• Journal of the Korean Society of Marine Environment & Safety
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• v.20 no.3
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• pp.259-269
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• 2014

The objectives of this study to determine seasonal changes in species composition and abundance of fish and decapod assemblage, and the relationships between environmental factors and their abundance in an eelgrass bed of Jindong Bay. A total of 26 fish species and 29 decapod species were collected by a small beam trawl from an eelgrass bed in Jindong Bay in 2002. The dominant fish species were Hexagrammos otakii, Pholis neulosa and P. fangi and these accounted for 48.4 % in the total number of individuals. Dominant decapod taxa were Palaemon macrodactylus, Charybdis japonica, Pagurus minutus and C. bimaculata. These were primarily small species or early juveniles of larger species. Species composition and abundance varied greatly showing a peak in the number of individuals in April and May, and peak biomass in fish in July and decapods in August. Catch rate was low in winter months both in fish and in decapod. Seasonal changes in the abundance of fishes and decapods corresponded with eelgrass biomass and abundance of food organisms indirectly.

• Journal of the Korean earth science society
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• v.26 no.6
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• pp.597-602
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• 2005

The Late Quaternary palynoflora from an archaeological site in Piseo-ri, Muan, Korea consists predominately of deciduous broadleaved angiosperms and subordinately of herbs and conifers. Dominant taxa are Polypodiaceae, Taxodiaceae-Cupressaceae-Taxaceae, Alnus, Carpinus, deciduous Quercus, Compositae and Gramineae. The palynoflora dated 43,000-18,000 yr BP, corresponding to the last glacial period, is similar to the modern vegetation of the cool temperate deciduous broadleaved forest in the middle part of the Korean Peninsula. Based on palynofloral composition, three palynozones are recognized. Zone I represents a cool temperate deciduous broadleaved forest, composed of Polypodiaceae, Taxodiaceae-Cupressaceae-Taxaceae, Alnus and D. Quercus, and is characterized by persistent occurrence of warm temperate taxa. Zone II shows drastic decrease in Polypodiaceae, Taxodiaceae-Cupressaceae-Taxaceae, and increase in herbs. This zone reflects a cool temperate deciduous broadleaved forest with scattered open grasslands. Zone III is characterized by dominance in herbs and increase in conifers. The palynofloral composition suggests a cool temperate climate, and variation in occurrences of main taxa indicates that climatic conditions gradually became cold and dry.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.31 no.5
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• pp.749-759
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• 1998

Distribution of zooplankton abundance was studied in the front zone in the East Sea in November, 1996, Averaged total abundance in the front zone was less than that in the nearby cold surface water areas but more than that in the nearby warm surface water areas. The number of taxa was the greatest in the upper layer of mixing. Abundance and the number of tun in the front zone were contributed by the cold water and the warm water, respectively. Inspite of the differences in sampling time (day vs night), the species composition and abundance distribution were similar at two sites within cold or warm water area, However, they were quite different at two sites in the front zone although the sampling time of the day was the same. from this, the history of mixing was believed to be the most important factor for the species composition and abundance distribution in the front zone. Zooplankton distribution in the study area was mainly controlled by the dominant cold water Copepod Species Metridia paoifica, the only taxon that showed significant diet vertical migration. Most other taxa showed no significant diel vortical migration, Seawater temperature also affected zooplankton distribution. Positive correlations in the warm area, weak negative correlations in the cold water area, and no significant correlation in the front zone were obtained in general between the seawater temperature and the abundances of the major taxa.

• Korean Journal of Ichthyology
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• v.27 no.4
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• pp.284-292
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• 2015

Monthly variation of species composition and abundance of fish eggs were examined to know the spawning time and location of the fishes inhabiting the coastal region of Jejudo Island. Samplings had been performed at the four locations (Jeju port, Seongsanpo, Seogwipo port and Chagwido) with a bongo net which was towed monthly at the sea surface from August 2006 to July 2007. The fish eggs were identified based on phylogenetic analyses with the DNA sequences generated through PCR-amplification and sequencing of the mitochondrial cytochrome b gene. Among a total of 43 taxa classified during the study period, 34 were identified to species, 4 to families, and the remaining 5 were unidentified. Of them, 23 taxa were occurred at Jeju port, 21 at Seongsanpo, 19 at Seogwipo port and 18 at Chagwido, whereas 15 taxa were found in September 2006, 12 in June 2007, 6 to 8 in August 2006 and January~May 2007, 5 in each October and November 2006, 3 in each December 2006 and July 2007. Among 34 species of fish eggs, Engraulis japonicus and Callanthias japonicus most frequently appeared at 16 times out of 48 observations in total. When those eggs were collected, the surface seawater temperature ranged $14.0{\sim}28.6^{\circ}C$ for E. japonicus and $14.9{\sim}20.5^{\circ}C$ for C. japonicus. The success rates of PCR-amplification and species identification in this study were 68.3% and 79.1%, respectively.

