• Title/Summary/Keyword: Bayesian reconstruction

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Colletotrichum fructicola, a Member of Colletotrichum gloeosporioides sensu lato, is the Causal Agent of Anthracnose and Soft Rot in Avocado Fruits cv. "Hass"

  • Fuentes-Aragon, Dionicio;Juarez-Vazquez, Sandra Berenice;Vargas-Hernandez, Mateo;Silva-Rojas, Hilda Victoria
    • Mycobiology
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    • v.46 no.2
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    • pp.92-100
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    • 2018
  • The filamentous Ascomycota Colletotrichum gloeosporioides sensu lato is a fungus that has been reported worldwide as a causal agent of anthracnose disease in avocado and other crops. In Mexico, this species affects fruits from an early stage of development in the orchard until the post-harvest stage. Although fungicides are continuously applied to control Colletotrichum species, pericarp cankers and soft rot mesocarp in fruits are still frequently observed. Considering the lack of a precise description of the causative agent, the aim of the current study was to determine the pathogens involved in this symptomatology. Twenty-four isolates were consistently obtained from the pericarp of avocado fruits cv. "Hass" collected in the central avocado-producing area of Mexico. Morphological features such as colony growth, conidia size, and mycelial appressorium were assessed. Bayesian multilocus phylogenetic analyses were performed using amplified sequences of the internal transcribed spacer region of the nuclear ribosomal DNA; actin, chitin synthase, glyceraldehyde-3-phosphate dehydrogenase partial genes; and APn2-Mat1-2 intergenic spacer and mating type Mat1-2 partial gene from the nine selected isolates. In addition, fruits were inoculated with a conidial suspension and reproducible symptoms confirmed the presence of Colletotrichum fructicola in this area. This pathogenic species can now be added to those previously reported in the country, such as C. acutatum, C. boninense, C. godetiae, C. gloeosporioides, and C. karstii. Disease management programs to reduce the incidence of anthracnose should include C. fructicola to determine its response to fungicides that are routinely applied, considering that the appearance of new species is affecting the commercial quality of the fruits and shifting the original population structure.

Study on Compressed Sensing of ECG/EMG/EEG Signals for Low Power Wireless Biopotential Signal Monitoring (저전력 무선 생체신호 모니터링을 위한 심전도/근전도/뇌전도의 압축센싱 연구)

  • Lee, Ukjun;Shin, Hyunchol
    • Journal of the Institute of Electronics and Information Engineers
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    • v.52 no.3
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    • pp.89-95
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    • 2015
  • Compresses sensing (CS) technique is beneficial for reducing power consumption of biopotential acquisition circuits in wireless healthcare system. This paper investigates the maximum possible compress ratio for various biopotential signal when the CS technique is applied. By using the CS technique, we perform the compression and reconstruction of typical electrocardiogram(ECG), electromyogram(EMG), electroencephalogram(EEG) signals. By comparing the original signal and reconstructed signal, we determines the validity of the CS-based signal compression. Raw-biopotential signal is compressed by using a psuedo-random matrix, and the compressed signal is reconstructed by using the Block Sparse Bayesian Learning(BSBL) algorithm. EMG signal, which is the most sparse biopotential signal, the maximum compress ratio is found to be 10, and the ECG'sl maximum compress ratio is found to be 5. EEG signal, which is the least sparse bioptential signal, the maximum compress ratio is found to be 4. The results of this work is useful and instrumental for the design of wireless biopotential signal monitoring circuits.

A Real-time Particle Filtering Framework for Robust Camera Tracking in An AR Environment (증강현실 환경에서의 강건한 카메라 추적을 위한 실시간 입자 필터링 기법)

  • Lee, Seok-Han
    • Journal of Digital Contents Society
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    • v.11 no.4
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    • pp.597-606
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    • 2010
  • This paper describes a real-time camera tracking framework specifically designed to track a monocular camera in an AR workspace. Typically, the Kalman filter is often employed for the camera tracking. In general, however, tracking performances of conventional methods are seriously affected by unpredictable situations such as ambiguity in feature detection, occlusion of features and rapid camera shake. In this paper, a recursive Bayesian sampling framework which is also known as the particle filter is adopted for the camera pose estimation. In our system, the camera state is estimated on the basis of the Gaussian distribution without employing additional uncertainty model and sample weight computation. In addition, the camera state is directly computed based on new sample particles which are distributed according to the true posterior of system state. In order to verify the proposed system, we conduct several experiments for unstable situations in the desktop AR environments.

Sulzbacheromyces sinensis, an Unexpected Basidiolichen, was Newly Discovered from Korean Peninsula and Philippines, with a Phylogenetic Reconstruction of Genus Sulzbacheromyces

  • Liu, Dong;Wang, Xin Yu;Wang, Li Song;Maekawa, Nitaro;Hur, Jae-Seoun
    • Mycobiology
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    • v.47 no.2
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    • pp.191-199
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    • 2019
  • Most of lichens are formed by Ascomycota, less than 1% are lichenized Basidiomycota. The flora investigation of lichenized Ascomycota of South Korea has been well studied in the past three decades; however, prior to this study, none of basidiolichens was discovered. During the recent excursion, an unexpected clavarioid basidiolichen, Sulzbacheromyces sinensis was collected. Morphology and ecology has been recorded in detail. DNA was extracted, and ITS, 18S, 28S nuclear rDNA were generated. In order to further confirm the systematic position of the Korean specimens, maximum likelihood and Bayesian inference analysis including all the species of the order Lepidostromatales were conducted based on the ITS. As a result, the phylogenetic tree of the order Lepidostromatales was reconstructed, which differed from the previous studies. The inferred phylogenetic tree showed that species of Sulzbacheromyces in three different continents (Asia, South Africa and South America) were separated into three clades with support. In this study, the species worldwide distribution map of Lepidostromatales was illustrated, and S. sinensis had a widest distribution range (paleotropical extend to the Sino-Japanese) than other species (paleotropical or neotropical). Prior to this study, the range of distribution, southernmost and northernmost points and the fruiting time of S. sinensis were recorded, and the genus Sulzbacheromyces was firstly reported from Korean peninsula and Philippines.