• Plant Resources
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• v.1 no.2
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• pp.92-97
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• 1998

An isolate of barley yellow mosaic virus(BaYMV-HN) obtained from Haenam, Korea was compared with two BaYMV strains. BaYMV-Ⅱ-1 from Japan and BaYMV-G from Germany. The sequence of the 3'-terminal 3817nucleotides[excluding the poly (A) tail] of RNA 1 of BaYMV-HN was determined to start within a long open reading frame coding for a part of the NIa-VPg polymerase(26 amino acids). NIa-Pro polymerase (343 amino acids), NIb polymerase(528 amino acids) and the entire capsid protein(297 amino acids), which is followed by a noncoding region(NCR) of 235 nucelotides. In the partial ORFs, BaYMV-HN shows higher sequence homology with BaYMV-Ⅱ-1(99.5%) than BaYMV-G(92.7%). The 3' non-coding regions of BaYMV-HN(235nt) shows higher nucleotide sequence homology with BaYMV-G(235nt)(99.6%) than BaYMV-Ⅱ-1(231nt)(97.0%). The 3' NIa-Pro protein sequence of BaYMV-HN shows higher amino acid sequence homology with BaYMV-Ⅱ-1(95.0%) than BaYMV-G(93.6%), but, NIb protein sequence of BaYMV-HN shows same all amino acid sequence. The capsid protein sequence of BaYMV-HN(297aa) shows same with BaYMV-Ⅱ-1, and shows higher nucleotide sequence homology with BaYMV-UK (from United Kingdom)(97.3%) than BaYMV-G(96.9%) and G2(96.9%). Difference of capsid protein amino acid were 0-9 between the Japan, United Kingdom and Germany and were 2-6 between all Korean isolates. Many of the amino acid differences are located in the N-terminal regions of the capsid proteins from 1 to 74 amino acid positions.

• Korean Journal Plant Pathology
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• v.14 no.1
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• pp.62-67
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• 1998

Barley yellow mosaic virus (BaYMV-HN) occurring Haenam area was isolated by mechanical inoculation onto barley cultivars, purification and production of antibody. BaYV-HN were purified from infected plants a filamentous virus with 13 nm in diameter and 250∼300 nm and 500∼650 nm in length. Specific antibody made by injecting the purified virus to the muscle of a rabbit. In gel-diffusion tests antibody to BaYMV-HN did not make spur with tow Japanese BaYMV isolates BaYMV-II-1 or BaYMV-III. BaYMV-HN showed the symptom of yellowing and necrosis in host plants. Mechanical inoculation tests with Japanese barley cultivars showed that BaYMV-HN infected New Golden, Akagi Nijo and Tosan Kawa 73, but did not infect Amagi Nijo, Haruna Nijo, Ishukushirazu (ym3), Misato Golden (Ym1), Kashimamugi, Joshushiro Hadaka and Mokusekko 3 (ym1). In Korean barley cultivars, some of the naked barleys which are Hinssalbori, Kinssalbori, Saessalbori and Saechalssalbori were not infected by BaYMV-HN. However, it infected all the covered barley cultivars and the beer barley cultivars. BaYMV-HN had two RNAs, RNA 1 (7.6 Kb) and RNA 2 (3.5 Kb), and one coat protein (33 KDa).

• Korean Journal Plant Pathology
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• v.14 no.4
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• pp.314-318
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• 1998

Using the reverse transcription polymerase chain reaction (RT-PCR), a rapid and sensitive assay method for the detection and identification of barley yellow mosaic virus (BaYMV) and barley mild mosaic virus (BaMMV) was adapted. Two units of primers from each virus were selected and used for the determination of two different viruses. PCR fragments of BaYMV (ca. 0.9kb) and BaMMV (ca. 0.8kb) were obtained from the designed method for the assay of BaYMV and BaMMV coat protein. PT-PCR fragments were cloned using vector pT7 Blue and the sequences of the selected clones were analyzed. coat protein of BaYMV and that of BaMMV consisted of 297 amino acids (891 nucleotides) and 251 amino acids (753 nucleotides), respectively. The snalysis of coat protein genes from these two viruses showed that 45.6% of nucleotides sequence ad 34.9% of amino acid in BaYMV were homologous to those in BaMMV.

