• Development and Reproduction
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• v.27 no.2
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• pp.67-75
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• 2023

Polymeric immunoglobulin receptor (pIgR) mediates the transfer of polymeric immunoglobulin to protect organisms and is one of the most important mucosal effectors. In this study, the developmental stage- and tissue-specific expression of pIgR were observed before virus inoculation in olive flounder. pIgR was gradually expressed until the formation of immune tissue, exhibiting high expression in the late juvenile period; thereafter, pIgR expression gradually decreased and exhibited high expression in the spleen and skin. Moreover, pIgR expression after viral hemorrhagic septicemia virus infection was high in the kidney and spleen tissues at high density and low at low density. The results of this study can provide a basis for future studies on breeding density, virus expression, and immune system studies in fish.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.56 no.4
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• pp.380-387
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• 2023

Stocking density is associated with Paralichthys olivaceus growth; thus, fish should be rapidly reared at high densities for commercial reasons. Studies have reported that high stocking density retards growth; however, few have investigated the malformations caused by stocking density stress. This study compared the growth and malformation rates of P. olivaceus at different densities and stress- and immune-related gene expression between malformed and normal fish. Forty days post-hatching, fish (total length, 1.49±0.02 cm) were reared at 800 (low density; LD), 1500 (medium density; MD), and 4000 (high density; HD) fish/m², and the growth rate was measured weekly. On day 30, RNA was extracted from the kidneys, and the expression of stress-, immune-, and malformation-related genes was analyzed using qRT-PCR. The malformation rate in the HD groups was approximately three times higher (62%) than that in the LD and MD groups (approximately 20%), and growth was lower regarding length and weight. The stress-related (HSP70 and GPX) and immune-related (PIR and IgM) genes showed higher mRNA expression in the HD group and malformed fish than in the LD group and normal fish. However, TLR3 showed the opposite results. In summary, high stocking density suppressed growth and increased malformation risk in P. olivaceus.

• Journal of Environmental Science International
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• v.30 no.2
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• pp.191-194
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• 2021

This study aimed to provide information and data for the management of insect breeding farms by identifying the appropriate density when rearing Protaetia brevitarsis larvae. The breeding box of the insects was filled with 2 L of fermented sawdust on a 50 × 35 × 15 cm sheet of plastic, and the density of the treatments was 200, 300 and 400 P. brevitarsis in the first, second, and third larval stages. Each treatment was repeated five times, and the sawdust medium was replaced three times (10 intervals). The experiments were conducted for a total of 30 days from March 1, 2020. Overall, 200 P.brevitarsis in the first, second, and third larval stages reared in the breeding box had a higher average survival rate and lower average mortality rate, thereby contributing to efficient production. In conclusion, this result suggests a way to increase production efficiency through the environmental management of insect breeding farms.

• Asian-Australasian Journal of Animal Sciences
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• v.24 no.2
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• pp.162-172
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• 2011

In this paper, simulation was used to determine accuracies of genomic breeding values for polygenic traits associated with many thousands of markers obtained from high density genome scans. The statistical approach was based upon stochastically simulating a pedigree with a specified base population and a specified set of population parameters including the effective and noneffective marker distances and generation time. For this population, marker and quantitative trait locus (QTL) genotypes were generated using either a single linkage group or multiple linkage group model. Single nucleotide polymorphism (SNP) was simulated for an entire bovine genome (except for the sex chromosome, n = 29) including linkage and recombination. Individuals drawn from the simulated population with specified marker and QTL genotypes were randomly mated to establish appropriate levels of linkage disequilibrium for ten generations. Phenotype and genomic SNP data sets were obtained from individuals starting after two generations. Genetic prediction was accomplished by statistically modeling the genomic relationship matrix and standard BLUP methods. The effect of the number of linkage groups was also investigated to determine its influence on the accuracy of breeding values for genomic selection. When using high density scan data (0.08 cM marker distance), accuracies of breeding values on juveniles were obtained of 0.60 and 0.82, for a low heritable trait (0.10) and high heritable trait (0.50), respectively, in the single linkage group model. Estimates of 0.38 and 0.60 were obtained for the same cases in the multiple linkage group models. Unexpectedly, use of BLUP regression methods across many chromosomes was found to give rise to reduced accuracy in breeding value determination. The reasons for this remain a target for further research, but the role of Mendelian sampling may play a fundamental role in producing this effect.

• Journal of Ecology and Environment
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• v.30 no.4
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• pp.341-346
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• 2007

Nest density was determined and tree and soil characteristics around Nycticorax nycticorax breeding sites and non-breeding sites on Bamsum Island in Seoul were analyzed from May 2005 to October 2006 to identify breeding site preferences of N. nycticorax and the effects of N. nycticorax nesting density on nesting tree structure and soil characteristics. N. nycticorax preferred trees of low height ($3.5{\sim}6$ m) and small diameter at breast height in high density Salix communities. Excrement of heron juveniles was dropped on the soil under the nests. The soil nutrient content under nests (P: 126.0 mg/kg, N: 202.8 mg/kg, EC: 549 ${\mu}S/cm$, pH 4.7) was much higher than that of control soils from Bamsum Island not enriched by heron excrement (P: 41.5 mg/kg, N: 42.0 mg/kg, EC: 342 ${\mu}S/cm$, pH 5.1). Formation of Salix communities on the shores of Bamsum Island is ongoing, and their structure has been directly influenced by annual flooding. After flooding, the nutrient content differences between heron-affected soils and control soils were not significant. This might be the reason that Salix communities on Bamsum were not affected by nesting herons as in other terrestrial communities where herons nest. This result indicates that flooding plays an important role in sustaining Salix communities on Bamsum Island where herons nest. The results of this study may increase understanding of N. nycticorax breeding behavior which may be useful for conservation planning.