• The Korean Journal of Physiology and Pharmacology
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• v.25 no.6
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• pp.575-583
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• 2021

Composition of the gut microbiota changes with aging and plays an important role in age-associated disease such as metabolic syndrome, cancer, and neurodegeneration. The gut microbiota composition oscillates through the day, and the disruption of their diurnal rhythm results in gut dysbiosis leading to metabolic and immune dysfunctions. It is well documented that circadian rhythm changes with age in several biological functions such as sleep, body temperature, and hormone secretion. However, it is not defined whether the diurnal pattern of gut microbial composition is affected by aging. To evaluate aging effects on the diurnal pattern of the gut microbiome, we evaluated the taxa profiles of cecal contents obtained from young and aged mice of both sexes at daytime and nighttime points by 16S rRNA gene sequencing. At the phylum level, the ratio of Firmicutes to Bacteroidetes and the relative abundances of Verrucomicrobia and Cyanobacteria were increased in aged male mice at night compared with that of young male mice. Meanwhile, the relative abundances of Sutterellaceae, Alloprevotella, Lachnospiraceae UCG-001, and Parasutterella increased in aged female mice at night compared with that of young female mice. The Lachnospiraceae NK4A136 group relative abundance increased in aged mice of both sexes but at opposite time points. These results showed the changes in diurnal patterns of gut microbial composition with aging, which varied depending on the sex of the host. We suggest that disturbed diurnal patterns of the gut microbiome can be a factor for the underlying mechanism of age-associated gut dysbiosis.

• Pediatric Gastroenterology, Hepatology & Nutrition
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• v.26 no.2
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• pp.99-115
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• 2023

Purpose: Exclusive breastfeeding promotes gut microbial compositions associated with lower rates of metabolic and autoimmune diseases. Its cessation is implicated in increased microbiome-metabolome discordance, suggesting a vulnerability to dietary changes. Formula supplementation is common within our low-income, ethnic-minority community. We studied exclusively breastfed (EBF) neonates' early microbiome-metabolome coupling in efforts to build foundational knowledge needed to target this inequality. Methods: Maternal surveys and stool samples from seven EBF neonates at first transitional stool (0-24 hours), discharge (30-48 hours), and at first appointment (days 3-5) were collected. Survey included demographics, feeding method, medications, medical history and tobacco and alcohol use. Stool samples were processed for 16S rRNA gene sequencing and lipid analysis by gas chromatography-mass spectrometry. Alpha and beta diversity analyses and Procrustes randomization for associations were carried out. Results: Firmicutes, Proteobacteria, Bacteroidetes and Actinobacteria were the most abundant taxa. Variation in microbiome composition was greater between individuals than within (p=0.001). Palmitic, oleic, stearic, and linoleic acids were the most abundant lipids. Variation in lipid composition was greater between individuals than within (p=0.040). Multivariate composition of the metabolome, but not microbiome, correlated with time (p=0.030). Total lipids, saturated lipids, and unsaturated lipids concentrations increased over time (p=0.012, p=0.008, p=0.023). Alpha diversity did not correlate with time (p=0.403). Microbiome composition was not associated with each samples' metabolome (p=0.450). Conclusion: Neonate gut microbiomes were unique to each neonate; respective metabolome profiles demonstrated generalizable temporal developments. The overall variability suggests potential interplay between influences including maternal breastmilk composition, amount consumed and living environment.

• Korean Journal of Environmental Biology
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• v.37 no.4
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• pp.664-671
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• 2019

This study was conducted to investigate the environmental impact of the construction of the Yeongju Dam, located near the upper stream of the Nakdong River, on benthic macroinvertebrates. The investigation was conducted four times from 2015 to 2016 and the composition of the benthic macroinvertebrate fauna from the four surveyed sites was compared. After the dam construction, the number of benthic macroinvertebrate species decreased and the species composition ratio of the E.P.T taxa(Ephemeroptera, Plecoptera, and Trichoptera) decreased, which favored the previous environment and the large riverbed structure. However, the species composition ratio of the O.C.H taxa (Odonata, Coleoptera, and Hemiptera), which favored the reservoir environment, increased. For the pattern of changes in the functional habitat groups, the proportion of 'Clinger(CL)' taxa decreased and the 'Burrower(BU), Climber(CB), Sprawler(SP), Swimmer(SW)' taxa increased in all surveys after the dam construction. A cluster stability comparison showed that the 'Stability Group II' species of St.2 and St.3 showed a drastic decrease. The average Benthic Macroinvertebrate Index(BMI) of all the survey sites in 2016 was lower than that in 2015. This research confirmed the temporal and spatial changes in the habitat type and community structure of the benthic macroinvertebrates resulting from the dam construction.

