의한 HRV 스펙트럼의 변화에 관한 연구)

  • Kim, J.H.;Jung, D.S.;Son, K.H.;Kim, N.G.
    • Proceedings of the KOSOMBE Conference
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    • v.1998 no.11
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    • pp.137-138
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    • 1998
  • The purpose of this study is to evaluate the HRV(Heart Rate Variability) to visual and auditory stimulation. We analysed psychological effect and HRV of music, light, and music with light. The results show that HRV pattern is significantly related to the psychological effect, and HRV spectrum is useful to extract more information when various stimulation are presented.

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Evaluation of Stimulus Strategy for Cochlear Implant Using Neurogram (Neurogram을 이용한 인공와우 자극기법 평가 연구)

  • Yang, Hyejin;Woo, Jihwan
    • Journal of Biomedical Engineering Research
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    • v.34 no.2
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    • pp.47-54
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    • 2013
  • Electrical stimulation is delivered to auditory nerve (AN) through the electrodes in cochlear implant system. Neurogram is a spectrogram that includes information of neural response to electrical stimulation. We hypothesized that the similarity between a neurogram and an input-sound spectrogram could show how well a cochlear implant system works. In this study, we evaluated electrical stimulus configuration of CIS strategy using the computational model. The computational model includes stochastic property and anatomical features of cat auditory nerve fiber. To evaluate similarity between a neurogram and an input-sound spectrogram, we calculated Structural Similarity Index (SSIM). The results show that the dynamic range and the stimulation rate per channel influenced SSIM. Finally, we suggested the optimal configuration within the given stimulus CIS. We expect that the results and the evaluating procedure could be employed to improve the performance of a cochlear implant system.

Development of Real-Time Ventricular Fibrillation Detection System based on DSP Processor (DSP 기반의 실시간 심실세동 검출 시스템 개발)

  • Song, Mi-Hye;Jang, Bong-Ryeol;Lee, Kyoung-Joung
    • Proceedings of the IEEK Conference
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    • 2006.06a
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    • pp.873-874
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    • 2006
  • In this paper, we have developed a ventricular fibrillation detection system based on DSP processor. The developed system was able to detect VF in real time correctly and quickly. We compared the performance of the floating point simulation with that of fixed point simulation. The computational cost of fixed point simulation was remarkably reduced than that of floating point simulation.

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Efficient Generation of Human IgG1 Light Kappa Constant Region Knock-in Mouse by CRISPR/Cas9 System

  • Jung, Sundo
    • Biomedical Science Letters
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    • v.25 no.4
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    • pp.372-380
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    • 2019
  • Mice with specific modified genes are useful means of studying development and disease. The CRISPR/Cas9 system is a very powerful and effective tool for generating genetically modified mice in a simple and fast manner. To generate human IgG light kappa constant knock-in mice, we tested by microinjection of a mixture of Cas9 protein, single-guide RNA and target homologous recombinant donor DNA into zygotes. We found that the injection of 10 ng/μL of Cas9 protein and crRNA/tracrRNA, rather than single guide RNA, induced the production of knock-in mice more effectively. Thus, our study provides valuable information that will help to improve the production of knock-in mice and contribute the successful generation of humanized Ab-producing mice in Korea.