• Title/Summary/Keyword: 유전적 거리

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Gene Flow of Oriental Fruit Moth, Grapholita molesta, Populations Analyzed by RAPD Molecular Markers (RAPD 분자지표를 이용한 복숭아순나방(Grapholita molesta)의 집단 유전적 변동 분석)

  • Son, Ye-Rim;Kim, Yong-Gyun
    • Korean journal of applied entomology
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    • v.47 no.1
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    • pp.37-44
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    • 2008
  • Oriental fruit moth, Grapholita molesta, is a serious pest on apples. To control this pest in an environmentally friendly method, mating disruption strategy using sex pheromone has been developed. Area-wide application of mating disruption has been needed to be effective, with little understanding on how much size of apple cultivating area should be treated in one time application of the mating disruption technique. On this matter, we needed to determine a minimal mating active zone of G. molesta that should be applied with mating disrupters to be effective. Molecular markers to discriminate a specific population should be developed to trace population migration for reproductive behaviors. Here we developed two effective molecular markers using random amplified polymorphic DNA (RAPD) technique. Different field populations of G. molesta, based on locations and seasons, were analyzed with these markers. In a specific location, G. molesta populations varied in genetic composition with different seasons. Different local populations showed differential variation according to their relative distances among apple orchards. In overall, genetic variation among different populations became lessen with progression of seasons.

Morpho-molecular characterization of diatom Skeletonema pseudocostatum(Thalassiosirales, Bacillariophyta) from the Korean coast (규조류 Skeletonema pseudocostatum Medlin (Thalassiosirales, Bacillariohyta)의 형태적 특징과 분자계통학적 위치)

  • Han, Kyong Ha;Li, Zhun;Park, Joon Sang;Youn, Joo Yeon;Kim, Hyun Jung;Kwak, Kyeong Yoon;Oh, Seok Jin;Shin, Hyeon Ho
    • Korean Journal of Environmental Biology
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    • v.38 no.1
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    • pp.21-29
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    • 2020
  • Morphology of a strain of unspecified Skeletonema species established from Korean coast was examined by light, fluorescence and scanning electron microscopy, and SSU(small subunit) and LSU(large subunit) rDNA of the strain were also sequenced. The specimen was characterized by solitary or short chains, and each cell contained 1-2 chloroplasts. The valve face was slightly convex, and the terminal fultoportula processes (TFPPs) were open and showed narrow distal ends that could be truncated or spiny with claw-like protrusions. The basal part of the TFPPs was tubular and oblique to the cell axis. The intercalary fultoportula processes (IFPPs) were also narrow, completely open, and joined in a 1 : 1 junction. Occasionally, one IFPP was connected with two opposing IFPPs. The morphological features of the specimen were identical to those of Skeletonema pseudocostatum. Molecular phylogeny based on SSU rDNA revealed that the Korean strain is nested within a clade comprising S. pseudocostatum and S. tropicum. However, based on D1-D2 LSU rDNA sequences, a clade including S. pseudocostatum and a Korean strain was separated from the S. tropicum clade. This indicates that the Korean strain can be identified as S. pseudocostatum. This species represents the first record from Korean coastal waters.

Millimeter-Wave CMOS On-Chip Dipole Antenna Design Optimization (밀리미터파 CMOS 온-칩 다이폴 안테나 설계 최적화)

  • Choi, GeunRyoung;Choi, Seung-Ho;Lee, Kook Joo;Kim, Moonil;Kim, Dowon;Jung, Dong Yun
    • The Journal of Korean Institute of Electromagnetic Engineering and Science
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    • v.24 no.6
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    • pp.595-601
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    • 2013
  • This paper presents an optimized design of a millimeter-wave on-chip dipole antenna using CMOS process. The serious flaw of the antenna using CMOS process is low radiation efficiency because of high permittivity and conductivity. To overcome the weakness, we need to widen radiation area in air and optimize distance between an antenna and a reflector. The radiation efficiency and bandwidth of the designed antenna are respectively 16.5 % and 22.3 % at 80 GHz. Systematic methods are attempt to analyze an effect on the antenna radiation efficiency. To widen radiation area in air, substrate cut angle and distance between the antenna and chip edge are adjusted. In addition, to optimize distance between an antenna and reflector, substrate thickness and distance between the antenna and a circuit ground plane are adjusted.