• Korean Journal of Environmental Biology
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• v.35 no.4
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• pp.640-647
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• 2017

The need for an efficient sampling technique to collect aquatic organisms has risen with the increase of interest in rice paddy fields, which have been recognized as important ecosystems supporting biodiversity. In the present study, a submerged funnel trap used with the assistance of attracting agents (fish meal and chemical light) was designed as an easy, objective and quantitative tool for collecting aquatic organisms in the rice paddy fields. The preference for collecting aquatic organisms as a means for attracting agents was analyzed using a generalized linear mixed model. Also, based on the data of previous research, we compared the community composition of the aquatic macroinvertebrates, which were collected using the quadrat method, and newly designed submerged funnel traps, by analyzing non-metric multidimensional scaling. The results showed that the catching efficiency of 18 of the total 65 taxa was affected by the attracting agents. 12 taxa including Pomacea canaliculata, Hippeutis cantori, Austropeplea ollula, Erpobdella lineata, Ostracoda spp. Branchinella kugenumaensis, Hydaticus grammicus, Rhantus pulverosus, Chironomidae spp., Rana nigromaculata, Cobitidae spp. etc., favored fish meal and 6 taxa including Ischnura asiatica, Coenagrionidae spp. Sternolophus rufipes etc., were attracted by chemical light. The submerged funnel trap used as a measurement tool for biodiversity was less applicable than the quadrat method; however, it was more effective for the selective collection of specific taxa. We expect that this newly designed trap can be a simple and quantitative method for collecting aquatic organisms, and could be used for long term and extensive surveys in rice paddy fields in the future.

• Journal of Marine Life Science
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• v.5 no.2
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• pp.99-106
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• 2020

To investigate effect of variation in physiochemical conditions due to river discharge on phytoplankton, field surveys were conducted in the Seomjin and Yeongsan River estuaries from April to November 2016. The concentrations of DIN and DSi in Seomjin River estuary were gradually low as distance from upstream. On the other hands, the concentrations of DIN and DSi in Yeongsan River estuary were critically high at upstream, due to which is characterized as semi-enclosed eutrophic area. A total of 12 phytoplankton pigments were analyzed, and the distribution of each taxa was investigated using indicator for each phytoplankton taxa. Fucoxanthin, an indicator pigment of diatoms, showed an average of 0.61±1.00 ㎍ l^-1 and 0.76±1.22 ㎍ l^-1 in the Seomjin and Yeongsan River estuaries, respectively. Concentration of fucoxanthin was more than twice that of other pigments except chlorophyll a., indicating that diatoms were dominant taxa. Peridinin, an indicator pigment of dinoflagellate, showed some similar tendency to the microscopic observation, but mismatch results were also present, indicating a technical limitation of pigment analysis. Chlorophyll b, alloxanthin, and zeaxanthin, which are indicator pigments of green algae, cryptomonads, and cyanobacteria, were detected in both estuaries even though those taxa were not detected in microscopic observation. This indicates that the two estuaries were affected by freshwater species. Here, we can suggest that phytoplankton composition in estuary was directly influenced by the inflow from upstream. In particular, the phytoplankton population dynamics in Yeongsan River estuary was greatly associated with a large-scale artificial dyke, especially in summer rainy season. On the other hands, the seasonal and horizontal distribution of phytoplankton in Seomjin River estuary has changed along the salinity gradients and inflow-related changes.

• Journal of Wetlands Research
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• v.9 no.2
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• pp.45-55
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• 2007

Flora, actual vegetation map, distribution area by the life form, primary productivity and annual primary production by the vascular hydrophytes and hygrophytes were investigated in the Upo wetland, Changnyeong-gun, Gyeongsangnam-do, Korea from May 2005 to March 2006. The flora of Upo, Mokpo, Sajipo, Jokjibyeol, Topyeongcheon upstream, and Topyeongcheon downstream were composed of 263, 233, 244, 182, 190, and 178 taxa, respectively. The flora of total study area was 85 families, 224 genera, 287 species, 42 varieties, 4 form, or total 333 taxa. Among them, hydrophytes, hygrophytes, and others were 38, 108, and 187 taxa, respectively. The life form of the vascular hydrophytes was classified as 20 taxa of emergent plants, 6 taxa of floating-leaved plants, 5 taxa of free-floating plants, and 7 taxa of submersed plants, respectively. There were 27 plant communities including pure population, mixed population, and etc. It is also found that Trapa japonica-Ceratophyllum demersum community occupies 60.64 ha, the largest area, and Salvinia natans-Ceratophyllum demersum community 32.91 ha, Zizania latifolia community 30.05 ha, and that the area of free-floating plants was the largest as 172.6 ha(47.9%) on the basis of life form. Total annual primary production of the vascular hydrophytes and hygrophytes was 1,383.3ton. That of the emergent hydrophytes was the most as 564.1 ton(40.8%), and those of the free-floating, floating-leaved, and the submersed were 484.1 ton(34.9%), 146.7 ton(10.6%), and 1.3 ton(0.5%), respectively, and the hygrophytes was 182.1 ton(13.2%). Since most plant species are fairly adapted to the present marsh environment, bad influences and change of species composition are expected by the artificial influences on the wetland such as fragmentation, reclamation, and introduction of the exotic species. Therefore, schemes and counterplans for the conservation and preservation of the marsh are demanded.