• ALGAE
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• v.33 no.2
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• pp.167-180
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• 2018

Benthic diatoms are ubiquitous in tidal flats and play major roles in maintaining coastal ecosystems. Spatio-temporal variations in diatom diversity have not been well-studied, mainly because of difficulties in morphological identification and the lack of appropriate genetic tools. To overcome these problems, we used the gene encoding the ribulose bisphosphate carboxylase large-subunit (rbcL) as a molecular marker, and sequenced these genes with the aid of the MiSeq platform. In this manner, we explored the genetic diversity of benthic diatoms in tidal flats of Guenso Bay on the west coast of Korea; differences in the spatial distributions of benthic diatoms were evident. The diatom communities were dominated by Nitzschia, Navicula, and Amphora; their relative distributions were affected by the sand proportion, grain size, and air exposure time. Our results suggest that meta-barcoding of the rbcL gene and next-generation sequencing can be used to explore the diversity of benthic diatoms.

• ALGAE
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• v.35 no.4
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• pp.361-373
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• 2020

The community dynamics of benthic diatoms in the hypersaline environment are investigated to advance our understanding how salinity impacts marine life. Diatoms were sampled in the two salterns encompassing salt Ponds, ditches, and seawater reservoirs (n = 11), along the salinity gradient (max = 324 psu), and nearby tidal flats (n = 2). The floral assemblages and distributions across sites and stations showed great variations, with a total of 169 identified taxa. First, not surprisingly, higher diversity of benthic diatoms was found at natural tidal flats than salterns. The saltern diatoms generally showed salinity dependent distributions with distinct spatial changes in species composition and dominant taxa. Biota-environment and principal component analysis confirmed that salinity, mud content, and total nitrogen were key factors influencing the overall benthic community structure. Some dominant species, e.g., Nitzschia scalpelliformis and Achnanthes sp. 1, showed salinity tolerance / preference. The number of diatom species at salinity of >100 psu reduced over half and no diatoms were found at maximum salinity of 324 psu. The highest salinity for the observed live diatoms was 205 psu, however, a simple regression indicated a theoretical salinity threshold of ~300 psu on the survival. Finally, the indicator species were identified along the salinity gradient in salterns as well as natural tidal flats. Overall, high species numbers, varying taxa, and euryhaline distributions of saltern diatoms collectively reflected a dynamic saltern ecosystem. The present study would provide backgrounds for biodiversity monitoring of ecologically important microalgal producers in some unique hypersaline environment, and elsewhere.

• Korean Journal of Environmental Biology
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• v.29 no.1
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• pp.17-22
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• 2011

The distributional pattern of benthic diatoms in tidal flats of Hampyeong Bay, Korea, was studied from January to October in 2009. As benthic diatoms of Hampyeong Bay tidal flats, 45 species were identified, and the most dominant species was Paralia sulcata. The most diverse flora was observed at Gaip and Songseok sites in April with 22 species, and the least at Hyeonhwa site in January. The ranges of chlorophyll-a concentration in tidal flats were 21.2~31.8 mg$m^{-2}$ at Hyeonhwa site, 23.6~35.4 mg $m^{-2}$ at Gaip site, and 24.2~34.3 mg $m^{-2}$ at Songseok site. The concentrations of pheopigment ranged between 25.3 and 45.2 mg$m^{-2}$. The standing crops of benthic diatoms showed highest density in April and lowest in January, February, and October. The cell volumes of benthic diatoms were highest in April. The taxa and biomass of benthic diatoms showed correlations with temperature. On temperature variables, the benthic diatoms showed optimal occurrences at the range of $14{\sim}17^{\circ}C$.

• Korean Journal of Environmental Biology
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• v.31 no.4
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• pp.295-301
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• 2013

The diversity and biomass distribution of benthic diatom flora at tidal flats of Hampyeong Bay were studied from 2006 to 2013 as a part of KLTER Program. A total of 83 species (77 strains in 2006, 65 strains in 2007, 41 strains in 2008, 45 strains in 2009, 54 strains in 2010, 55 strains in 2011, 56 strains in 2012 and 40 strains in 2012) were identified as benthic diatoms of Hampyeong Bay tidal flats. The most dominant species were Paralia sulcata and Cyclotella litoralis. Cyclotella sp., Diploneis sp., Entomoneis alata, Gyrosigma sp., Navicula abunda, Navicula gregaria, Navicula spp. and Nitzschia palea were the other common species which contributed to the high benthic diatom biomass in the Bay. The diversity of benthic diatoms varied according to the sample stations and seasons. The highest diversity was observed in August samples. The range of chlorophyll- a concentration in sediments of tidal flats for 8 years was 21~65 mg $m^{-2}$. The standing crops of benthic diatoms varied according to the studied stations and sampled seasons. The number of taxa and standing crops showed decreasing tendency year after year from all sampled stations. The distributions of standing crops and cell volumes of benthic diatoms showed similar pattern. The taxa and biomass of benthic diatoms showed low correlation coefficients with temperature variables expressed as the following equations $Y=-0.0208X^2+0.5264X+19.529(r^2=0.0269)$ and $Y=-0.9181X^2+27.011X+310.07(r^2=0.0797)$ respectively.

