• Title/Summary/Keyword: species complex

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Study on forest vegetation in the vicinity of onsan industrial complex (溫山工團 周邊의 森林植生에 관한 調査)

  • Kim, Jong-Gab
    • The Korean Journal of Ecology
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    • v.15 no.3
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    • pp.231-246
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    • 1992
  • In order to estimate effects of air pollution for pinus thunbergii forests arounding onsan industrial complex, structure of forest vegrtation was surveyed. In the survey of forest vegetation, pinus densiflora have been died or being withered, and importance value(I.V) of rhododendron mucromulatum and lespedeza spp. were low at the vicinity of industrial complex. Especially lespedeza maximowiczii and l. maritima were not entirely appeared at the vicinity of industrial complex. I.V. of quercus serrata, robinia pseudoacacia and alnus firma were preferably high at the vicinity of industrial complex, and those of smilax china, rubus crataegifolius and rhus trichocarpa were similar at every site and it could be guessed that those had a tolerance. Number of species had a difference over 10 species at the vicinity of industrial complex as compared with those of remote sites, and species diversity showed highly at the farther sites of industrial complex, and also at the low layer, number of species, species diversity and evennes were low at the vicinity of industrialcomplex and species weakened to air pollution were disappearing. It was possible that forest vegetation would be changed from pinus spp. to community of a. firma and r. pseudoacacia.

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Development of PCR-RFLP Technique for Identify Several Members of Fusarium incarnatum-equiseti Species Complex and Fusarium fujikuroi Species Complex

  • Pramunadipta, Syafiqa;Widiastuti, Ani;Wibowo, Arif;Suga, Haruhisa;Priyatmojo, Achmadi
    • The Plant Pathology Journal
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    • v.38 no.3
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    • pp.254-260
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    • 2022
  • Fusarium incarnatum-equiseti species complex (FIESC) contain over 40 members. The primer pair Smibo1FM/Semi1RM on the RPB2 partial gene has been reported to be able to identify Fusarium semitectum. The F. fujikuroi species complex (FFSC) contains more than 50 members. The F. verticillioides as a member of this complex can be identified by using VER1/VER2 primer pair on the CaM partial gene. In this research, the Smibo1FM/Semi1RM can amplify F. sulawesiense, F. hainanense, F. bubalinum, and F. tanahbumbuense, members of FIESC at 424 bp. The VER1/VER2 can amplify F. verticillioides, F. andiyazi, and F. pseudocircinatum, members of FFSC at 578 bp. Polymerase chain reaction-restriction fragment length polymorphism by using the combination of three restriction enzymes EcoRV, MspI, and HpyAV can differentiate each species of FIESC used. The two restriction enzymes HpaII and NspI can distinguish each species of FFSC used. The proper identification process is required for pathogen control in the field in order to reduce crop yield loss.

Comparison of Virulence between Five Strains of Cryptococcus Species Complex in a Rat Model

  • Park, Gyu-Nam;Kim, Sun-Young;Kim, Hye-Ran;Jung, Bo-Kyung;An, Dong-Jun;Hong, Seung-Bok;Chang, Kyung-Soo
    • Biomedical Science Letters
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    • v.24 no.3
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    • pp.183-195
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    • 2018
  • Cryptococcosis, which is caused by the Cryptococcus species complex (including Cryptococcus neoformans and Cryptococcus gattii), is well known as one of the most important medical problems. However, the of the Cryptococcus species complex is still limited to pneumonia and meningitis. In particular, the differences in virulence among the five major serotypes of the Cryptococcus species complex are not fully understood. To elucidate the virulence of the Cryptococcus species complex when it is disseminated hematogenously, rats were infected by different strains of the Cryptococcus species serotype, and their histopathological characteristics were compared after infection. The cumulative mortality ratio of rats infected with serotype B strain was slightly higher than in the other experimental groups. In addition, the average recovery of the Cryptococcus species complex from rats infected with serotype B strain was significantly higher than in the other groups in almost all organ samples except spleen. The recovery of the Cryptococcus species complex was associated with the severity of histopathological lesions, including bleeding, inflammation, and tissue damage in all organs. In rats infected with serotype B strain, the virulence was the most severe, especially in the lungs and liver. These results indicate that the pathophysiology of the Cryptococcus species complex infection differs according to serotype.

