• Journal of Microbiology and Biotechnology
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• v.20 no.12
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• pp.1717-1723
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• 2010

The integrated fixed-film activated sludge (IFAS) system is a variation of the activated sludge wastewater treatment process, in which hybrid suspended and attached biomass is used to treat wastewater. Although the function and performance of the IFAS system are well studied, little is known about its microbial community structure. In this study, the composition and diversity of the bacterial community of suspended and attached biomass samples were investigated in a full-scale IFAS system using a high-throughput pyrosequencing technology. Distinct bacterial community compositions were examined for each sample and appeared to be important for its features different from conventional activated sludge processes. The abundant bacterial groups were Betaproteobacteria (59.3%), Gammaproteobacteria (8.1%), Bacteroidetes (5.2%), Alphaproteobacteria (3.9%), and Actinobacteria (3.2%) in the suspended sample, whereas Actinobacteria (14.6%), Firmicutes (13.6%), Bacteroidetes (11.6%), Betaproteobacteria (9.9%), Gammaproteobacteria (9.25%), and Alphaproteobacteria (7.4%) were major bacterial groups in the attached sample. Regarding the diversity, totals of 3,034 and 1,451 operational taxonomic units were identified at the 3% cutoff for the suspended and attached samples, respectively. Rank abundance and community analyses demonstrated that most of the diversity was originated from rare species in the samples. Taken together, the information obtained in this study will be a base for further studies relating to the microbial community structure and function of the IFAS system.

• Korean Journal of Soil Science and Fertilizer
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• v.46 no.6
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• pp.487-493
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• 2013

The effects of long-term fertilization on soil biological properties and microbial community structure in the plough layer in a rice paddy soil in southern Korea were investigated in relation to the continuous application of chemical fertilizers (NPK), straw based compost (Compost), combination these two (NPK + Compost) for last 40 years. No fertilization plot (Control) was installed for comparison. Though fertilization significantly improved rice productivity over control, the long-term fertilization of NPK and compost combination was more effective on increasing rice productivity and soil nutrient status than single application of compost or chemical fertilizer. All fertilization treatments had shown significant improvement in soil microbial properties, however, continuous compost fertilization markedly increased soil enzyme and microbial activities as compared to sole chemical fertilization. Results of microbial community structure, evaluated by EL-FAME (ester-linked fatty acid methyl esters) method, revealed big difference among Control, NPK, and Compost. However, both Compost and Compost+NPK treatments belonged to the same cluster after statistical analysis. The combined application of chemical fertilizer and organic amendments could be more rational strategy to improve soil nutrient status and promote soil microbial communities than the single chemical fertilizer or compost application.

• ALGAE
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• v.37 no.2
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• pp.85-103
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• 2022

Korea is one of the most advanced countries in kelp aquaculture. The brown algae, Undaria pinnatifida and Saccharina japonica are major aquaculture species and have been principally utilized for human food and abalone feed in Korea. This review discusses the diversity, population structure and genomics of kelps. In addition, we have introduced new cultivar development efforts considering climate change, and potential carbon sequestration of kelp aquaculture in Korea. U. pinnatifida showed high diversity within the natural populations but reduced genetic diversity in cultivars. However, very few studies of S. japonica have been conducted in terms of population structure. Since studies on cultivar development began in early 2000s, five U. pinnatifida and one S. japonica varieties have been registered to the International Union for the Protection of New Varieties of Plants (UPOV). To meet the demands for seaweed biomass in various industries, more cultivars should be developed with specific traits to meet application demands. Additionally, cultivation technologies should be diversified, such as integrated multi-trophic aquaculture (IMTA) and offshore aquaculture, to achieve environmental and economic sustainability. These kelps are anticipated to be important sources of blue carbon in Korea.

• Ocean and Polar Research
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• v.32 no.3
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• pp.269-289
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• 2010

