• Title/Summary/Keyword: 미생물 군집 분석

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유류오염 토양에서 유류성분의 생분해와 무기오염 물질 함량의 관계성에 대한 예비 연구

  • 강진규;송윤구;문지원;이민희;이규호
    • Proceedings of the KSEEG Conference
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    • 2003.04a
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    • pp.241-244
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    • 2003
  • 유류오염 토양내 유류의 분해와 무기오염물질의 함량과의 관계성을 알아보기위해 부산 문헌지구의 유류 오염 토양 profile중 유류가 비교적 많은 두 층과 유기물이 다량 함유된 제주도 토양을 경유로 오염시킨 토양을 선택하여 유류가 분해 정도와 Pb, Zn, Cd, Ni의 함량을 측정 비교하였다. 토양 채취후 즉시 유류를 추출한 것, 15일간 별도의 미생물 영양원을 가하지 않고 습도와 통풍만을 행하여 토양내 존재하는 미생물들에 의하여만 유류가 분해되도록 한 것, $105^{\circ}C$에서 24시간 열처리를 행하여 미생물에 의한 분해보다는 물리적인 방법으로 비교적 강하게 처리한 것 세가지 경우에서 토양에서 추출한 유류를 분석한 결과 normal alkane이 서서히 상당량 분해되는 양상을 보여주었다. 토양내 Pb, Zn, Cd, Ni를 분석한 결과 부산 시료의 경우 두 층(B2, B3)모두 Cd은 검출한계 이하로, Ni의 경우 극소량의 함량을 보여주었다. Zn의 경우 B2는 28~29ug/g, B3는 12~14ug/g으로 세가지 경우 별 차이 없는 양상을 보여 주었다. 하지만, Pb의 경우 B2에서는 그 함량이 유류의 normal alkane의 분해와 함께 서서히 증가하는 경향을 확연히 보여주었으며, B3의 경우도 B2와 유사한 변화 양상을 보여주었다. 제주도 토양의 경우 Pb는 검출되지 않았고, Zn은 소량 검출되었다. Ba, Ni 함량은 normal alkane 분해에 따라 다소 증가하였다. 따라서, 본 예비실험을 통하여 유류오염 토양에서 유류의 분해와 일부 무기이온사이에는 관련성을 갖고 있으며, 이는 유류 분해정도를 파악하는 지시자로써 특정 무기 오염물질을 이용할 수 있을 가능성이 있으므로 좀더 이들 관계성에 대한 연구가 진행될 필요성이 있다고 판단된다.고 과학적으로 분석할 수 있는 방법이 될 수 있을 것으로 기대된다. 의미를 되새기는 것으로 짧은 연구를 시작하겠다. 등은 활성 값이 70% 이상으로 퇴적물 독성이 상대적으로 낮았다. 이중나선 DNA 함량은 28.4 % - 49%로 대조군에 비해서 감소가 크다. 대부분의 정점이 대조군의 30% 내외로 정점 간의 차이는 크지는 않다. 그러나 다른 측정자료와 같이 정점 22에서 18%로 최소치를 나타내고, 정점 2, 12에서 20% 내외의 값을 보인다. 종합적으로 볼 때 오염물질의 유입이 크고, 광양제철 인근 정점 들이 모두 다른 정점에 비해서 낮아서, 퇴적물 독성이 높은 정점으로 조사되었다.hiwo의 광합성 능력은 낮은 농도들에서는 대조구와 유사하였으나, 5 $\mu\textrm{g}$/l의 높은 농도에서는 초기에 매우 낮은 광합성 능력을 보이다가 시간이 경과하면서 대조군보다 더 높은 경향을 나타냈다. 이러한 결과는 식물플랑크톤이 benso[a]pyrene의 낮은 농도에서 노출될 때는 이 물질을 탄소원으로 사용할 가능성이 있음을 시사한다. 본 연구의 결과들은 연안해역에 benso[a]pyrene과 같은 지속성 유기오염물질이 유입되었을 때 내정여부에 따라 식물플랑크톤 군집내 종 천이와 일차생산력에 크게 영향을 미칠 수 있음을 시사한다.TEX>5.2개)였으며, 등급별 회수율은 각각 GI(8.5%), GII(13.4%), GIII(43.9%), GIV(34.2%)로 나타났다.ments of that period left both in Japan and Korea. "Hyojedo" in Korea is supposed to have been influenced by the letter design. Asite- is also considered to have been "Japan

