References
- Beleneva IA, Zhukova NV. 2006. Bacterial Communities of Some Brown and Red Algae from Peter the Great Bay, the Sea of Japan. Microbiology 75: 348-357. https://doi.org/10.1134/S0026261706030180
- Bolinches J, Lemos ML, Barja JL. 1988. Population dynamics of heterotrophic bacterial communities associated with Fucus vesiculosus and Ulva rigida in an estuary. Microb. Ecol. 15: 345-357. https://doi.org/10.1007/BF02012647
- Burke C, Thomas T, Lewis M, Steinberg P, Kjelleberg S. 2011. Composition, uniqueness and variability of the epiphytic bacterial community of the green alga Ulva australis. ISME J. 5: 590-600. https://doi.org/10.1038/ismej.2010.164
- Nakanishi K, Nishijima M, Nishimura M, Kuwano K, Saga N. 1996. Bacteria that induce morphogenesis in Ulva pertusa (Chlorophyta) grown under axenic conditions. J. Phycol. 32: 479-482. https://doi.org/10.1111/j.0022-3646.1996.00479.x
- Joint I, Tait K, Wheeler G. 2007. Cross-kingdom signalling: exploitation of bacterial quorum sensing molecules by the green seaweed Ulva. Philos. Trans. R. Soc. Lond. B Biol. Sci. 362: 1223-1233. https://doi.org/10.1098/rstb.2007.2047
- Bergey D, Harrison F, Breed R, Hammer B, Huntoon F. 1923. Genus II. Flavobacterium gen. nov, pp. 97-117. Bergey's Manual of Determinative Bacteriology, 1 Ed. Williams and Wilkins, Baltimore, MD.
- Bernardet JF, Segers P, Vancanneyt M, Berthe F, Kersters K, Vandamme P. 1996. Cutting a Gordian knot: emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom. nov.(basonym, Cytophaga aquatilis Strohl and Tait 1978). Int. J. Syst. Evol. Microbiol. 46: 128-148.
- Kang JY, Chun JS, Jahng KY. 2013. Flavobacterium aciduliphilum sp. nov., isolated from freshwater, and emended description of the genus Flavobacterium. Int. J. Syst. Evol. Microbiol. 63: 1633-1638 https://doi.org/10.1099/ijs.0.044495-0
- Dong K, Chen F, Du Y, Wang G. 2013. Flavobacterium enshiense sp. nov., isolated from soil, and emended descriptions of the genus Flavobacterium and Flavobacterium cauense, Flavobacterium saliperosum and Flavobacterium suncheonense. Int. J. Syst. Evol. Microbiol. 63: 886-892. https://doi.org/10.1099/ijs.0.039974-0
- Nogi Y, Soda K, Oikawa T. 2005. Flavobacterium frigidimaris sp. nov., isolated from Antarctic seawater. Syst. Appl. Microbiol. 28: 310-315. https://doi.org/10.1016/j.syapm.2005.01.001
- Yoon JH, Park S, Kang SJ, Oh SJ, Myung SC, Kim W. 2011. Flavobacterium ponti sp. nov., isolated from seawater. Int. J. Syst. Evol. Microbiol. 61: 81-85. https://doi.org/10.1099/ijs.0.017582-0
- Li A, H Liu, HC, Zhou YG. 2017. Flavobacterium orientale sp. nov., isolated from lake water. Int. J. Syst. Evol. Microbiol. 67: 108-112. https://doi.org/10.1099/ijsem.0.001544
- Shin SK, Ha Y, Cho YJ, Kwon S, Yong D, Yi H. 2017. Flavobacterium gilvum sp. nov., isolated from stream water. Int. J. Syst. Evol. Microbiol. 67: 153-157. https://doi.org/10.1099/ijsem.0.001594
- Hu G, Zhang J, Yang G, Li YY, Guan YT, Wang J, Hong Q. 2013. Flavobacterium yanchengense sp. nov., isolated from soil. Int. J. Syst. Evol. Microbiol. 63: 2848-2852 https://doi.org/10.1099/ijs.0.048801-0
- Hwang WM, Kim D, Kang K, Ahn TY. 2017. Flavobacterium eburneum sp. nov., isolated from reclaimed saline land soil. Int. J. Syst. Evol. Microbiol. 67: 55-59 https://doi.org/10.1099/ijsem.0.001568
- Lim CS, Oh YS, Lee JK, Park AR, Yoo JS, Rhee SK, Roh DH. 2011. Flavobacterium chungbukense sp. nov., isolated from soil. Int. J. Syst. Evol. Microbiol. 61: 2734-2739. https://doi.org/10.1099/ijs.0.028563-0
- Zhang G, Xian W, Chu Q, Yang J, Liu W, Yang L, et al. 2016. Flavobacterium terriphilum sp. nov., isolated from soil. Int. J. Syst. Evol. Microbiol. 66: 4276-4281. https://doi.org/10.1099/ijsem.0.001347
- Miyashita M, Fujimura S, Nakagawa Y, Nishizawa M, Tomizuka N, Nakagawa T, et al. 2010. Flavobacterium algicola sp. nov., isolated from marine algae. Int. J. Syst. Evol. Microbiol. 60: 344-348. https://doi.org/10.1099/ijs.0.009365-0
- Park SH, Kim JY, Kim YJ, Heo MS. 2015. Flavobacterium jejuensis sp. nov., isolated from marine brown alga Ecklonia cava. J. Microbiol. 53: 756-761. https://doi.org/10.1007/s12275-015-5280-4
- Bernardet J, Bowman J. 2006. The genus Flavobacterium, pp. 481-531. In Dworkin M, Falkow S, Rosenberg E, Schleifer KH, Stackebrandt E (eds.), The Prokaryotes, Springer, New York. USA.
