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Organizing an in-class hackathon to correct PDF-to-text conversion errors of Genomics & Informatics 1.0

  • Kim, Sunho;Kim, Royoung;Nam, Hee-Jo;Kim, Ryeo-Gyeong;Ko, Enjin;Kim, Han-Su;Shin, Jihye;Cho, Daeun;Jin, Yurhee;Bae, Soyeon;Jo, Ye Won;Jeong, San Ah;Kim, Yena;Ahn, Seoyeon;Jang, Bomi;Seong, Jiheyon;Lee, Yujin;Seo, Si Eun;Kim, Yujin;Kim, Ha-Jeong;Kim, Hyeji;Sung, Hye-Lynn;Lho, Hyoyoung;Koo, Jaywon;Chu, Jion;Lim, Juwon;Kim, Youngju;Lee, Kyungyeon;Lim, Yuri;Kim, Meongeun;Hwang, Seonjeong;Han, Shinhye;Bae, Sohyeun;Kim, Sua;Yoo, Suhyeon;Seo, Yeonjeong;Shin, Yerim;Kim, Yonsoo;Ko, You-Jung;Baek, Jihee;Hyun, Hyejin;Choi, Hyemin;Oh, Ji-Hye;Kim, Da-Young;Park, Hyun-Seok
    • Genomics & Informatics
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    • v.18 no.3
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    • pp.33.1-33.7
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    • 2020
  • This paper describes a community effort to improve earlier versions of the full-text corpus of Genomics & Informatics by semi-automatically detecting and correcting PDF-to-text conversion errors and optical character recognition errors during the first hackathon of Genomics & Informatics Annotation Hackathon (GIAH) event. Extracting text from multi-column biomedical documents such as Genomics & Informatics is known to be notoriously difficult. The hackathon was piloted as part of a coding competition of the ELTEC College of Engineering at Ewha Womans University in order to enable researchers and students to create or annotate their own versions of the Genomics & Informatics corpus, to gain and create knowledge about corpus linguistics, and simultaneously to acquire tangible and transferable skills. The proposed projects during the hackathon harness an internal database containing different versions of the corpus and annotations.

Phytochemical Constituents of Cirsium setidens

  • Lee, Won-Bin;Kwon, Hak-Cheol;Park, Sang-Zin;Min, Yong-Deuk;Lee, Sung-Ok;Kim, Soo-Hak;Yang, Min-Cheol;Chung, Ae-Kyung;Lee, Kyu-Ha;Nam, Jung-Hwan;Lee, Jong-Soon;Lee, Kang-Ro
    • Proceedings of the PSK Conference
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    • 2002.04a
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    • pp.198.1-198.1
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    • 2002
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Xylazole inhibits NO-cGMP pathway in fetal rat nerve cells

  • Wang, Xinyu;Wu, Yue;Liu, Lin;Bai, Hui;Zhang, Zhiheng;Zhao, Mingchao;Ma, Tianwen;Song, Xiaopeng;Jia, Lina;Lv, Liangyu;Yu, Yue;Xu, Xinyu;Chen, Hong;Gao, Li
    • Journal of Veterinary Science
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    • v.23 no.1
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    • pp.16.1-16.13
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    • 2022
  • Background: Xylazole (Xyl) is a veterinary anesthetic that is structurally and functionally similar to xylazine. However, the effects of Xyl in vitro remain unknown. Objectives: This study aimed to investigate the anesthetic mechanism of Xyl using fetal rat nerve cells treated with Xyl. Methods: Fetal rat nerve cells cultured for seven days were treated with 10, 20, 30, and 40 ㎍/ mL Xyl for 0, 5, 10, 15, 20, 25, 30, 45, 60, 90, and 120 min. Variations of amino acid neurotransmitters (AANTs), Nitric oxide-Cyclic GMP (NO-cGMP) signaling pathway, and ATPase were evaluated. Results: Xyl decreased the levels of cGMP and NO in nerve cells. Furthermore, Xyl affected the AANT content and Na+-K+-ATPase and Ca2+-Mg2+-ATPase activity in nerve cells. These findings suggested that Xyl inhibited the NO-cGMP signaling pathway in nerve cells in vitro. Conclusions: This study provided new evidence that the anesthetic and analgesic effects of Xyl are related to the inhibition of the NO-cGMP signaling pathway.

Sesquiterpenes and Sterols from Aster glehni

  • Min, Yong-Deuk;Kwon, Hak-Cheol;Choi, Sang-Zin;Lee, Sung-Ok;Kim, Soo-Hak;Lee, Won-Bin;Yang, Min-Cheol;Chung, Ae-Kyung;Lee, Kyu-Ha;Nam, Kyu-Ha;Lee, Kang-Ro
    • Proceedings of the PSK Conference
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    • 2002.04a
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    • pp.200.2-200.2
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    • 2002
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