• Korean Journal of Plant Resources
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• v.14 no.3
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• pp.286-294
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• 2001

Soil-borne barley viruses were investigated in 42 regions during 1999-2003, in Korea. BaYMV, BaMMV and SbWMV symptoms were found in 37 regions. Crops resistance to mosaic viruses were investigated by growing them on 10 regions infected with soil-borne viruses. It was found that 10 unhulled barley, 6-beer bar]ey, 16 rye and 2 wheat species showed resistance to virus. Most of 15 Japanese cultivars showed infection symptoms but many of them showed relatively higher resistance in Ikasan, Youngkwang and Yesan areas region. Mixed virus infection was investigated and it was found that inter-regional species except in 10 areas, were mix infected with BaYMV and BaMMV. But in Youngkwang area all of crop species except Secheon-6 were infected only with BaYMV. Japanese cultivars were mixed infected with BaMMV and BaYMV except at Yesan that were infected only with BaYMV.

• Korean Journal Plant Pathology
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• v.13 no.2
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• pp.118-124
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• 1997

The two viruses of barley yellow mosaic(BaYMV) and barley mild mosaic virus (BaMMV) were detected by ELISA from barley plants with virus-like symptoms which were collected from 16 locations in southern Korea, during 1995 and 1996. Both viruses occurred in southern Korea. Barley plants at Chongdo and Koseong were infected with BaMMV, while those infected with BaYMV were at Kurye and Taegu. After sowing 50 barley cultivars at habitually infected fields in 10 locations, the susceptibility and resistance to BaYMV and BaMMV were screened with antiserum tests. The cultivars of Albori, Alchanbori, Daejinbori, Jokangbori, Milyangbori, Boeunkwamek, Naehanssalbori, Olssalbori, Weossalbori, Dusan 29 and Deogndohyangchonkwa showed positive reaction to BaYMV antiserum, while Saeolbori, Chalbori, Jinjukwa and Baegjinkwa showed positive reaction to BaMMV. Nonsankwa 1-6 and wheat cultivars of Chongkeymil, Dahongmil, Grumil, Urimil, Jochonhomil, Sinkeyhomil showed negative reactions to both viruses. The rest cultivars were infected both with BaYMV and BaMMV. Sap inoculations to barleyplants with the two viruses of BaYMV isolated in Haenam and BaMMV isolated at National Honam Agricultural Station, expressed lower infection rate than those grown in the virus-infected fields.

• Research in Plant Disease
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• v.23 no.1
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• pp.65-68
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• 2017

Barley yellow mosaic virus (BaYMV), which is transmitted by the root-inhabiting protist Polymyxa graminis, causes a soil-borne disease. In this study, we detected BaYMV from soil using two-step nested polymerase chain reaction (PCR). Specific primers based on a coat protein region of BaYMV segment RNA1 were used in the first round of amplification. Based on the sequenced amplicon, an inner primer was designed for the second round of amplification. A PCR product of 372 bp exhibited 98%-100% nucleotide sequence identity with the coat protein region of BaYMV segment RNA1. In this study, we propose an easy method for the detection of BaYMV from soil, may considerably assist in accurate fungus-transmitted virus diagnosis and subsequent disease forecasting. This is the first report on the detection of BaYMV from soil.

• Korean Journal of Organic Agriculture
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• v.23 no.4
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• pp.859-866
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• 2015

Virus disease surveys on barley cultivation areas in Jeonnam Jeonbuk Gyungnam Gyungbuk-do were conducted during 2014-2015. In this study, we detected Barley yellow mosaic virus (BaYMV), Barley mild mosaic virus (BaMMV) and Soil-borne wheat mosaic virus (SBWMV) by RT-PCR from barley leaves. These viruses are of great economic importance for wheat and barley, causing significant quantitative and qualitative losses in yield. The result of investigation showed that the field incidence of BaYMV in Buan, Gimje was more than 90% in 2014. The infection field rate of barley virus including Boseong, Gangjin, Haenam, Jangheung in Jeonnam was ${\approx}$ 30%. In 2014, double infections by BaYMV and BaMMV was detected in Boseong, Gangjin, Haenam and Jangheung. Only as a low rate BaYMV occurred in various fields of Jeonbuk in 2015. At the same time high infection field ratio of 70% was observed in Gunsan. Also in Yeonggwang was double infection of BaYMV and BaMMV. BaYMV occurred single infection has been confirmed in all of the study area of Gyungbuk and Gyungnam except for Goseong during the investigation period.

