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ManBIF: a Program for Mining and Managing Biobank Impact Factor Data

  • Yu, Ki-Jin (Division of Bio-Medical Informatics, Center for Genome Science, National Institute of Health) ;
  • Nam, Jung-Min (Division of Korea BioBank, Center for Genome Science, National Institute of Health) ;
  • Her, Yun (Division of Korea BioBank, Center for Genome Science, National Institute of Health) ;
  • Chu, Min-Seock (Division of Korea BioBank, Center for Genome Science, National Institute of Health) ;
  • Seo, Hyung-Seok (Division of Korea BioBank, Center for Genome Science, National Institute of Health) ;
  • Kim, Jun-Woo (Division of Korea BioBank, Center for Genome Science, National Institute of Health) ;
  • Jeon, Jae-Pil (Division of Korea BioBank, Center for Genome Science, National Institute of Health) ;
  • Park, Hye-Kyung (Division of Korea BioBank, Center for Genome Science, National Institute of Health) ;
  • Park, Kie-Jung (Division of Bio-Medical Informatics, Center for Genome Science, National Institute of Health)
  • Accepted : 2011.03.07
  • Published : 2011.03.31

Abstract

Biobank Impact Factor (BIF), which is a very effective criterion to evaluate the activity of biobanks, can be estimated by the citation information of biobanks from scientific papers. We have developed a program, ManBIF, to investigate the citation information from PDF files in the literature. The program manages a dictionary for expressions to represent biobanks and their resources, mines the citation information by converting PDF files to text files and searching with a dictionary, and produces a statistical report file. It can be used as an important tool by biobanks.

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References

  1. GNU General Public License (GPL) (2009). Java Excel API - A Java API to read, write and modify Excel spreadsheets. http://www.jexcelapi.org.
  2. Gospodnetic, O. and Hatcher, E. (2010). Lucene in Action, Second Edition (Manning Publications).
  3. Lowagie, B. and Soares, P. (2010). iText in Action, Second Edition (Manning Publications).
  4. Zika, E., Paci, Daniele., Schulte in den Baumen, T., Braun, A., RijKers-Defrasne, S., Deschénes, M., Fortier, I., Laage-Hellman, J., Scerri, C. A. and Ibarreta, D. (2010) Biobanks in Europe: Prospects for Harmonisation and Networking, JRC scientific and Technical Reports.