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Influences of Addition of Jellyfish Powder to Bed Soil and Bacterial Community Structure of Bed Soil (해파리 분말의 상토 첨가물로서의 효과 및 상토의 미생물 군집 변화에 대한 연구)

  • Beck, Bo-Ram;Choi, Jae-Ho;Kim, Young-Rok;Cha, Ha-Eun;Do, Hyung-Ki;Hwang, Cher-Won
    • Korean Journal of Soil Science and Fertilizer
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    • v.45 no.2
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    • pp.227-234
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    • 2012
  • Recently, the population of toxic and/or unusable jellyfish is increasing during summer along the east coast of Korea, causing massive economical and ecological damage to fisheries, nuclear power plant and marine environment. To solve this problem, this study was carried out using jellyfish as a potential soil additive for horticulture. The jellyfish was solidified and homogenized, then mixed with a commercial bed soil. Allium tuberosum ROTH was planted to control bed soil (BS) and jellyfish powder mixed bed soil groups (Mixed bed soil, MBS), and following parameters were measured during five weeks: water content, electrical conductivity and growth of leaves. At the end of the experiment, bacterial community structures of each pot were analyzed by DGGE. The relative water adsorption of jellyfish powder was about 2.5 times greater compared to its dry weight. The water content of MBS group was significantly higher than BS group 6.5 to 14.2%, and the electric conductivity of MBS group was measured around 2.8 dS/m where BS group was resulted average of 1.8 dS/m. However, the leaves of BS group were grown 30% longer compared to MBS group. DGGE analysis of MBS group was shown in high number of phylum Bacteroidetes and increased diversity of Sphingobacteriia compared to BS group. Jellyfish powder as a soil additive surely will be a good candidate as humectant and microbiota stimulator, although there are several obstacles such as high electrical conductivity and residual alum salt which used for solidification of jellyfish.

Root Colonization and Quorum Sensing of the Antagonistic Bacterium Pseudomonas fluorescens 2112 involved in the Red-pepper Rhizosphere (생물방제균 Pseudomonas fluorescens 2112의 고추 근권정착능과 Quorum-sensing 기능)

  • Jung, Byung-Kwon;Kim, Yo-Hwan;Kim, Sang-Dal
    • Microbiology and Biotechnology Letters
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    • v.41 no.1
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    • pp.105-111
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    • 2013
  • Biofilm formation of multifunctional plant growth promoting rhizobacterium (PGPR), Pseudomonas fluorescens 2112 is necessary for P. fluorescens 2112 to have a positive impact on the rhizosphere of red-pepper. This study investigated whether signal molecules of the quorum sensing AHLs are produced in order to confirm biofilm formative ability. Through the use of Petri dish bioassays a blue circle formed evidence of AHLs. It was confirmed that P. fluorescens 2112 produced six-carbon-chain-long AHLs by TLC bioassay. The bacterial density of P. fluorescens 2112 on the top and bottom of pepper plant roots was estimated as $3{\times}10^5$ and $8{\times}10^3$ CFU/g root, respectively. P. fluorescens 2112 exist more with high-density of $3.5{\times}10^6$ CFU/g soil at a depth of 1 cm but at a low-density of $1.1{\times}10$ CFU/g soil at a depth of 5 cm, from the surface of rhizosphere soil. In addition, biofilm formation of P. fluorescens 2112 on the epidermises and the tips of the red-pepper roots were confirmed visually by SEM. Thus, the production of AHLs by P. fluorescens 2112 brings about quorum sensing signaling and the formation of biofilm on the roots which has a positive effect on economically important crops such as red-pepper by additionally producing a variety of antifungal substances and auxin.

Basic study on the biological and physicochemical properties of burnt forest soil for the ecological restoration by organic waste (유기성폐자원을 이용한 산불토양의 생태학적 복원을 위한 토양의 생물학적, 물리화학적 기초특성연구)

  • Jung, Young-Ryul;Song, In-Geun;Kim, Young-Jun
    • Journal of the Korea Organic Resources Recycling Association
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    • v.13 no.1
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    • pp.79-89
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    • 2005
  • Forest soils were analyzed on their biological and physicochemical properties for the ecological restoration of burnt forest soil using organic wastes and proper microorganisms. Three kinds of soil samples were collected from undamaged soil(US), naturally restoring soil(NS) and artificially restoring soil(AS). All soil samples were sandy soil and acidic soil, ranged pH 5.34~5.78. Moisture content was higher in the soil of NS region. And the others were similar. Total organic matter and soluble sugar were higher at the surface, generally. Heterotrophic soil microbes were abundant at the surface soil of NS and subsoil of AS. Dehydrogenase, cellulase and phosphatase activities were higher at the NS soil. Especially, Dehydrogenase activity as primary index of soil microbial process showed high correlationship with moisture content(r=0.90, P < 0.05).