• KOREAN JOURNAL OF CROP SCIENCE
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• v.50 no.3
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• pp.197-204
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• 2005

The major symptom such as yellowish and mosaic spots in overwintering barley were mostly caused by viruses such as Barley yellow mosaic virus (BaYMV) and Barley mild mosaic virus (BaMMV) in the nation-wide for four years. The result showed that more than $78\%$ collected samples were infected by the viruses. The incidence of Ba YMV was more than $70\%$, and relatively uniformly distributed in the southern regions of barley fields in Korea. However the incidence of BaYMV in Gyeonggi Province was as low as $19\%$ compared to $65\~85\%$ in the rest of regions. Occurrence of BaMMV varied depending on investigated regions such as $20\~40\%$ in Jeonbuk, Jeonnam, Gangwon and Gyeongnam, and a lower infection in Gyeongbuk, Chungnam and Gyeonggi Provinces. In this result, $60\%$ of BaMMV was found to be in the southwest regions of Korea such as Jeonbuk and Jeonnam Provinces. Over all, both BaYMV and BaMMV were thought to be dominantly casual agents in overwintering barley by either solely or mixed infections. Soil-borne wheat mosaic virus(SBWMV) occurred at most $14\%$ in Gyeonggi and Barley yellow dwarf virus-MAY (BYDV­MAV) was found only one place in Jeonbuk, suggesting that SBWMV and BYDV-MAV were not significant diseases in Korea. Exotic genetic resources that possess different resistant genes to BaYMV and BaMMV were tested to identify the responses to the viruses occurred in Iksan. According to the ELISA results, BaYMV and BaMMV were infected in some plant materials but SBWMV was not identified. Any resistant gene was not effective to BaYMV-Ik (Insan strain) and BaMMY. Ishukushirazu (rym 3) and Chosen (rym 3), Tokushima Mochi Hadaka (rym 4y) and Hakei 1-41 (rym 5a) showed resistant response with little symptoms to BaYMY. The other five accessions possessing rym 1+5, rym 2, rym 4m, rym 5 and rym 9, respectively, were resistant to BaMMV. Various symptoms were observed in the tested plant materials such as not only yellowish and mosaic symptoms mostly but also necrotic spot, tissue necrosis, leaf stripe and leaf curling. However, it was difficult to find any relationship between resistant genes and specific symptoms.

• KOREAN JOURNAL OF CROP SCIENCE
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• v.48 no.6
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• pp.501-505
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• 2003

The growth characteristics and damage of naked barley infected with barley yellow mosaic virus (BaYMV) were investigated between resistant and susceptible varieties in habitual field plot of BaYMV BaYMV of the barley plants with typical disease symptom were identified by enzyme linked immunosorbent assay (ELISA) test. The visual degree (0-9) based on disease symptoms of BaYMV was different as 9 and 1 between susceptible variety Baegdong and resistant variety Naehanssalbori, respectively. Susceptible variety, Baegdong showed significant damage in culm length, number of kernel per spike and tiller per square meter but not in 1,000 kernel weight, so these results caused yield reduction to only 80% comparing to the control. Seed germination did not affected by BaYMV infection both in susceptible and resistant variety. In grain quality test, abortive grain yale and crude protein content were significantly increased compared to the control. The relationships between BaYMV infection and growth characteristics showed the negative correlations in culm length, number of tiller, 1000 kernel weight and yield, but it showed the positive correlation in crude protein contents. These results implied that BaYMV can affect not only barley growth and yield but grain quality.

• Plant Resources
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• v.2 no.2
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• pp.69-74
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• 1999

A rapid and sensitive assay for specific detection and identification of barley yellow mosaic virus(BaYMV) was set up using the reverse transcriptase polymerase chain reaction(RT-PCR). A couple of primers was select to discriminate the viruses. PCR fragments of BaYMV(ca.0.9 kb) were obtained by using the method designed for BaYMV capsid protein. RT-PCR fragments were cloned with vector pT7 Blue and the resulting clones were sequenced. Capsid protein of BaYMV consisted of 297 amino acids and 891 nucleotides. The capsid protein sequence of BaYMV showed that 98% of nucleotides and 99% of amino acids homology.