Horticultural Science & Technology (원예과학기술지)

Korean Society of Horticultural Science (한국원예학회)
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Analysis of the Genetic Diversity of Radish Germplasm through SSR Markers Derived from Chinese Cabbage

배추 SSR 마커를 이용한 무의 육성 계통 및 수집종의 유전적 다양성 분석

  • Park, Suhyoung (Vegetable Research Division, National Institute of Horticultural & Herbal Science) ;
  • Choi, Su Ryun (Department of Horticulture, Chungnam National University) ;
  • Lee, Jung-Soo (Vegetable Research Division, National Institute of Horticultural & Herbal Science) ;
  • Nguyen, Van Dan (Department of Horticulture, Chungnam National University) ;
  • Kim, Sunggil (Department of Plant Biotechnology, Chonnam National University) ;
  • Lim, Yong Pyo (Department of Horticulture, Chungnam National University)
  • Received : 2012.07.27
  • Accepted : 2013.04.02
  • Published : 2013.08.31
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Abstract

Since the early 1980s, the National Institute of Horticultural & Herbal Sciences has been breeding and collecting diverse radish breeds to select those samples with better horticultural characteristics, to ultimately expand and develop as good radish produce. Genetic diversity is a crucial factor in crop improvement and therefore it is very important to obtain various variations through sample collection. The collected samples were compared with one another in order to assess the level of diversity among the collections, and this procedure allowed for increased application of the gathered resources and aided in determining the direction to secure further samples. Towards this end, this experiment was conducted in order to examine whether the SSR markers derived from Chinese cabbage samples could be transferred to the radish samples. Among the radish breeding lines and introduced resources, 44 lines were used as materials to analyze the genotype using 22 SSR markers selected. As a result, the analysis showed that among all the selected markers, 'cnu_m139' and 'cnu_m289' were the most useful markers for diversity evaluation. The genetic relationship of the radish genetic resources showed that the geographic origins affected the diversity. Furthermore, the different types of radish groups were also determined by the year they were bred. This result demonstrated that there are differences between the older radish breeds and the more recently developed radish breeds. Even though a relatively small number of markers were used in the analysis, it was possible to distinguish whether the radish was bred 30 years ago or in the 2000s, and that the similar physical shapes comprised a particular group, showed that the SSR markers can indeed be successfully applied to to study the diversity within radish breeding lines. Through the results of this study, it can be concluded that the SSR marker developed for the Chinese cabbage can be applied to examine the genetic diversity and analyze the relationship (genetic resource determination) of radish.

국립원예특작과학원에서는 무의 품종 육성 기반 확장을 위해 다양한 무 품종을 수집하여 재배한 후 원예적 특성이 양호한 자원을 선발하여 계통으로 육성하는 작업을 1980년대 초반부터 지속적으로 수행하여 왔다. 유전적 다양성은 작물의 개량에 있어 주요 소재이기에 자원의 수집을 통한 변이의 확보는 매우 중요하다. 자원 수집과 더불어 확보한 자원간의 다양성 정도를 측정함으로써 자원의 활용도를 높이고 자원확보의 방향성을 재고하는데 도움을 줄 수도 있다. 이런 연구를 위하여 이미 배추에서 개발된 SSR 마커를 이용하여 계통분류학상 가까운 관계에 있는 무에 적용이 가능한지를 검토하기 위해 본 실험을 실시하였다. 무 육성 계통과 도입자원 중에서 44점의 보유 유전자원을 재료로 하여 22종의 선발한 마커로 유전형을 분석하였으며, 이 중에서 'cnu_m139'와 'cnu_m289' 등이 다형성 검증에 유용한 마커임을 확인할 수 있었다. 무 유전자원의 유전적 유연관계 분석 결과, 무는 지역적 유래에 따라 차이를 보였으며, 품종 육성 연도에 따라 일부 그룹을 형성함을 알 수 있어, 최근 육성되고 있는 품종들과 기존의 품종과의 차이를 보여주는 것으로 나타났다. 또한 각 그룹에 해당하는 계통들의 특성을 제시함으로써 차후 연구결과의 활용도를 높이고자 하였다. 비교적 적은 수의 마커로 분석했음에도 30년 이전에 육성종과 근래에 육성한 2000년대에 육성종을 구분하고, 한 그룹 내에서 비교적 형태적으로 유사한 개체들이 그룹을 구성하는 대부분을 나타낸 결과는 SSR 마커가 무에 성공적으로 적용 가능함을 시사한다고 할 수 있다. 본 연구결과를 통해 배추에서 개발한 SSR 마커를 이용하여 무에 대한 유전적 다양성 및 유연관계 분석(유전자원 식별)에 적용이 가능한 것으로 판단된다.

Keywords

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