• Title/Summary/Keyword: Automated Program

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Microsatellite multiplex PCR method for selective breeding studies in Pacific abalone (Haliotis discus hannai) (북방전복 (Haliotis discus hannai)의 선발육종 연구를 위한 microsatellite multiplex PCR법 개발)

  • Park, Choul Ji;Nam, Won Shik;Lee, Myeong Seok;Kang, Ji-Yun;Kim, Kyung Kil
    • The Korean Journal of Malacology
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    • v.30 no.4
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    • pp.383-390
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    • 2014
  • The multiplex PCR system including six microsatellites from Haliotis discus hannai, consisting of dinucleotide and trinucleotide repeat units, is developed. The six loci were coamplified in a single reaction employing dye-labeled primers. Alleles from these loci were sized using an internal standard by automated sample processing in an ABI3100 Genetic Analyser. Amplified alleles in profiles containing selected microsatellites were typed clearly, providing easily interpretable results. In this results suggest that the presented multiplex PCR system may be a useful tool in a selective breeding program of H. discus hannai in which genetic identification will allow different genotypes to be reared together from fertilization. This should have a great impact as it will make selective breeding more efficient. Moreover, it will be useful in a variety of applications, including strain and hybrid identification, parentage assignment, pedigree reconstruction, estimating genetic diversity and/or inbreeding.

Tissue Microarrays in Biomedical Research

  • Chung, Joon-Yong;Kim, Nari;Joo, Hyun;Youm, Jae-Boum;Park, Won-Sun;Lee, Sang-Kyoung;Warda, Mohamad;Han, Jin
    • Bioinformatics and Biosystems
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    • v.1 no.1
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    • pp.28-37
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    • 2006
  • Recent studies in molecular biology and proteomics have identified a significant number of novel diagnostic, prognostic, and therapeutic disease markers. However, validation of these markers in clinical specimens with traditional histopathological techniques involves low throughput and is time consuming and labor intensive. Tissue microarrays (TMAs) offer a means of combining tens to hundreds of specimens of tissue onto a single slide for simultaneous analysis. This capability is particularly pertinent in the field of cancer for target verification of data obtained from cDNA micro arrays and protein expression profiling of tissues, as well as in epidemiology-based investigations using histochemical/immunohistochemical staining or in situ hybridization. In combination with automated image analysis, TMA technology can be used in the global cellular network analysis of tissues. In particular, this potential has generated much excitement in cardiovascular disease research. The following review discusses recent advances in the construction and application of TMAs and the opportunity for developing novel, highly sensitive diagnostic tools for the early detection of cardiovascular disease.

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Development of an Automated Control System for Bioreactor using the Plant Tissue Culture (식물조직배양용 바이오리액터의 농도제어 시스템 개발)

  • Chung, Seok-Hyun;No, Daehyun;Kang, Changho;Kang, Sukwon;Han, Bong-Hee;Lee, Gee-Myung;Na, Young-Sun
    • Journal of Plant Biotechnology
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    • v.31 no.4
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    • pp.307-312
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    • 2004
  • The bioreactor system for the large-scale plant tissue culture was developed to control the pH concentration and DO (dissolved oxygen), and air flowrate. The system controlling the proper air flow rate for each bulblet growth stage and monitoring the contamination of bioreactor using the pH change was controled by computer program. For the uniform bulblet distribution in bioreactor, the proper air flow rate was 300 cc/min at the beginning of bulblet culture, 400 cc/min after 20 days, 500 cc/min after 40 days, 600 cc/min after 60days, and 700 cc/min after 80 days. It was possible to maintain the pH concentration within 5.5$\pm$0.5 during the culture by control system of bioreactor.