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Complete genome sequence of Bacillus velezensis YC7010, an endophytic bacterium with plant growth promoting, antimicrobial and systemic resistance inducing activities in rice (식물생육촉진, 항균 및 저항성 유도 효과를 나타내는 내생세균 Bacillus velezensis YC7010의 유전체 염기서열)

  • Harun-Or-Rashid, Md.;Hwang, Jeong Hyeon;Chung, Young Ryun
    • Korean Journal of Microbiology
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    • v.53 no.4
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    • pp.329-331
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    • 2017
  • Bacillus velezensis YC7010 is an endophytic bacterium isolated from the rice rhizosphere in Jinju, Republic of Korea, with properties conductive to growth promotion, antibiosis and induced systemic resistance to significant, soil-borne rice fungal and bacterial pathogens. The genome of B. velezensis YC7010 comprises a 3,975,683 bp circular chromosome which consists of 3,790 protein-coding genes (86tRNA and 27rRNA genes). Based on genomic analysis, we identified genes involved in colonization and establishment inside the plant, biosynthesis of antibiotic compounds such as surfactin, plipapastatin, bacillibactin, and bacillaene, as well as the production of the phytohormones and volatile compounds which serve to promote the plants growth and development.

Effects of Electrical Conductivity on the Soil Microbial Community in a Controled Horticultural Land for Strawberry Cultivation (시설딸기재배지 토양에서 염류농도가 미생물 생태에 미치는 영향)

  • Lee, Young-Han;Ahn, Byung-Koo;Sonn, Yeon-Kyu
    • Korean Journal of Soil Science and Fertilizer
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    • v.44 no.5
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    • pp.830-835
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    • 2011
  • Total soil microbial activities have great impact to soil management for organic farming. This study was evaluated in the soil microbial community by fatty acid methyl ester (FAME) in a controlled horticultural field for strawberry organic farm. Experimental plots were prepared with a high level of soil electrical conductivity (EC) and a optimum level of soil EC. Soil microbial biomasses and communities of total bacteria, Gram-negative bacteria, Gram-positive bacteria, actinomycetes, fungi, and arbuscular mycorrhizal fungi in the high level of soil EC were significantly larger than those in the optimum level of soil EC. Lower ratios of cy17:0 to 16:$1{\omega}7c$ and cy19:0 to 18:$1{\omega}7c$ were found in the optimum level of soil EC than those in the high level of soil EC, indicating that microbial stress decreased.

Evaluation of the pre treatment tank filter media layer in LID technologies (LID 기법 전처리 시설 내 여재층 특성 평가)

  • Choi, Hye Seon;Jeon, Min Su;Geronimo, Franz Kevin;Reyes, Nash Jett;Kim, Lee Hyung
    • Proceedings of the Korea Water Resources Association Conference
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    • 2022.05a
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    • pp.367-367
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    • 2022
  • 토지이용의 고도화에 따라 비점오염원 부하는 증가하는 추세이며 기후변화에 따른 강우강도 증가 등으로 지표면에 축적된 고농도의 비점오염물질이 하천으로 유출, 수질오염을 가중시키고 있어 비점오염원 관리가 필요하다. LID 기법은 자연적 기작(mechanisms)과 공정(process)을 이용하여 생태계의 물질순환(물순환 포함)과 에너지 흐름이 원활하도록 조성하는 기법으로, 불투수층면에서 발생되는 강우유출수를 관리 가능하다. LID 시설에는 전처리 시설을 두어 초기 고농도의 입자상 물질을 저감시키고, 강우유출수 저류공간을 통한 유출저감, 첨두유량 등을 저감시킨다. 이러한 전처리 시설에는 유기물질 및 영양소의 생물학적 제거를 위한 미생물 서식공간의 제공 등의 역할을 수행하기 위하여 다양한 여재를 적용하고 있다. 본 연구는 비점오염물질 유입이 LID 기법 전처리 시설 내 여재층의 물리·화학적 및 생물학적 환경을 평가하였다. 3개 시설 모두 100%의 불투수층에서 발생되는 강우유출수를 처리하는 LID 시설을 연구대상으로 선정하였으며, 각각의 전처리 시설에는 자갈, 우드칩, 쇄석 등이 적용되어 있다. 퇴적물의 경우 가장 상부에 존재하는 층으로 퇴적물의 오염물질 농도는 2~10.7배 이상 매우 높게 나타났다. 우드칩의 경우 다른 여재에 비해 높은 함수량과 유기물 함량을 보였으며 이는 우드칩의 수분을 보유하는 능력과 거친 표면공극에 오염물질이 부착되기 때문으로 나타났다. 또한, 같은 무기성 여재인 쇄석과 자갈의 경우 여재 크기의 차이를 보임에도 불구하고 미생물의 군집구성과 함수량의 차이를 보이는 것으로 평가되었다. 유기물의 함량이 낮은 강우유출수의 생물학적 처리능력을 향상시키기 위해서는 유기성 여재가 필요하며, 다공성 무기 멀칭재를 적용하고 하부의 토양은 적정 유기물을 배합하여 질산화 및 탈질화 유도가 가능하도록 설계가 필요한 것으로 분석되었다.