Genetic Differences and Variations in Freshwater Crab(Eriocheir sinensis) and Swimming Crab(Portunus trituberculatus) (참게(Eriocheir sinensis)와 꽃게(Portunus trituberculatus)의 유전적 차이와 변이)

  • Yoon, Jong-Man
    • Development and Reproduction
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    • v.10 no.1
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    • pp.19-32
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    • 2006
  • Genomic DNA isolated from two species of Korean freshwater crab(Eriocheir sinensis) and swimming crab(Portunus trituberculatus) was amplified several times by PCR reactions. The seven arbitrarily selected primers OPA-05, OPA-13, OPA-16, OPB-06, OPB-15, OPB-17 and OPD-10 were used to generate the identical, polymorphic, and specific fragments. 505 fragments were identified in the freshwater crab species, and 513 in the swimming crab from Buan: 81 specific fragments(16.0%) in the freshwater crab species and 100(19.5%) in the swimming crab. 165 identical fragments, with an average of 23.6 per primer, were observed in the freshwater crab species. 66 fragments, with an average of 9.4 per primer, were identified in the swimming crab species. The numbers of polymorphic fragments in the freshwater crab and swimming crab were 50 and 14, respectively. The oligonucleotides decamer primer OPB-17 generated identical DNA fragments, approximately 300 bp, in both the freshwater crab and swimming crab species. Compared separately, the average genetic difference was higher in the swimming crab than in the freshwater crab species. The average genetic difference was $0.726{\pm}0.004$ between the freshwater crab and swimming crab species. The dendrogram obtained by the seven primers indicates four genetic clusters: cluster 1(FRESHWATER 01), cluster 2(FRESHWATER 02, 03, 04, 05 and 06), cluster 3(FRESHWATER 07, 08, 09, 10 and 11), and cluster 4(SWIMMING 12, 13, 14, 15, 16, 17, 18, 19, 20, 21 and 22). The shortest genetic distance displaying significant molecular difference was between individuals SWIMMING no. 18 and SWIMMING no. 17 from swimming crab(0.096). Ultimately, individual no. 02 of the freshwater crab was most distantly related to freshwater crab no. 03(genetic distance = 0.770). As stated above, the potential of RAPD-PCR to identify diagnostic markers for the identification of two crab species has been demonstrated.

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주사형 정전용량 현미경(SCaM)의 개발

  • 김응규
    • 전기의세계
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    • v.42 no.9
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    • pp.6-11
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    • 1993
  • 미소탐침을 STM과 같이 PZT등의 압전액튜에이터로 대상물을 2차원 또는 2.5차원 주사해서 그 정전량을 화상화하는 주사형 정전용량 현미경(SCaM)의 개발에 대해서 기술했다. 광학현미경과 레이저현미경은 빛을 이용하기 때문에 파장의 제약을 받아 그 분해능의 한계는 0.3[.nu.m]정도이다. 이것에 대해 SCaM은 광학방식가 같은 분해능의 원리적 한계가 없고, 또한 광학상과는 다른 유전율상의 특성화상이 얻어진다. 이와같은 특징에 의해, 최종적으로 0.01[.mu.m]레벨의 분해능을 얻을 수 있는 실용레벨의 현미경을 시험제작함을 목적으로 하고 있다. 본 연구에서는 탐침과 시료표면간의 거리를 진동에 의해 미소로 변화시켰을 때의 정전용량의 변화를 포착하는 미분용량법을 이용했으며, 탐침높이 및 주사시에 있어서의 검출기 출력의 재현성, 즉 신호 검출방식으로서의 S/N이 양호한 동기검파를 이용했을 대해서 실험적 검토를 하였다. 이와같은 검파방식에 의해 잡음, 히스테리시스 등의 영향에 대해 개선이 되고, 분해능도 향상되었다. 더욱이 2.5차원 탐침 주사방식 미분용량형 정전용량 현미경에 의해 칼날 부분 선단부의 확대화상이 명료하게 얻어졌다. 그러나 실용적으로는 아직 불충분하다.

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Genetic Variation of Pinus densiflora Populations in South Korea Based on ESTP Markers (ESTP 표지를 이용한 국내 소나무 집단의 유전변이)

  • Ahn, Ji Young;Hong, Kyung Nak;Lee, Jei Wan;Hong, Yong Pyo;Kang, Hoduck
    • Korean Journal of Plant Resources
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    • v.28 no.2
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    • pp.279-289
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    • 2015
  • Genetic diversity and genetic differentiation of thirteen Pinus densiflora populations in South Korea were estimated using nine ESTP (Expressed Sequence Tag Polymorphism) markers. The numbers of allele and the effective allele were 2.2 and 1.8, respectively. The percentage of polymorphic loci (P) was 98.8%. The observed and the expected heterozygosity were 0.391 and 0.402, respectively, and the eleven populations except for Ahngang and Gangneung population were under Hardy-Weinberg equilibrium state. The level of genetic differentiation (Wright’s FST = 0.057) was higher than those of isozyme or nSSR markers. We could not find out any relationship between the genetic distance and geographic distribution among populations from cluster analysis. Also, the genetic differentiation between populations was not correlated with the geographic distance (r = 0.017 and P = 0.344 from Mantel test). From the result of FST-outlier analysis to identify a locus under selection, six loci were detected at confidence interval of 99% by the frequentist’s method. However, only three loci (sams2+AluⅠ, sams2+RsaⅠ, PtNCS_p14A9+HaeⅢ) were presumed as outliers by Bayesian method. The sams2+AluⅠ and sams2+RsaⅠlocus were originated from the sams2 gene and seemed to be the loci under balancing selection.