In Summer 2008, a multidisciplinary survey was conducted onboard R/V Haeyang 2000 to understand plankton response to the three distinct physico-chemical settings that developed in the Ulleung Basin of the East Sea. Baseline settings of hydrographic conditions included the presence of the thin (<20 m) Tsushima Surface Water (TSW) on top of the Tsushima Middle Water (TMW). It extends from the Korea Strait to $37^{\circ}N$ along the $130^{\circ}E$ and then turns offshore and encompasses the relatively saline (T>$26^{\circ}C$, S>33.7) Ulleung Warm Eddy surface water centered at $36.5^{\circ}N$ and $131^{\circ}E$. A relatively colder and saline water mass appeared off the southeastern coast of Korea. It was accompanied by higher nutrient and chlorophyll-a concentrations, suggesting a coastal upwelling. Most of the offshore surface waters support low phytoplankton biomass (0.3 mg chl-a $m^{-3}$). A much denser phytoplankton biomass (1-2.3 mg $m^{-3}$) accumulated at the subsurface layer between 20-50 m depth. The subsurface chlorophyll-a maximum (SCM) layer was closely related to the nutricline, suggesting an active growth of phytoplankton at depth. The SCM developed at shallow depth (20-30 m) near the coast and deepened offshore (50-60 m). A fucoxanthin/zeaxanthin ratio was high in coastal waters while it was low in offshore waters, which indicated that diatoms dominate coastal waters while cyanobacteria dominate offshore waters. The community structure and biomass of phytoplanktonare closely related to nitrogen availability. Zooplankton biomass was higher in the coastal region than in the offshore region while species richness showed an opposite trend. Zooplankton community structure retained a coastal/offshore contrast. These suggest that summer hydrography is a stable structure, lasting long enough to allow a hydrography-specific plankton community to evolve.

• ALGAE
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• v.18 no.4
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• pp.365-369
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• 2003

Algal flora and community structure of benthic marine algae in the subtidal zone, Yeongil Bay area were studied. The number of algal species in the quadrats were identified totally 78: 2 Cyanophyta, 10 Chlorophyta, 19 Phaeophyta, and 47 Rhodophyta. The dominant species based on biomass were Sargassum hornerii, Undaria pinnatifida, and Sargassum thunbergii. Vertical distribution was clear by the representative algae such as, Undaria pinnatifida, Sargassum thunbergii, Sargassum horneri, Corallina spp. in the upper subtidal zone, Undaria pinnatifida, Sargassum horneri, Caulerpa okamurae in the middle zone, and Dictyopteris divaricata in the lower zone.

• Journal of Microbiology
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• v.43 no.3
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• pp.272-276
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• 2005

Bacillus subtilis ATCC 6633 was grown in BHIB medium supplemented with $Mn^{2+}$ for 96 h at $37^{\circ}C$ in a shaker incubator. After removing the microbial biomass, a lipopeptide biosurfactant was extracted from the supernatant. Its structure was established by chemical and spectroscopy methods. The structure was confirmed by physical properties, such as Hydrophile-Lipophile Balance (HLB), surface activity and erythrocyte hemolytic capacity. The critical micelle concentration (cmc) and erythrocyte hemolytic capacity of the biosurfactant were compared to those of surfactants such as SDS, BC (benzalkonium chloride), TTAB (tetradecyltrimethylammonium bromide) and HTAB (hexadecyltrimethylammonium bromide). The maximum hemolytic effect for all surfactants mentioned was observed at concentrations above cmc. The maximum hemolytic effect of synthetic surfactants was more than that of the biosurfactant produced by B. subtilis ATCC 6633. Therefore, biosurfactant would be considered a suitable surface-active agent due to low toxicity to the membrane.

• The Korean Journal of Malacology
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• v.6 no.1
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• pp.33-44
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• 1990

A study on the distribution and community structure of benthic molluscan shells of the northern coastal area in Cheju Island was carried out from July 1989 to June 1990. The benthic molluscan shells collected and identified were composed of 3 classes, 9 orders, 29 familes and 81 species. The first dominant species of the wpper intertidal zone of the northern coastal area in Cheju Island was Nodilittorina exigua and second dominant species were Heminerita japonica, Monodenta neritoides, Monodota neritoides, Littorina brevicula, those of middle intertidal zone were Lunella coronata coreensis, Monodonta neritoides and Omphalius rusticus. H. japonica, M. neritoides, O. rusticus, L. coronata coreensis and Niotha livescens were dominant in the lower intertidal zone, and Astralium haematragum was dominant in the infralittoral zone of within 60 feet sea water depth. The benthic molluscan standing biomass of intertidal and infralittoral zones were 145.71-705.55 gr/ /m sup 2 / and 84.57-1645.67 gr/m sup 2/ respectively, But thao among area and zones were apparently differences.