Network Management Architecture using Mobile Agent technology (Mobile Agent 기술을 이용한 네트워크 관리 구조)

  • 오양훈;송왕철
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.3 no.4
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    • pp.747-754
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    • 1999
  • Mobile Agent is a movable software program that autonomously runs on behalf of its operator in a network environment. It has been widely applied to various kinds of computer engineering. In this paper, a network management architecture using the mobile agent technology in the distributed network environment is proposed. After manager system creates the mobile agent, it searches a proxy, a distributed object that acts as the substitute for a SNMP agent. In order to get the management information that manager requires, the mobile agent goes to the proxy and does operations on it. So, only the concise results from the operation are sent to the managing system. The proposed architecture is based on CORBA that provides several transparent characteristics in the distributed environment. In additional, the proxy object that represents the SNMP agent enables the mobile agent and the SNMP agent to converse with themselves. In this architecture, the mobile agent can carry out an automated management function, easily change and modify management functions. Therefore, it can provide an efficient management way.

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Automation of Dobson Spectrophotometer(No.124) for Ozone Measurements (돕슨 분광광도계(No.124)의 오존 자동관측시스템화)

  • Kim, Jhoon;Park, Sang-Seo;Moon, Kyung-Jung;Koo, Ja-Ho;Lee, Yun-Gon;Miyagawa, Koji;Cho, Hi-Ku
    • Atmosphere
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    • v.17 no.4
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    • pp.339-348
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    • 2007
  • Global Environment Laboratory at Yonsei University in Seoul ($37.57^{\circ}N$, $126.95^{\circ}E$) has carried out the ozone layer monitoring program in the framework of the Global Ozone Observing System of the World Meteorlogical Organization (WMO/GAW/GO3OS Station No. 252) since May of 1984. The daily measurements of total ozone and the vertical distribution of ozone amount have been made with the Dobson Spectrophotometer (No.124) on the roof of the Science Building on Yonsei campus. From 2004 through 2006, major parts of the manual operations are automated in measuring total ozone amount and vertical ozone profile through Umkehr method, and calibrating instrument by standard lamp tests with new hardware and software including step motor, rotary encoder, controller, and visual display. This system takes full advantage of Windows interface and information technology to realize adaptability to the latest Windows PC and flexible data processing system. This automatic system also utilizes card slot of desktop personal computer to control various types of boards in the driving unit for operating Dobson spectrophotometer and testing devices. Thus, by automating most of the manual work both in instrument operation and in data processing, subjective human errors and individual differences are eliminated. It is therefore found that the ozone data quality has been distinctly upgraded after automation of the Dobson instrument.

An Automated Test Data Generator for Debugging Esterel Programs (에스테렐 프로그램 디버깅을 위한 테스트 데이터 자동 생성)

  • Yun, Jeong-Han;Cho, Min-Kyung;Seo, Sun-Ae;Han, Tai-Sook
    • Journal of KIISE:Software and Applications
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    • v.36 no.10
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    • pp.793-799
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    • 2009
  • Esterel is an imperative synchronous language that is well-adopted to specify reactive systems. Programmers sometimes want simple validations that can be applied while the system is under development. Since a reactive system reacts to environment changes, a test data is a sequence of input events. Generating proper test data by hand is complex and error-prone. Although several test data generators exist, they are hard to learn and use. Mostly, system designers need test data to reach a specific status of a target program. In this paper, we develop a test data generator to generate test input sequences for debugging Esterel programs. Our tool is focused on easy usage; users can describe test data properties with simple specifications. We show a case study in which the test data generator is used for a practical development process.

An Analysis of Cohesion and Word Information among English CSAT Question Types (수능 영어 문항 유형간 응집력과 어휘정보 분석)

  • Choi, Minju;Kim, Jeong-ryeol
    • The Journal of the Korea Contents Association
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    • v.17 no.12
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    • pp.378-385
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    • 2017
  • The aim of this study was to analyze cohesion and word information among different types of questions in the English reading section of the College Scholastic Ability Tests (CSAT). The types of questions were divided into three categories: macro reading, micro reading, and indirect writing. Reading texts from 1994 to 2017 CSAT were analyzed by Coh-Metrix, an automated evaluation program of text and discourse. The findings of this study indicated that there were statistical differences among the three categories of questions for noun overlap, stem overlap, adversative and contrastive connective, additive connective, pronoun incidence, age of acquisition, concreteness for content word, imagability, and meaningfulness. The information of the findings bore pedagogic implications for developing textbooks, questions for CSAT, and reading strategies by students.