- Bernardet JF, Bowman JP. 2011. Genus I. Flavobacterium Bergey et al. 1923. In Whitman, W (ed.), pp. 112-154. Bergey's Manual of Systematic Bacteriology, 2 Ed. Williams and Wilkins, Baltimore, MD.
- Kuo I, Saw J, Kapan DD, Christensen S, Kaneshiro KY, Donachie SP. 2013. Flavobacterium akiainvivens sp. nov., from decaying wood of Wikstroemiaoahuensis, Hawai'i, and emended description of the genus Flavobacterium. Int. J. Syst. Evol. Microbiol. 63: 3280-3286. https://doi.org/10.1099/ijs.0.047217-0
- Bowman JP. 2000. Description of Cellulophaga algicola sp. nov., isolated from the surfaces of Antarctic algae, and reclassification of Cytophaga uliginosa (ZoBell and Upham 1944) Reichenbach 1989 as Cellulophaga uliginosa comb. nov. Int. J. Syst. Evol. Microbiol. 50: 1861-1868. https://doi.org/10.1099/00207713-50-5-1861
- Wilson K. 1987. Preparation of genomic DNA from bacteria. pp. 2.4.1-2.4.5. Current Protocols in Molecular Biology. Green Publishing and Wiley-Interscience, New York, NY, USA.
- Weisburg WG, Barns SM, Pelletier DA, Lane DJ. 1991. 16S ribosomal DNA amplification for phylogenetic study. J. Bacteriol. 173: 697-703. https://doi.org/10.1128/jb.173.2.697-703.1991
- Chun J, Lee JH, Jung Y, Kim M, Kim S, Kim BK, et al. 2007. EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int. J. Syst. Evol. Microbiol. 57: 2259-2261. https://doi.org/10.1099/ijs.0.64915-0
- Kim OS, Cho YJ, Lee K, Yoon SH, Kim M, Na H, et al. 2012. Intruducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. Int. J. Syst. Evol. Microbiol. 62: 716-721 https://doi.org/10.1099/ijs.0.038075-0
- Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25: 4876-4882. https://doi.org/10.1093/nar/25.24.4876
- Hall TA. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic. Acids. Symp. Ser. 41: 95-98.
- Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. 2013. MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0. Mol. Biol. Evol. 30: 2725-2729. https://doi.org/10.1093/molbev/mst197
- Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425
- Kluge AG, Farris FS. 1969. Quantitative phyletics and the evolution of anurans. Syst. Biol. 18: 1-32. https://doi.org/10.1093/sysbio/18.1.1
- Felsenstein J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17: 368-376. https://doi.org/10.1007/BF01734359
- Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791. https://doi.org/10.1111/j.1558-5646.1985.tb00420.x
- Ezaki T, Hashimoto Y, Yabuuchi E. 1989. Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int. J. Syst. Evol. Microbiol. 39: 224-229.
- Sasser M. 1990. Identification of bacteria by gas chromatography of cellular fatty acids, MIDI Technical Note 101.
- Minnikin DE, O'Donnell AG, Goodfellow M, Alderson G, Athalye M, Schaal A, et al. 1984. An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J. Microbiol. Methods 2: 233-241. https://doi.org/10.1016/0167-7012(84)90018-6
- Ngo HT, Kook M, Yi TH. 2015. Flavobacterium daemonensis sp. nov., isolated from Daemo Mountain soil. Int. J. Syst. Evol. Microbiol. 65: 983-989. https://doi.org/10.1099/ijs.0.000051
- Wayne LG, Brenner DJ, Colwell RR, Grimont PAD, Kandler O, Krichevsky MI, et al. 1987. International committee on systematic bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int. J. Syst. Bacteriol. 37: 463-464. https://doi.org/10.1099/00207713-37-4-463
- Stackebrandt E, Ebers J. 2006. Taxonomic parameters revisited: tarnished gold standards. Microbiol. Today 11: 152-155.
- Joung Y, Kim H, Joh K. 2013. Flavobacterium jumunjinense sp. nov., isolated from a lagoon, and emended descriptions of Flavobacterium cheniae, Flavobacterium dongtanense and Flavobacterium gelidilacus. Int. J. Syst. Evol. Microbiol. 63: 3937-3943. https://doi.org/10.1099/ijs.0.045286-0
- Zhang J, Jiang RB, Zhang XX, Hang BJ, He J, Li SP. 2010. Flavobacterium haoranii sp. nov., a cypermethrin-degrading bacterium isolated from a wastewater treatment system. Int. J. Syst. Evol. Microbiol. 60: 2882-2886. https://doi.org/10.1099/ijs.0.020776-0
- Xiao YP, Hui W, Lee JS, Lee KC, Quan ZX. 2011. Flavobacterium dongtanense sp. nov., isolated from the rhizosphere of a wetland reed. Int. J. Syst. Evol. Microbiol. 61: 343-346. https://doi.org/10.1099/ijs.0.022301-0
- Nedashkovskaya OI, Balabanova LA, Zhukova NV, Kim SJ, Bakunina IY, Rhee SK. 2014. Flavobacterium ahnfeltiae sp. nov., a new marine polysaccharide-degrading bacterium isolated from a Pacific red alga. Arch. Microbiol. 196: 745-752. https://doi.org/10.1007/s00203-014-1010-2
Cited by
- Flavobacterium alkalisoli sp. nov., isolated from rhizosphere soil of Suaeda salsa vol.70, pp.6, 2019, https://doi.org/10.1099/ijsem.0.004255
- Flavobacterium phycosphaerae sp. nov. isolated from the phycosphere of Microcystis aeruginosa vol.71, pp.3, 2019, https://doi.org/10.1099/ijsem.0.004735