• Proceedings of the Korea Society of Environmental Biology Conference
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• 2004.05a
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• pp.33-33
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• 2004

• The Korean Journal of Ecology
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• v.8 no.1
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• pp.21-29
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• 1985

The physico-chemical properties of sediment, the species composition and biomass of benthic diatoms were investigated in the intertidal zone of Kum river estuary, from July 1983 to May 1984. Sandflat sediment was more oligotrophic than mudflat one. The diatom composition was primarily associated with sediment grain size. The dominant epipelic diatoms belonged to the centric diatoms such as Paralia sulcata and Thalassiosira spp., while the epipsammic diatoms consisted mainly of Achnanthes haukiana and Amphora sabyii. Diatom flora of sandflat was more significantly diverse than that of mudflat. Mean yearly crop of sandflat diatoms was 2.8 times greater than that of mudflat diatoms and peaked at March reflecting the greater availability of ammonia.

• Preventive Nutrition and Food Science
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• v.13 no.3
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• pp.166-175
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• 2008

In this study, we focused on natural water-soluble antioxidants from the Jeju benthic diatoms, Achnanthes longipes, Navicula sp. and Amphora coffeaeformis. They were prepared by enzymatic digestion using five carbohydrases (Viscozyme, Celluclast, AMG, Termamyl and Ultraflo) and five proteases (Protamex, Kojizyme, Neutrase, Flavourzyme and Alcalase) and their potential antioxidant activity was assessed. Among the enzymatic digests, Neutrase digest from A. coffeaeformis exhibited the highest effect in DPPH radical scavenging. Flavourzyme (48.7%), Viscozyme (47.4%) and Celluclast (45.7%) digests from Navicula sp. exhibited higher $O^{{\cdot}-}_2$ radical scavenging activity. Viscozyme digest from A. coffeaeformis (45.9%) possessed the highest effects in hydroxyl radical scavenging. Termamyl (89.3%) and Protamex (88.8%) digests from A. coffeaeformis had strong metal chelating activity. Lipid peroxidation was significantly inhibited in Termamyl and Kojizyme digests from A. longipes, AMG and Termamyl digests from Navicula sp. and Kojizyme digest from A. coffeaeformisi. These data suggest that enzymatic digests of the Jeju benthic diatoms might be valuable sources of antioxidant which can be applied in food and pharmaceutical industry.

• Journal of Ecology and Environment
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• v.37 no.4
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• pp.257-270
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• 2014

In a survey of periphytic and benthic diatoms in Korea, diatoms of genus Stauroneis were found to be widely distributed over freshwaters, rivers and streams, lakes and reservoir, wetlands in lowland and mountain areas, and even subaerial terrestrial habitats. However, it is clear that Stauroneis diatoms prefer peatlands, which can be more or less acidic or oligotrophic environments in freshwaters. In this study, Staurones diatoms were collected mainly from mountain peatlands. Twenty five taxa were confirmed to be species, while some specimens remain unidentified. Approximately twenty species have been reported in Korea in the past, but these are largely S. anceps Ehremberg sensu lato, S. phoenicenteron (Nitzsch) Eherenberg sensu lato, and their infraspecies variety or forma. Sixteen of the twenty five Stauroneis taxa found in this survey are reported for the first time in Korea.

• ALGAE
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• v.24 no.1
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• pp.47-55
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• 2009

Recently, interest in plant-derived food additives has developed natural antioxidants, in order to alternate syn-thetic antioxidants with several disadvantages. In the present study, different organic fractions from solvent parti-tions of 80% methanol extract from Jeju benthic diatoms, Achnanthes longipes, Navicula sp. and Amphora coffeaeformis was assessed for their potential antioxidant effects. Among the solvent fractions tested, n-hexane (80.4%) and 80% methanol extract (76.6%) from A. longipes, chloroform (63.2%) from Navicula sp. and n-hexane (67.4%) from A. cof-feaeformis were effective in DPPH free radical scavenging. Fractions of chloroform (53.4%) and n-hexane (53.1%) from A. longipes exhibited higher activities on $H_2O_2$ scavengin. Fraction of n-Hexane from A. longipes exhibited the highest hydroxyl radical scavenging activity and NO. scavenging activity (56.5% and 75.6%, respectively). Aqueous residue from A. coffeaeformis (75.6%) showed the highest metal chelating effect. chloroform and ethyl acetate frac-tion of all the diatoms exhibited significant antioxidant activities in lipid peroxidation inhibitory activity. In particu-lar, both chloroform and the ethyl ecetate fraction from A. longipes and A. coffeaeformis exhibited lipid peroxidation inhibitory activity significantly higher than that of $\alpha$- tocopherol. These data suggest that the Jeju benthic diatoms tested are rich in hydrophilic and hydrophobic antioxidative compounds with different antioxidative properties that can be applied in food industry.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.36 no.6
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• pp.591-595
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• 2003

Settlement of larvae, growth, and survival of juvenile abalone (Haliotis discus hannai) were examined after feding of 5 species of benthic diatoms (Cocconeis suctellum, Navicula sp Nitzschia longissima Bacillavia paxillifera, Licmophora flabellata). All of the benthic diatoms were isolated from natural populations on plastic plates for the abalone. The settlement of larvae, shell growth, and survival rate of juvenile abalone varied by diatoms species. The highest settlement rate of larvae was $43.1\%$ with the Cocconeis suctellum diet. Daliy growth rate reached a maximum at 64.1 ${\mu}m/day$ with the Navicula sp. diet and a minimum at 22.4 ${\mu}m/day$ with the Licmophora flabellata diet. Survival rate of the juvenile abalone was highest at $62.0\%$ with the Navicula sp., Cocconeis suctellum , and Nitzschia longissima diets. Survival rate of the Juvenile abalone was significantly higher than the control group with mixed diatom population diets (P<0.05). Therefore, diatom . species composition in diets can be a controling factor for the settlement, growth, and survival rates of Juvenile abalone.