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Workflow for Building a Draft Genome Assembly using Public-domain Tools: Toxocara canis as a Case Study (개 회충 게놈 응용 사례에서 공개용 분석 툴을 사용한 드래프트 게놈 어셈블리 생성)

  • Won, JungIm;Kong, JinHwa;Huh, Sun;Yoon, JeeHee
    • KIISE Transactions on Computing Practices
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    • v.20 no.9
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    • pp.513-518
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    • 2014
  • It has become possible for small scale laboratories to interpret large scale genomic DNA, thanks to the reduction of the sequencing cost by the development of next generation sequencing (NGS). De novo assembly is a method which creates a putative original sequence by reconstructing reads without using a reference sequence. There have been various study results on de novo assembly, however, it is still difficult to get the desired results even by using the same assembly procedures and the analysis tools which were suggested in the studies reported. This is mainly because there are no specific guidelines for the assembly procedures or know-hows for the use of such analysis tools. In this study, to resolve these problems, we introduce steps to finding whole genome of an unknown DNA via NGS technology and de novo assembly, while providing the pros and cons of the various analysis tools used in each step. We used 350Mbp of Toxocara canis DNA as an application case for the detailed explanations of each stated step. We also extend our works for prediction of protein-coding genes and their functions from the draft genome sequence by comparing its homology with reference sequences of other nematodes.

Technology Keyword Network and Cognitive Map Analysis: to prospect promising technology of UAV(Unmanned Aerial Vehicle) airframe industry (기술 키워드 네트워크와 인지지도 분석을 통한 무인항공기 비행체산업의 유망기술 도출 연구)

  • Joo, Seong-Hyeon;Ha, Sung-Ho;Park, Sang-Hyeon
    • Journal of Korea Society of Industrial Information Systems
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    • v.21 no.5
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    • pp.55-72
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    • 2016
  • This study aims at providing a methodology for retaining international technology competitiveness, marketable industry, and sustainable promising technology in a field of new growth engine industry such as national unmanned aerial vehicle industry. We draw a result by analysing with tools such as KrKwic, Excel, NetMiner, presenting methods of a Social Network Analysis, sub-group analysis, and cognitive map analysis based on patent data in a field of unmanned aerial vehicle industry. As a result, some future promising technologies are prospected as what worths concentrated investment, such as 'pilot control tech', 'identification of friend or foe tech'.

Economic Analysis of Grid-connected Microgrid of Industrial Complex Using Homer (Homer를 이용한 산업단지 계통연계 마이크로그리드 경제성 분석)

  • Na, Jeong-Sueng;Son, Nam-Rye;Yang, Hyun-Chang;Yang, Seung-Hak
    • Proceedings of the KIPE Conference
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    • 2019.11a
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    • pp.236-238
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    • 2019
  • 국내 마이크로그리드는 실증단지, 도서지역, 캠퍼스, 산업단지등에 구축되고 있다. 특히 산업단지는 수용가의 전기에너지 이용 효율화와 신재생에너지 전원을 활용한 전력거래를 위해 마이크로그리드를 구축하는 추세이다. 본 논문에서는 ESS(Energy Storage System) 복합운영을 통한 비용절감과 전력거래 수익창출 실증을 위하여 나주혁신도시 동수산업단지 내계통과 연계된 제조업체(태산, 범한, 하이옥스)에 구축되는 마이크로그리드 경제성을 분석한다. 경제성 분석 툴인 HOMER를 이용하여 각 업체별 PV(PhotoVoltaic) 및 ESS용량에 따른 순 현재비용과 1[kWh]당 발전단가를 산출한다. 경제성 분석을 위해 각 제조업체의 최근 1년간 부하량과 산업용 전기요금기준, 기업체 소재지의 기후조건에 따른 태양광발전량, 각 기업체 마이크로그리드 실제구축비용을 입력하고, 공인할인율 5.5[%]와 유류비 1500[원/ℓ]를 기준으로 경제성을 분석한다. 분석을 바탕으로 개별 제조업체 부하 특성에 부합한 마이크로그리드 분산전원 및 설비 용량 선정과 운영방안을 제안한다.

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A Study of the DEVOPS Test Automation Module for Integrated Development Environment (통합 개발환경에서 데브옵스 기반 테스트 자동화 모듈 개발에 대한 연구)

  • Jung Kwang Lak;Kim Sun Joo
    • Convergence Security Journal
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    • v.22 no.1
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    • pp.3-9
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    • 2022
  • The role of the integrated development environment is very important in software development of a development project. After many developers develop different modules, software product is completed through compile, debugging, integration, testing, and distribution. However, bugs and various issues in the development process cause problems such as quality deterioration of software product and dissatisfaction with requirements. So the need for automated testing to avoid these problems and improve quality has increased. In this study, we propose test automation modules of four perspectives to improve quality throughout the test automation in an integrated development environment. Each automation module operates through the tool chain of an integrated build framework implemented on the devops.