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Community structure analysis of nitrifying biofilms by 16S rRNA targeted probe and fluorescence in situ hybridization (FISH)

  • Han, Dong-U;Kim, Dong-Jin
    • 한국생물공학회:학술대회논문집
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    • 2001.11a
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    • pp.282-285
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    • 2001
  • The microbial community structure and in situ spatial distribution of ammonia oxidizing and nitrite oxidizing bacteria in nitrifying biofilm of an upflow biological aerated filter system were investigated. The reactor had been continuously operated under high free ammonia concentration and low DO concentration for nitrite accumulation more than 2 years before the experiment. Fluorescence in situ hybridization

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Associated Bacterial Community Structures with the Growth of the Marine Centric Diatom Cyclotella meneghiniana: Evidence in Culture Stages (해양 원형 규조류 Cyclotella meneghiniana 성장 연관 미생물 군집구조 분석: 배양단계에 따른 증거)

  • Choi, Won-Ji;Park, Bum Soo;Guo, Ruoyu;Ki, Jang-Seu
    • Ocean and Polar Research
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    • v.39 no.4
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    • pp.245-255
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    • 2017
  • There are a number of pieces of evidences that suggest a link between marine diatoms and microorganisms, but knowledge about related microbial communities is greatly lacking. The present study investigated the microbial community structures related to the growth of the marine diatom Cyclotella meneghiniana. We collected free-living bacteria (FLB) and particle-associated bacteria (PAB) at each growth stage (e.g., lag, exponential, stationary and death) of the diatom, and analyzed their bacterial 16S rDNA using pyrosequencing. Metagenomics analysis showed that community structures of FLB and PAB differed considerably with the progress of growth stages. FLB showed higher diversity than PAB, but variation in the different growth stages of C. meneghiniana was more evident in PAB. The proportion of the genus Hoeflea, belonging to the order Rhizobiales, was dominant in both FLB and PAB, and it gradually increased with the growth of C. meneghiniana. However, Enhydrobacter clade tended to considerably decrease in PAB. In addition, Marinobacter decreased steadily in FLB, but first increased and then decreased in PAB. These results suggest that Hoeflea, Enhydrobacter, and Marinobacter may be closely related to the growth of diatom C. meneghiniana.

Analysis of Soil Properties and Microbial Communities for Mine Soil Vegetation (폐광산지역 토양 식생복원 과정 내 토양특성 및 미생물 군집 변화 분석)

  • Park, Min-Jeong;Yoon, Min-Ho;Nam, In-Hyun
    • Journal of Soil and Groundwater Environment
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    • v.20 no.3
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    • pp.83-91
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    • 2015
  • Mine soil contamination by high levels of metal ions that prevents the successful vegetation poses a serious problem. In the study presented here, we used the microbial biocatalyst of urease producing bacterium Sporosarcina pasteurii or plant extract based BioNeutro-GEM (BNG) agent. The ability of the biocatalysts to bioremediate contaminated soil from abandoned mine was examined by solid-state composting vegetation under field conditions. Treatment of mine soil with the 2 biocatalysts for 5 months resulted in pH increase and electric conductivity reduction compared to untreated control. Further analyses revealed that the microbial catalysts also promoted the root and shoot growth to the untreated control during the vegetation treatments. After the Sporosarcina pasteurii or plant extract based BNG treatment, the microbial community change was monitored by culture-independent pyrosequencing. These results demonstrate that the microbial biocatalysts could potentially be used in the soil bioremediation from mine-impacted area.