Development of Mandibular Movements Measuring System Using Double Stereo-Cameras

  • Park, Soon-Yong;Park, Sung-Kee;Cho, Chang-Hyun;Kim, Mun-Sang;Park, Mi-Gnon
    • 제어로봇시스템학회:학술대회논문집
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    • 2005.06a
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    • pp.1183-1188
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    • 2005
  • In this paper, we propose a 3D automated measuring system which measures the mandibular movements and the reference plane of the jaw movements. In diagnosis and treatment of the malocclusions, it is necessary to estimate the mandibular movements and the reference plane of the jaw movements. The proposed system is configured with double stereo-cameras, PC, two moving pattern plates(MPPs), two fixed pattern plates(FPPs) and one orbital marker. The virtual pattern plate is applied to calculate the homogeneous transformation matrices which describe the coordinates systems of the FPP and MPP with respect to the world coordinates system. To estimate the parameters of the hinge axis, the Euler's theorem is applied. The hinge axis points are intersections between the FPPs and the hinge axis. The coordinates of a hinge axis point with respect to the MPP coordinates system are set up to fixed value. And then, the paths of the jaw movement can be calculated by applying the homogeneous transformation matrix to fixed hinge axis point. To examine the accuracy of the measurements, experiments of measuring the hinge axis points and floating paths of them are performed using the jaw motion simulator. As results, the measurement errors of the hinge axis points are within reasonable boundary, and the floating paths are very similar to the simulator's moving path.

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The Analysis of View and Daylights for the Design of Public Housing Complexes Using a Residential Environment Analysis System Integrated into a CAD System (주거환경분석시스템의 CAD 시스템 통합을 통한 공동주택단지설계 시 일조 및 조망분석에 관한 연구)

  • Park, Soo-Hoon;Ryu, Jeong-Won
    • Korean Journal of Computational Design and Engineering
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    • v.12 no.2
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    • pp.137-145
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    • 2007
  • This paper concerns about residential environment analysis program implementation for design and analysis on public housing complexes such that view and daylight analysis processes are automated and integrated into existing design routine to achieve better design efficiency. Considering the architectural design trends this paper chooses ArchiCAD as a platform for a CAD system, which contains the concepts such as integrated object-oriented CAD, virtual building and BIM. Residential environment analysis system consists of three components. The first component is the 3D modeling part defining 3D form information for external geographic contour models, site models and interior/exterior of apartment buildings. The second is the parametric library part handling the design parameters for view and daylight analysis. The last is the user interface for the input/output and integration of data for the environment analysis. Daylight analysis shows rendered images as well as results of daylight reports and grades per time and performs the calculations for floor shadow. It separates the site-only analysis from the analysis of site and exterior environmental parameters. View analysis considers horizontal and vertical view angles to produce view image from each unit and uses the bitmap analysis method to determine opening ratio, scenery ratio and void ratio. We could expect better performance and precision from this residential environment analysis system than the existing 2D drawing based view and daylight analysis methods and overcome the existing one-way flow of design information from 3D form to analysis reports so that site design modifications are automatically reflected on analysis results. Each part is developed in a module so that further integration and extension into other related estimation and construction management systems are made possible.

Design and Implementation of a Search Engine based on Apache Spark (아파치 스파크 기반 검색엔진의 설계 및 구현)

  • Park, Ki-Sung;Choi, Jae-Hyun;Kim, Jong-Bae;Park, Jae-Won
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.21 no.1
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    • pp.17-28
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    • 2017
  • Recently, a study on data has been actively conducted because the value of the data has become more useful. Web crawler that is program of data collection recently spotlighted because it can take advantage of the various fields. Web crawler can be defined as a tool to analyze the web pages and collects the URL by traversing the web server in an automated manner. For the treatment of Big-data, distributed Web crawler is widely used which is based on the Hadoop MapReduce. But, it is difficult to use and has constraints on the performance. Apache spark that is the In-memory computing platform is an alternative to MapReduce. The search engine which is one of the main purposes of web crawler displays the information you search by keyword gathered by web crawler. If search engines implement a spark-based web crawler instead of traditional MapReduce-based web crawler, it would be a more rapid data collection.