Development of System Performance Analysis Simulator for Spaceborne Synthetic Aperture Radar (위성용 영상레이더 시스템 성능 분석 시뮬레이터 개발)

  • Won, Young-Jin;Lee, Jae-Hyun
    • Journal of the Korean Society for Aeronautical & Space Sciences
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    • v.45 no.4
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    • pp.318-327
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    • 2017
  • Synthetic Aperture Radars (SARs) that can be performed regardless of weather and day-and-night conditions have been developed for Earth remote sensing in recent decades. Korea Aerospace Research Institute (KARI) has developed and launched successfully the KOrea Multi-Purpose SATellit-5 (KOMPSAT-5) which is the first Korean SAR satellite in 2013, and is currently developing the KOMPSAT-6 which is the next generation series of the SAR satellite. This paper describes the development of the system performance analysis simulator which is necessary for spaceborne SAR payload design and analysis. The system performance analysis simulator consists of the antenna pattern generation simulator, the SAR performance analysis simulator, and the image quality analysis simulator. The simulation results of this research show that this simulator can be applicable as the design and analysis tool for the spaceborne SAR payload system during the design phase.

ZBrush 3D animation character modeling using ZSphere (ZSphere를 활용한 ZBrush의 3D애니메이션 캐릭터모델링)

  • Ryu, Chang-Su;Hur, Chang-Wu
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.16 no.6
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    • pp.1312-1317
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    • 2012
  • ZSphere of ZBrush can be added to the canvas, and most of all, added to the existing ZSphere as mobile geometrical objects. For example, arms can be produced out of the globoid in the progress of an intermediate step. characters with multiple limbs can be produced easily in this way. With Zsphere, several Child Spheres can be produced out of single Sphere, then these can be parents spheres, and can connect other Child Spheres. In this paper, by making each form through these processes, 3D characters were modeled to shape easily and rapidly. Since 3D objects can be added, rotated, and moved, they can interact smoothly with Z-depth of campus. To place these objects on the screen, paint, build fixed perspective image, smerge pixols and transform 3D objects, diverse transforming tools and sculpturing tools were used. The characters were designed in the way that first, the finished 3D characters were transformed into poly, then each side was restructured rapidly with Topology.

Analysis of Accountability for Trust DRM Cloud Service and Design of Monitoring Tool (신뢰되는 DRM 클라우드 서비스를 위한 책임 추적성 분석 및 모니터링 툴 설계)

  • Lee, Hyejoo;Seo, Changho;Shin, Sang Uk
    • Journal of Digital Convergence
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    • v.12 no.12
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    • pp.303-311
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    • 2014
  • The accountability of cloud service which provides the cloud users with accountable services applies various technologies such as the compliance of service policy, monitoring and auditing, logging, and others. It ultimately intends to provide trustworthy cloud service by determining who is accountable for various problems happened during data processing and service offering. In this paper, we propose a cloud ecosystem formed from the chain of content and DRM Cloud service in order to offer secure and trust DRM cloud service when providing high value-added content service. Besides this, we analyse the requirements of cloud services for content owners and users and then propose some logging information to be recorded for trace of accountability and a structure of tool for monitoring.

Character modeling using ZSphere (ZSphere를 활용한 캐릭터모델링)

  • Ryu, Chang-Su;Hur, Chang-Wu
    • Proceedings of the Korean Institute of Information and Commucation Sciences Conference
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    • 2011.10a
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    • pp.524-526
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    • 2011
  • ZSphere of ZBrush can be added to the screen, and most of all, added to the existing ZSphere as mobile geometrical objects. For example, legs can be produced out of the globoid in the progress of an intermediate step. characters with multiple limbs can be produced easily in this way. With Zsphere, several Child Spheres can be produced out of single Sphere, then these can be parents spheres, and can connect other Child Spheres. In this paper, by making each form through these processes, 3D characters were modeled to shape easily and rapidly. Since 3D objects can be added, rotated, and moved, they can interact smoothly with Z-depth of campus. To place these objects on the screen, paint, build fixed perspective image, smerge pixols and transform 3D objects, diverse transforming tools and sculpturing tools were used. The characters were designed in the way that first, the finished 3D characters were transformed into poly, then each side was restructured rapidly with Topology.

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Design of AES-Based Encryption Chip for IoT Security (IoT 보안을 위한 AES 기반의 암호화칩 설계)

  • Kang, Min-Sup
    • The Journal of the Institute of Internet, Broadcasting and Communication
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    • v.21 no.1
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    • pp.1-6
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    • 2021
  • The paper proposes the design of AES-based encryption chip for IoT security. ROM based S-Box implementation occurs a number of memory space and some delay problems for its access. In this approach, S-Box is designed by pipeline structure on composite field GF((22)2) to get faster calculation results. In addition, in order to achieve both higher throughput and less delay, shared S-Box are used in each round transformation and the key scheduling process. The proposed AES crypto-processor is described in Veilog-HDL, and Xilinx ISE 14.7 tool is used for logic synthesis by using Xilinx XC6VLX75T FPGA. In order to perform the verification of the crypto-processor, the timing simulator(ModelSim 10.3) is also used.

Design of Lightweight S-Box for Low Power AES Cryptosystem (저전력 AES 암호시스템을 위한 경량의 S-Box 설계)

  • Lee, Sang-Hong
    • The Journal of the Institute of Internet, Broadcasting and Communication
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    • v.22 no.1
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    • pp.1-6
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    • 2022
  • In this paper, the design of lightweight S-Box structure for implementing a low power AES cryptosystem based on composite field. In this approach, the S-Box is designed as a simple structure by which the three modules of x2, λ, and GF((22)2) merge into one module for improving the usable area and processing speed on GF(((22)2)2). The designed AES S-Box is modelled in Veilog-HDL at structural level, and a logic synthesis is also performed through the use of Xilinx ISE 14.7 tool, where Spartan 3s1500l is used as a target FPGA device. It is shown that the designed S-Box is correctly operated through simulation result, where ModelSim 10.3. is used for performing timing simulation.