• Title/Summary/Keyword: Agriculture residue

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Crystal Structure of the Regulatory Domain of AphB from Vibrio vulnificus, a Virulence Gene Regulator

  • Park, Nohra;Song, Saemee;Choi, Garam;Jang, Kyung Ku;Jo, Inseong;Choi, Sang Ho;Ha, Nam-Chul
    • Molecules and Cells
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    • v.40 no.4
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    • pp.299-306
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    • 2017
  • The transcriptional activator AphB has been implicated in acid resistance and pathogenesis in the food borne pathogens Vibrio vulnificus and Vibrio cholerae. To date, the full-length AphB crystal structure of V. cholerae has been determined and characterized by a tetrameric assembly of AphB consisting of a DNA binding domain and a regulatory domain (RD). Although acidic pH and low oxygen tension might be involved in the activation of AphB, it remains unknown which ligand or stimulus activates AphB at the molecular level. In this study, we determine the crystal structure of the AphB RD from V. vulnificus under aerobic conditions without modification at the conserved cysteine residue of the RD, even in the presence of the oxidizing agent cumene hydroperoxide. A cysteine to serine amino acid residue mutant RD protein further confirmed that the cysteine residue is not involved in sensing oxidative stress in vitro. Interestingly, an unidentified small molecule was observed in the inter-subdomain cavity in the RD when the crystal was incubated with cumene hydroperoxide molecules, suggesting a new ligand-binding site. In addition, we confirmed the role of AphB in acid tolerance by observing an aphB-dependent increase in cadC transcript level when V. vulnificus was exposed to acidic pH. Our study contributes to the understanding of the AphB molecular mechanism in the process of recognizing the host environment.

Monitoring of Pesticide Residues in Agricultural Products Collected from Markets in Cheongju and Jeonju (청주 및 전주지역 유통 농산물 중 잔류농약 모니터링)

  • Lee, Eon-Young;Noh, Hyun-Ho;Park, Young-Soon;Kang, Kyung-Won;Jo, Seong-Yong;Lee, Seung-Reul;Park, In-Young;Kim, Tae-Hwa;Jin, Yong-Duk;Kyung, Kee-Sung
    • The Korean Journal of Pesticide Science
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    • v.12 no.4
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    • pp.357-362
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    • 2008
  • In order to survey the residual characteristics of pesticides and assess their safeties in the agricultural products from markets, the agricultural products were purchased from the wholesale and traditional markets in Cheongju and Jeonju and analyzed the pesticide residues in them. No pesticide residues were found in samples from Cheongju, whereas, in case of samples collected from Jeonju, 3 pesticides including chlorothalonil were detected from 5 samples such as eggplant from wholesale market and 3 pesticides including azoxystrobin were found in tomato and grape from traditional market. Pesticide residues were detected from 10.9% of the total samples and detection levels were less than their maximum residue levels. Their estimated daily intakes ranged from 0.00102 to 0.03616% of their acceptable daily intakes, representing residue levels of the pesticides detected were evaluated to be safe.

Characteristics of Pesticide Residues in Leafy Vegetables Collected from Wholesale and Traditional Markets in Cheongju (청주지역 도매시장과 재래시장 유통 엽채류 중 농약의 잔류 특성)

  • Noh, Hyun-Ho;Lee, Kwang-Hun;Lee, Jae-Yun;Park, Hyo-Kyoung;Park, So-Hyun;Kim, Sun-Ho;Kyung, Kee-Sung
    • The Korean Journal of Pesticide Science
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    • v.15 no.4
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    • pp.453-462
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    • 2011
  • This study was carried out to survey the residual characteristics of pesticides and assess their safety. Nineteen agricultural commodities, collected from wholesale and traditional markets in Cheongju. Nineteen agricultural commodities including perilla leaves were collected from the markets on October 29th, 2010. Total 240 pesticides which can be analyzed by multiresidue analysis method by GLC and HPLC were monitored and the pesticides detected were confirmed by GC-MSD and LC-MS. Five pesticides, alachlor, bifenthrin, endosulfan, procymidone and triflumizole, were detected from five samples, such as welsh onion, leek and celery in case of wholesale market and perilla leaves and welsh onion in case of traditional market. Detection rate of 13.2% was obtained as a result of pesticide analysis but 2.6% of the pesticides detected exceeded their maximum residue limits. The estimated daily intakes (EDIs) and maximum permissible intakes (MPIs) of the pesticides detected were less than 26% and 0.05% of their acceptable daily intakes (ADIs) respectively, representing that residue levels of the pesticides detected would be safe.