• Fisheries and Aquatic Sciences
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• v.26 no.7
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• pp.423-436
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• 2023

The objectives of this review were to synthesize the community structure of phytoplankton and the role of atelomix in the phytoplankton dynamics in Ethiopian highland lakes. Changes in a lake's physical structure, light dynamics, and availability of nutrients are closely associated with phytoplankton ecology, and phytoplankton assemblages provide insight into phytoplank- ton responses to these environmental changes. Based on the available information, a total of 173 species of phytoplankton are grouped under seven classes, Chlorophyceae (80 taxa), Bacillariophyceae (55 taxa), Cyanophyceae (24 taxa), Dinophyceae (6 taxa), Eugleonophyceae (6 taxa), Xanthophyceae (1 taxon), and Cryptophyceae (1 taxon) were recorded in five different tropical Ethiopian highland lakes. Chlorophyceae and Bacillariophyceae dominated in terms of species composition. Partial atelomixis, seasonality, and low nutrient concentrations seem to be the main drivers in structuring phytoplankton composition and abun-dances in Ethiopian highland lakes, characterized by a high diversity of atelomix-dependent benthic diatoms and desmids. Thus, this review will help understand the role of atelomix and nutrient availability in the phytoplankton composition and biomass of tropical highland lakes of Ethiopia.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.46 no.4
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• pp.413-423
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• 2013

To elucidate the variation of species composition, biomass and length distribution of flatfishes by the period and region in the Uljin marine ranching area, bottom trawl survey was investigated at the six stations from Feb. 2008 to Dec. 2010. During the survey period, a total 4 families 17 species in the Pleuronectiformes, average 69,158 $ind./km^2$ and 5,625 $kg/km^2$ were identified, in 2008 appeared in 14 species, average 25,798 $ind./km^2$ and 2,333 $kg/km^2$ and in 2009 appeared in 13 species, average 102,360 $ind./km^2$ and 5,634 $kg/km^2$ and in 2010 appeared in 14 species, average 75,704 $ind./km^2$ and 8,632 $kg/km^2$. The individual dominant species, occupying over 10% of total individuals, was Pleuronectes herzensteini (20,811 ind., 30.0%), Hippoglossoides pinetorum (18,666 ind., 26.9%) and Glyptocephalus stelleri (13,499 ind., 19.4%) also the biomass dominant species, occuping over 10% of total biomass, was P. herzensteini (2,207 kg, 39.3%), Pleuronectes yokohamae (857 kg, 15.3%), H. pinetorum (761 kg, 13.5%), Kareius bicoloratus (677 kg, 12.1%). From the cluster and MDS analysis based on Bray-Curtis similarity matrix of fourth root transformed data of species number and individuals in the Uljin marine ranching area from Feb. 2008 to Dec. 2010 was divided into two different groups of the flatfishes community in 2008 and from Jan. to Apr. in 2009 and 2010 (Group A) and the pleuronectiform community in from May to Dec. in 2009 and 2010 (Group B). From the cluster and MDS analysis using the similarity of demersal organisms community among six stations, the Uljin marine ranching area was divided into two different groups of Group 1 (St. 1 and St. 3) and Group 2 (St. 2, St. 4, St. 5 and St. 6).

• Ocean and Polar Research
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• v.31 no.2
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• pp.199-212
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• 2009

The community structure of meiofauna was surveyed from six stations in sand mining area near around Sungapdo, Taean five times from April-December, 2007. Ten meiofaunal taxa in total, comprising 5-9 taxa per station were recovered. Nematodes were dominant from four stations in April and from five stations in May. In June, copepods were dominant from all stations except station two, from which sarcomastigophorans were predominant. Copepods were also dominant from three stations in October and four stations in December. The mean density of meiofauna per $10\;cm^{-2}$ was the highest in October (130 individuals) and lowest (68 individuals) in April. Meiofauna mean biomass per $100\;cm^{-2}$ was $3.80-75.26{\mu}gC$ from each station, with the monthly mean biomass being lowest in April ($11.97{\mu}gC$) and highest in October ($39.50{\mu}gC$). The highest biomass was recorded at station five in October ($75.26{\mu}gC$). Eleven families of harpacticoid copepods occurred Ameiridae and Ectinosomatidae were the most frequent. The mean diversity index was 1.21 from all the stations, 1.22 from the sand mining stations, and 1.19 from the reference stations. The nematode:copepod (N/C) ratio was 1.57 from the sand mining stations and 1.37 from the reference stations. Non-metric multidimensional scaling analysis divided the community into group A (station one, non-sand mining and reference area) and groups B and C in the sand mining area. The present study reports similar numbers of taxa but lower density and biomass of meiofauna compared to previous studies in Korean waters. The variability of the diversity index and N/C ratio may indicate large fluctuation of meiofauna depending on temporal and spatial conditions of the environment in the study area.