• Biotechnology and Bioprocess Engineering:BBE
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• v.7 no.2
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• pp.105-111
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• 2002

The biological removal of 2,4,6-trinitrotoluene (TNT) was studied in a bench-scale bioreactor using a bacterial culture of strain OK-5 originally Isolated from soil samples contaminated with TNT. The TNT was completely removed within 4 days of incubation in a 2.5 L bench-scale bioreactor containing a newly developed medium. The TNT was catabolized in the presence of different supplemented carbons. Only minimal growth was observed in the killed controls and cultures that only received TNT during the incubation period. This catabolism was affected by the concentration ratio of the substrate to the biomass. The addition of various nitrogen sources produced a delayed effect for the TNT degradation. Tween 80 enhanced the degradation of TNT under these conditions. Two metabolic intermediates were detected and identified as 2-amino-4, 6-dinitrotoluene and 4-amino-2, 6-dinitrotoluene based on HPLC and GC-MS analyses, respectively. Strain OK-5 was characterized using the BIOLOG system and fatty acid profile produced by a microbial identification system equipped with a Hewlett Packard HP 5890 II gas chromatograph. As such, the bacterium was identified as a Stenotrophomonas species and designated as Stenotrophomonas sp. OK-5.

• Journal of the Korean Geosynthetics Society
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• v.9 no.3
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• pp.67-75
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• 2010

The tensile strength, permeability and discharge capacity of biodegradable plastic drain boards made with poly lactic acid (PLA) have been tested and verified prior to their usage at field. Based on test results, the tensile strength of biodegradable plastic drain board made with PLA has relatively lower tensile strain and tensile strength than those of plastic drain board. Performance of PLA filter having good permeability and low opening size is proper for the filter of vertical drain board. In case of improving stiffness of PLA filter, biodegradable plastic drain board also satisfies required discharge capacity as use of vertical drain board too.

• Mycobiology
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• v.39 no.3
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• pp.182-186
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• 2011

Four Trichoderma strains (CH2, SH16, PQ34, and TN42) were isolated from soil samples collected from Quang Tri and Thua Thien Hue provinces in Vietnam. The strains exhibited high chitinolytic secretion. Strain PQ34 formed the largest zone of chitinase-mediated clearance (> 4 cm in diameter) in agar containing 1% (w/v) colloidal chitin. Analysis of the internal transcribed spacer regions of these strains indicated that they were Trichoderma asperellum. The molecular weights of the chitinases were approximately 42 kDa. Chitinase genes (chi42) of T. asperellum strains TN42, CH2, SH16, and PQ34 were 98~99% homologous to the ech42 gene of T. harzianum CB-Pin-01 (accession No. DQ166036). The deduced amino acid sequences of both T. asperellum strains SH16 and TN42 shared 100% similarity.

• YAKHAK HOEJI
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• v.47 no.3
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• pp.184-189
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• 2003

Peptide deformylase (PDF) is essential and unique to bacteria, thus making it an attractive target for the discovery of novel antibacterial drugs. PDF deformylates the N-formylmethionine of newly synthesized polypeptides in prokaryotes. In this study, a pdf gene from Staphylococcus aureus 6538p was cloned in pET-14b vector and PDF protein was over-produced in Escherichia coli BL21 (DE3). NH$_2$-terminal His-tagged PDF protein was purified by nickel-nitrilotriacetic acid (Ni-NTA) metal-affinity chromatography. Enzymatic activity of purified 6xHis-tagged PDF was tested on the substrate (formyl-Methionine-Alanine-Serine) by formate dehydrogenase-coupled spectrometric assay of peptide deformylase. For the discovery of new PDF inhibitors from chemical libraries and culture broths of soil bacteria, a target-oriented screening system using a 96-well plate was developed. About 3,000 commercial chemical libraries were tested in this screening system, and 2 chemicals (0.07％) among them showed an inhibitory activity against PDF enzyme. This result showed that a new screening system can be used for the discovery of new PDF inhibitors.

• Korean Journal of Microbiology
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• v.33 no.3
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• pp.187-192
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• 1997

The strain producing biosurfactant was isolated from soil. The isolated strain was identified as the genus Tsukamurella through its morphological, cultural, physiological, menaquinone type, fatty acid composition characteristics. The highest biosurfactant production by Tsukamurella sp. 26A was observed after 4 days cultivation in the culture medium containing n-hexadecane 7%, $NaNO_{3}$ 0.2%, $K_2HPO_4$ 0.001%, $MgSO_{4}$ center dot $7H_{2}O$ 0.02%, $CaCl_2$ center dot $2H_{2}O$ 0.02%, yeast extract 0.02%(pH 6.8-7.0, 30^{\circ}C.$ The surface and interfacial tension of an aqueous solution reached 30 mNim and 1.5 mNim, respectively. The biosurfactant stabilized oil-in-water emulsion with a variety of hydrocarbons, edible oils and petroleum oils.