Dissipation and Processing Factor of Etofenprox and Fenitrothion Residue in Chinese Matrimony Vine by drying (건조에 따른 구기자 중 etofenprox와 fenitrothion의 잔류량 변화 및 가공계수)

  • Noh, Hyun Ho;Lee, Jae Yun;Park, Hyo Kyoung;Jeong, Hye Rim;Lee, Jung Woo;Jo, Seung Hyeon;Kwon, Hyeyoung;Kyung, Kee Sung
    • Korean Journal of Environmental Agriculture
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    • v.37 no.3
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    • pp.213-220
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    • 2018
  • BACKGROUND: This study was carried out to determine characteristics of residual pesticides in time-dependent manner and calculate half-lives of the residual pesticides in fresh and dried Chinese matrimony vine. In addition, processing factors were calculated based on the residual concentrations in them. METHODS AND RESULTS: The test pesticides, etofenprox and fenitrothion, were sprayed onto the Chinese matrimony vine plants at once or twice (at seven-day interval) and then samples were collected at 0 (after 3 hours), 1, 3, 5 and 7 days after the last spraying. Dried samples were prepared in hot-air drying oven at $60^{\circ}C$ for 48 hours until water content of less than 20%. Residual concentrations of etofenprox in fresh and dried samples decreased by 54.0-60.9% after 7 days of the last pesticide-application. In case of fenitrothion, the concentrations were found to have decreased by 69.2-76.5%. Processing factors of etofenprox were 2.6-3.0 for the one-time spraying and 2.5-3.0 for the two-time spraying and those of fenitrothion were found to be 1.5-22 for the one-time spraying and 1.6-2.0 for the two-time spraying. First half-lives of etofenprox and fenitrothion in fresh and dried samples ranged from 5.0 to 6.3 and from 3.4 to 4.0 days, respectively. The third half-lives were found to be 15.0-18.9 and 10.2-12.1 days, respectively. CONCLUSION: Residual concentrations of the tested pesticides in the studied crop decreased, but those in the dried samples appeared to have increased. In addition, processing factor and half life were constant regardless of spraying times.

Establishment of Pre-Harvest Residue Limit for Pyrimethanil and Methoxyfenozide during Cultivation of grape (포도(Vitis vinifera L.) 중 Pyrimethanil 및 Methoxyfenozide의 생산단계 잔류허용기준 설정)

  • Kim, Ji Yoon;Woo, Min Ji;Hur, Kyung Jin;Manoharan, Saravanan;Kwon, Chan-Hyeok;Hur, Jang Hyun
    • The Korean Journal of Pesticide Science
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    • v.19 no.2
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    • pp.81-87
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    • 2015
  • The present study was aimed to predict the pre-harvest residue limits (PHRLs) of pyrimethanil (fungicide) and methoxyfenozide (insecticide) in grape, and to estimate their biological half-lives and residual characteristics. The pesticides were sprayed once on grape in two different fields 10 days before harvest. At the end of 0, 1, 2, 3, 5, 7 and 10 days after application, samples were harvested for further analysis. The residual pesticides were extracted with acetonitrile and partitioned with dichloromethane, and the high-performance liquid chromatography with diode array detector (HPLC/DAD) was employed for the residue analysis. The results obtained in the present study show that the limit of detection of both pesticides were found to be $0.01mg\;kg^{-1}$. The recoveries of these pesticides were ranged between 80.6% and 102.5% with coefficient of variation lower than 10%. The biological half-lives of both pesticides were observed in field 1 and field 2 which shows 7.7 and 7.4 days for pyrimethanil and 5.1 and 6.1 days for methoxyfenozide, respectively. Further, the PHRL of pyrimethanil and methoxyfenozide was found to be $8.90mg\;kg^{-1}$ and $5.51mg\;kg^{-1}$, respectively at 10 days before harvest. Consequently, the present study suggests that the residual amounts of both pesticides will be lower than the maximum residue limits (MRLs) when grape is harvested.

Determination and confirmation of the carbendazim residue in soybean sprout (콩나물중 살균제 carbendazim 잔류분의 정량 및 확인)

  • Kim, Young-Gook;Park, Jong-Tae;Hong, Suk-Soon
    • The Korean Journal of Pesticide Science
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    • v.2 no.3
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    • pp.79-84
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    • 1998
  • Tandem HPLC and atmospheric pressure chemical ionization(APcI) LC/MS method was used for the determination and confirmation of carbendazim residues in soybean sprout. Fluorescence(FL) detector was connected in tandem with the ultraviolet(UV) detector for dual detection of the carbendazim residue at the excitation and emission wavelength of 280 nm and 310 nm, respectively. The limit of detection for carbendazim was $0.1{\mu}g/kg$ sample. Recoveries of carbendazim from fortified soybean sprout at 0.5, 1.0 and 2.0 ppm were averaged 89.1%. Mass spectrometry using a APcI source confirmed the carbendazim residue in the soybean sprout sample. Fragmentation pattern on the APcI LC/MS spectrum of carbendazim was simpler than that from electron impact(EI) mass spectrum. Carbendazim produced 3 major ions including m/z 133, m/z 159 and m/z 191($M^{+}$). This method was sensitive enough to provide reliable and reproducible results for practical applications.