A Study on Network Redesign for Supply Chain Expansion (공급 사슬 확장을 위한 네트워크 재설계에 관한 연구)

  • Song, Byung Duk;Oh, Yonghui
    • The Journal of Society for e-Business Studies
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    • v.17 no.4
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    • pp.141-153
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    • 2012
  • According to the environment change of market, supply chain network needs to be redesigned for efficient provision of product within the budget constraint. Also, it is desired that the customer satisfaction such as on time delivery should be considered as an important element at redesigning of supply chain network in addition to the cost reduction. In this paper redesign of supply chain network for its expansion is treated as a problem situation and a related mathematical model is suggested. Moreover, the numerical examples about the total weighted distance of the redesigned supply chain network are presented with various budget constraints by using genetic algorithm to help the managerial decision.

The Geographical Distribution and Genetic Distance of Yellowfin Goby (Acanthogobius flavimanus) off the Coast of Korea (한국 연안에 서식하는 문절망둑의 지리적 분포와 유전적 거리)

  • Hyunsang Shin;Youn Choi;Kiyoung Lee
    • Journal of Environmental Science International
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    • v.33 no.4
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    • pp.235-247
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    • 2024
  • A total of 64 individuals of Acanthogobius flavimanus, which inhabit the coast of Korea, were collected from 8 regions from July to August 2023. A haplotype network and a phylogenetic tree were created. The genomic DNA of the target fish species was compared and analyzed with the genomic DNA of four regions in Japan downloaded from the National Center for Biotechnology Information (NCBI). In the haplotype network of Acanthogoboius flavimanus, Eocheong-do (EC) and Goseong (MAJ) exhibited low genetic similarity with other regions in Korea and Japan. The Phylogenetic tree showed that the population of MAJ exhibited differences in genetic structure compared to populations in other regions of Korea and Japan, indicating a distant relationship. Most marine organisms are known to migrate and spread via ocean currents, which is the most crucial factor promoting gene flow through larvae between populations. The haplotype of Acanthogobius flavimanus in MAJ differs from the haplotypes in Korea and Japan. The population in MAJ is believed to have limited genetic exchange due to the North Korea Cold Currents. We identified haplotype patterns based on the geographical distribution of Acanthogobius flavimanus off the coast of Korea and inferred that ocean currents have some influence on genetic distances.

Study for Classification of Facial Expression using Distance Features of Facial Landmarks (얼굴 랜드마크 거리 특징을 이용한 표정 분류에 대한 연구)

  • Bae, Jin Hee;Wang, Bo Hyeon;Lim, Joon S.
    • Journal of IKEEE
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    • v.25 no.4
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    • pp.613-618
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    • 2021
  • Facial expression recognition has long been established as a subject of continuous research in various fields. In this paper, the relationship between each landmark is analyzed using the features obtained by calculating the distance between the facial landmarks in the image, and five facial expressions are classified. We increased data and label reliability based on our labeling work with multiple observers. In addition, faces were recognized from the original data and landmark coordinates were extracted and used as features. A genetic algorithm was used to select features that are relatively more helpful for classification. We performed facial recognition classification and analysis with the method proposed in this paper, which shows the validity and effectiveness of the proposed method.

Diversity of I-SSR Variants in Gingko biloba L. Planted in 6 Regions of Korea (국내(國內) 6개(個) 은행(銀杏)나무 식재지(植栽地)에 있어서 I-SSR 변이체(變異體)의 다양성(多樣性))

  • Hong, Yong-Pyo;Cho, Kyung-Jin;Hong, Kyung-Nak;Shin, Eun-Myeong
    • Journal of Korean Society of Forest Science
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    • v.90 no.2
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    • pp.169-175
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    • 2001
  • Genomic DNAs were extracted from the leaves of 182 ginkgo trees (Ginkgo biloba L.) planted in 6 regions and subjected to the analysis of both I-SSR and RAPD markers. A total of 227 amplicon variants were generated by PCR using 15 I-SSR primers and 67 amplicons by PCR with 5 RAPD primers. Levels of genetic diversity within 6 populations were turned out to be similar (Shannon's Index, I-SSR : 0.35~0.40; mean of 0.38, RAPD : 0.31~0.38; mean of 0.35, combined : 0.35~0.40; mean of 0.37). Ranks of the level of genetic diversity estimated from I-SSR, RAPD, and combined data were not coincided each other. Majority of genetic diversity was allocated among individuals within populations (I-SSR : 94.31%, RAPD : 93.62%, combined : 93.57%), which resulted in pretty low level of population differentiation. Genetic differentiation between male and female groups was turned out to be quite low (I-SSR : 0.03, RAPD : 0.091, combined : 0.043), which slightly fluctuated when analysis was restricted to the data obtained from 3 regions where both male and female trees were sampled (I-SSR : 0.038, RAPD : 0.084, combined : 0.047). Genetic relationships among the populations, reconstructed by UPGMA, were not coincided with geographic affinity, which might be resulted from sharing of seed sources in some regions. Whereas independent cluster analyses with I-SSR data and RAPD data, respectively, reclassified by sexes revealed two sexual groups in which all the male and the female populations were clustered together, cluster analysis with combined data did not show clear sexual grouping.

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