• Microbiology and Biotechnology Letters
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• v.19 no.3
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• pp.296-302
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• 1991

Glucose isomerase producer, which produces 488 U/ml of glucose isomerase activity in 500 ml flask scale, was isolated among 666 isolates of Actinomycetes from pine forest soil samples. The isolate was identified as Streptomyces luteogriseus through the studies about morphology (spiral aerial mycelia), cell wall type (Type I), spore chains (spiral form), pigment formation (gray melanine pigment) & metabolism (sugar utilization etc). The optimum conditions of fermentation were determined in 500 ml flask scale. The enzyme production was reached maximum after 4 days at pH 6.0~8.0 and 27~$30^{\circ}C$ in the medium containing 1.5~3.0% of xylose; 0.5-0.8% of glucose; 0.1% of $MgSO_4.7H_20$; 0.05% of $CoCI_2-6H_20$; 7.5% of corn steep liquor.

• Microbiology and Biotechnology Letters
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• v.21 no.1
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• pp.6-12
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• 1993

Among 294 Actinomycetes isolated from soil, a strain that had appeared to produce the highest level of chitinase selected for further studies. The selected strain was identified as a Streptomyces lydicus based on the data obtained from the morphological, biochemical and cultural experiments. The cultural conditions for the enzyme production were also examined, and the results obtained were as follows: the maximal enzyme production was attained when the cells were cultured at $30^{\circ}C$ for 6 days in the medium supplemented with 2% of colloidal chitin. The optimum initial pH of the medium was observed to be 8. It was also found that the most effective carbon and nitrogen sources were soluble starch and ammonium oxalate, respectively.

• Journal of Microbiology and Biotechnology
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• v.19 no.6
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• pp.588-595
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• 2009

A bacterial strain, YK-2, was isolated as a producer of trans glutaminase from a forest soil sample of Daegu, Korea. The isolate showed a G+C content of 72.7 mol%, contained meso-$A_2pm$ as the cell-wall amino acid, and possessed menaquinone MK-9 ($H_6$) and menaquinone MK-9 ($H_8$) at a ratio of 6:4. The chemotaxonomic analysis, as well as phylogenetic analysis based on the 16S rDNA sequence, identified the isolate as a member of Streptomyces platensis. For transglutaminase production, the optimum medium composition was determined to be 2% glucose, 1% polypeptone, 1% soy tone, and 0.1% $MnCl_2$. The transglutaminase was stable within the pH range of 5.0-9.0 and $30-45^{\circ}C$, and the optimum pH and temperature were pH 8.0 and $45^{\circ}C$, respectively, without any requirement for $Ca^{2+}$.

• Hwankyungkyoyuk
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• v.5 no.1
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• pp.19-33
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• 1993

This result showed that the middle school students' response for the environment condition was highly negative. The major findings of this study are as follows. 1. Students would become to know the environmental pollution through reading of newspapers and TV rather than school education. 2. Students' response for air and water pollution was seriously accepted in city areas than in country areas, and in large cities than in small cities. 3. Students' response for air pollution showed that the quality of air was getting worse and major factor of air pollution was the exhausts of automobiles. 4. It showed that students' concern for water pollution was increased and water pollution was being accelerated by the increase of domestic and industrial sewages, the overuse of the agricultural chemicals, the entrophication and acid rain. 5. Students thought that soil pollution was mainly due to factory sewage, life sewage, heavy metal and agricultural medicines and so on. But now they think it is due to the degenerated and inseparable things such as used vinyle for farm and plastics. 6. Most students thought of the pollution of our country as serious. But they thought it could be removed if we tried to get rid of pollution. 7. Now students' consciousness to protect the nature took an active interest turn and was strong. Putting these various findings together, I suggested that, the efforts to turn students affirmative consciousness for the environment and a powerful plan by the nation to take off pollution should be needed. Also the education to enforce the environment preservation had to be needed.

• Journal of Microbiology
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• v.42 no.2
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• pp.87-93
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• 2004

Twelve mecoprop-degrading bacteria were isolated from soil samples, and their genetic and phenotypic characteristics were investigated. Analysis of 16S rDNA sequences indicated that the isolates were related to members of the genus Sphingomonas. Ten different chromosomal DNA patterns were obtained by polymerase-chain-reaction (PCR) amplification of repetitive extragenic palindromic (REP) sequences from the 12 isolates. The isolates were found to be able to utilize the chiral herbicide meco-prop as a sole source of carbon and energy. While seven of the isolates were able to degrade both (R)-and (S)-mecoprop, four isolates exhibited enantioselective degradation of the (S)-type and one isolate could degrade only the (R)-enantiomer. All of the isolates were observed to possess plasmid DNAs. When certain plasmids were removed from isolates MPll, MP15, and MP23, those strains could no longer degrade mecoprop. This compelling result suggests that plasmid DNAs, in this case, conferred the ability to degrade the herbicide. The isolates MP13, MP15, and MP24 were identified as the same strain; however, they exhibited different plasmid profiles. This indicates that these isolates acquired dif-ferent mecoprop-degradative plasmids in different soils through natural gene transfer.