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Absorption , Translocation and Residue of Carbofuran in Miniature Paddy Agrosystem (소형수도재배구중(小型水稻栽培區中) Carbofuran 의 흡수(吸收) 이행(移行) 및 잔류특성(殘留特性))

  • Lee, Young-Deuk;Park, Hyung-Man;Park, Young-Sun;Park, Chang-Kyu
    • Korean Journal of Environmental Agriculture
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    • v.6 no.1
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    • pp.31-37
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    • 1987
  • A study has been conducted to investigate the behavior of carbofuran in a miniature paddy agrosystem simulated for paddy field. Carbofuran applied onto the paddy water was rapidly absorbed and translocated into rice plants. Carbofuran concentration in rice plant reached its maximum level between 1 to 3 days after treatment and gradually decreased thereafter. Half life of carbofuran concentration in paddy water was 4 days in both application rates of 0.12 and 0.24Kg a.i./10a. Carbofuran residue in paddy soil was gradually dissipated with the half life of 8 and 12 days in 0.12 and 0.24㎏ a.i./l0a respectively. Range of carbofuran residue in brown rice and rice straw harvested from the paddy agrosystem was 0.01∼0.02 ppm and 0.37∼0.57 ppm irrespective of the two application rates respectively.

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Monitoring and Risk Assessment of Pesticide Residues in Pre-harvest Fresh Ginseng (Panax ginseng C. A. Meyer) in Chungbuk Province in 2019 (충북지역 생산단계 수삼 중 잔류농약 모니터링 및 위해성 평가(2019))

  • Song, Tae Hwa;Lee, Young Wook;Youn, Taek Han;Park, Eun A;Shim, Eun Sun;Lee, Ju Hee;Kyung, Kee Sung
    • Korean Journal of Environmental Agriculture
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    • v.40 no.2
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    • pp.118-126
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    • 2021
  • BACKGROUND: It is very important to monitor the residual characteristics of pesticides in pre-harvest fresh ginseng to ensure consumer safety. METHODS AND RESULTS: Forty-eight fresh ginseng samples were collected from 8 ginseng-growing fields 10 days before harvest and pesticide residues in fresh ginseng with and without rhizome (head of ginseng) and rhizome were analyzed for 320 pesticides by using GC-MS/MS and LC-MS/MS. As a result of the pesticide residue analysis, the number of pesticides detected from the fresh ginseng with rhizome, that without rhizome and rhizome were 26, 25, and 40, respectively, indicating that high number of pesticides found in rhizome, compared with the other parts. Pyraclostrobin was detected with the highest frequency in all samples, reaching to 21.2% in fresh ginseng with rhizome, 16.8% in that without rhizome, and 14.8% in rhizome. CONCLUSION: The residue levels of pesticides detected did not exceed their maximum residue limits, in spite of residual data in fresh ginseng before harvest. The amounts of the estimated daily intakes of all the detected pesticides were found to be from 0.018 to 1.818% of their acceptable daily intakes, indicating that concentrations of pesticides detected from fresh ginseng with and without rhizome collected before harvest do not pose the immediate health risks.

Gas Chromatography Residue Analysis of Bifenthrin in Pears Treated with 2% Wettable Powder

  • Choi, Jeong-Heui;Liu, Xue;Kim, Hee-Kwon;Shim, Jae-Han
    • Toxicological Research
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    • v.25 no.1
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    • pp.41-45
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    • 2009
  • This study was conducted to monitor the level of bifenthrin residues in pear sprayed with 2% bifenthrin wettable powder (WP) at the recommended rate at four different schedules prior to harvest. The target analyte was extracted with acetone, partitioned into dichloromethane, and then purified by florisil chromatographic column. The residue determination was performed on a DB-5 capillary column using GC with electron capture detector (ECD). Linearity of this method was quite good ($r^2$ = 0.9951) in the concentration ranged from 0.2 mg/kg to 10 mg/kg. Recovery test was carried out at two concentration levels, 0.2 mg/kg and 1.0 mg/kg, in three replicates, and their rates were from 82.9% to 107.2%. No quantitative bifenthrin was detected in pear of all kinds of treatments including the treatment sprayed 4 times until 7 days before harvest. This sensitive and selective method can be used to monitor the trace residual amounts of bifenthrin in pear in a quite low concentration level.

Residues of a New Fungicide, KNF 1002 in Cucumber and Pepper (신규 살균제 KNF 1002의 오이 및 고추 중 잔류특성)

  • Kim, Tae-Hwa;Lee, Jae-Yeong;Yu, Yong-Man;Kim, Jang-Eok
    • Korean Journal of Environmental Agriculture
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    • v.22 no.3
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    • pp.227-232
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    • 2003
  • This study was conducted to evaluate the terminal residue of a new fungicide, KNF 1002, in cucumber and pepper under greenhouse and field conditions. When a microemulsion formulation (20%) of KNF 1002 was applied once or twice during $1{\sim}7$ days before harvest, its terminal residue in cucumber ranged <$0.02{\sim}0.20\;mg/kg$ under greenhouse condition. In pepper, its figure recorded $0.31{\sim}0.79\;mg/kg$ and $0.11{\sim}0.28\;mg/kg$ under greenhouse and field conditions, respectively. Much higher level of terminal residues was observed in leaves than those in fruits in pepper, showing $7.38{\sim}25.20\;mg/kg$ and $0.11{\sim}1.99\;mg/kg$ under greenhouse and field conditions, respectively. Cultivation condition affected evidently the residue level in pepper harvests. Residual pattern of KNF 1002 seemed to be comparable to strobilurin fungicides currently used.