• Journal of the Korean Society of Environmental Restoration Technology
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• v.17 no.5
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• pp.43-49
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• 2014

Fairy Pittas use the forest around the valley and Gotjawal as breeding places. This survey was conducted to investigate the characteristic of earthworms, specifically its population density, body size around the breeding site in Gotjawal and the forest around the valley areas from the middle of July to the end of July 2013. A total of 405 individual earthworms were collected in the 100 small established quadrats, in which 315 were found in Gotjawal and 90 were found in the forest around the valley area. The density of earthworms in Gotjawal was significantly higher compared to that forest around the valley area. It was also observed that the body size of earthworms was significantly different between Gotjawal and the forest around the valley area. Proportion of number of individuals which are larger than 7cm in body size was 43%(n=135) in Gotjawal and 84%(n=76) in the forest around the valley area, respectively. Soil area was not important factor to the density of earthworms. We suggest that Gotjawal can be considered as a suitable breeding site for Fairy Pitta because of the richness of its primary food in this area.

• Journal of Environmental Science International
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• v.31 no.4
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• pp.369-372
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• 2022

This study was conducted to determine the injury type and frequency of bearded dragons during single and group breeding according to stocking density, for 16 weeks. A total of 14 bearded dragons compromising three groups were selected for this study. Six and four bearded dragons bred in a cage of 45 cm × 45 cm × 45 cm were designed as group A and B, respectively. Group C was made of four partitions (20 cm × 20 cm × 20 cm) of equal size in the kennel, and the dragons, four in number, were reared alone. Injury type criteria were given 1 score each in 6 stages. Most of the injury types in group A were primary tail cutting, which was 1 point, depending on the score, except for 4 scores. The injury type of group A varied, that is 1, 2, 3, and 5 scores, and the pattern lasted for 2 to 9 weeks. After 10 weeks, the dragons showed no response to injury type, except 4 scores at 11 weeks and 2 scores at 14 weeks with a frequency of one, respectively. The representative injury types of the group B were primary tail cutting, which was 1 point, and the scores of the injury type from 2 to 11 weeks were the highest; the frequency of occurrence at 1 and 2 scores was 5 times and 3 times, respectively, and the frequency of occurrence at 3 scores was twice. In addition, 5 scores were found to have the lowest frequency of occurrence. Solitary breeding showed no response to the type of injury for 16 weeks. Consequently, single breeding with an appropriate stocking density did not affect stress, and it could be expected a positive aspect for pet welfare.

• Animal Bioscience
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• v.34 no.4
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• pp.482-488
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• 2021

Objective: This study was conducted to estimate effect of single nucleotide polymorphisms (SNP) on the estimated breeding value of Hungarian Grey (HG) bulls and to find markers associated with horn colour. Methods: Genotypes 136 HG animals were determined on Geneseek high-density Bovine SNP 150K BeadChip. A multi-locus mixed-model was applied for statistical analyses. Results: Six SNPs were identified to be associated (-log10P>10) with green and white horn. These loci are located on chromosome 1, 3, 9, 18, and 25. Seven loci (on chromosome 1, 3, 6, 9, 10, 28) showed considerable association (-log10P>10) with the estimated breeding value. Conclusion: Analysis provides markers for further research of horn colour and supplies markers to achieve more effective selection work regarding estimated breeding value of HG.

• Korean Journal of Environment and Ecology
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• v.22 no.3
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• pp.332-337
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• 2008

This study was conducted to clarify the differences in bird communities in breeding season between coniferous forests of Mt. Namsan and Gwangneung areas from April to August 2006. We chose a study site of 10ha in size for territory mapping of breeding bird community in each area. There were significant difference in DBH distribution of trees and average foliage profiles between both study areas. Number of breeding species and pairs, breeding density, and bird species diversity were higher in Gwangneung area than in Mt. Namsan area. Number of bird species and breeding pairs belonged to hole and canopy guild were different between both study areas. The difference in breeding bird communities between both study areas may be related with forest structure. For the protection and management of birds, greater structural complexity would be needed in Mt. Namsan area.

• Development and Reproduction
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• v.25 no.4
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• pp.235-244
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• 2021

Interferon Regulatory Factor 3 (IRF3) is a member of interferon-regulated transcription factor family and is known to play an important role in the innate immune response against viral infections. In this study, the expression of IRF3 in different tissues, developmental stages, and stocking densities of olive flounder was investigated. The expression of IRF3 was observed to gradually increase in early-stage juvenile fish. The highest expression was observed in later-stage juvenile fish when immune tissues were formed. High IRF3 expression was observed in the muscles and the brain tissues. The expression of IRF3 was observed in fish at different stocking densities after viral hemorrhagic septicemia virus (VHSV) infection. It yielded an interesting expression pattern in the muscles and the brain tissues of fish stocked at low density. These observations can be used as basic data for the study of the expression of immune response-related genes against viruses based on stocking density and immune systems in other fish species.