Analysis on Accuracy and Indigenity of Landscape Plants Species in Planting Design and Construction (식재설계 및 시공시 조경수종 사용에 있어서의 정확성과 자생성 분석)

    • Journal of the Korean Institute of Landscape Architecture
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    • v.26 no.2
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    • pp.251-258
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    • 1998
  • The purposes of this study was to investigate accuracy and indigenity of landscape plant species in planting design and construction at housing complex and offer basic data for improving precision of planting construction. The scientific name of landscape plant species was described in planting drawings at only two sites among twelve survey sites. According to analysis on indigenity of plant species in planting drawings, it was found that the component ratio of foreign species was the highest and the component ratio of native species at public housing complex was the lowest. The component ratio of landscape plant species in planting construction was severely differed to that of planting drawings. Also the component ratio of cultivar was higher than that of planting drawings due to planting of sevveral cultivars for one species in planting drawings. In the result of accuracy analysis on landscape plant species in planting construction, it was found that mean ratio of inacccurate species was 33.2% at public housing complex, 29.6% at local company housing complex and 26.4% at nationwide company housing complex. It was found that several cultivars were planted for one species in planting drawings. The representative species which were planted by several cultivars were Camellia japonica, Rododendron spp., Prunus spp. and Magnolia spp. and so on. In order to promote the precision and speciality of planting design and construction, scientific and cultivar name of plants should be described in planting drawings.

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Exotic Plant Species around Jeongeup Research Complex and RFT Industrial Complex (정읍 신정동 연구단지 및 RFT산업단지 주변 외래식물 현황)

  • Kim, Jin Kyu;Cha, Minkyoung;Ryu, Tae Ho;Lee, Yun-Jong;Kim, Jin-Hong
    • Journal of Radiation Industry
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    • v.9 no.3
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    • pp.119-126
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    • 2015
  • In Shinjeong-dong of Jeongeup, there are three government-supported research institutes and an RFT industrial complex which is currently being established. Increased human activities can affect flora and fauna as a man-made pressure onto the region. As a baseline study, status of exotic plants was investigated prior to a full operation of the RFT industrial complex. A total of 54 species and 1 variety of naturalized or introduced plants were found in the study area. Among them, three species (Ambrosia artemisifolia var. elatior, Rumex acetocella and Aster pilosus) belong to 'nuisance species', and four species(Phytolacca americana, Iopomoea hederacea, Ereechtites hieracifolia and Rudbeckia laciniata) to 'monitor species' designated by the ministry of Environment. Some of naturalized trees and plants were intentionally introduced in this area, while others naturally immigrated. Physalis angulata seemes to immigrate in the study area in the form of mixture with animal feeds as its distribution coincided with the transportation route of the animal feeds. Liquidambar styraciflua is amenable to the ecological investigation on the possible expansion of the species to the nearby Naejang National Park as its leave shape and autumn color are very similar to those of maple trees. The number of naturalized plants around the RFT industrial complex will increase with an increase in floating population, in human activities in association with constructions of factories and operations of the complex. The result of this study provides baseline data for assessing the ecological change of the region according to the operation of the RFT industrial complex.

Reassessment of the Taxonomic Status of the Bemisia tabaci Complex (Hemiptera: Aleyrodidae) Based on Mitochondrial COI Gene Sequences (미토콘드리아 COI 유전자 분석을 통한 담배가루이 종복합군의 분류학적 재평가)

  • Lee, Wonhoon;Lee, Gwan-Seok
    • Korean journal of applied entomology
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    • v.56 no.2
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    • pp.107-120
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    • 2017
  • Bemisia tabaci (Hemiptera: Aleyrodidae) is one of the most important insect pests in the world. In the present study, the taxonomic status of B. tabaci and the number of species composing the B. tabaci complex were determined based on 550 COI gene sequences of B. tabaci. Genetic divergence within B. tabaci ranged from 0% to 27.8% (average 11.1%). This result indicates that the B. tabaci complex is composed of multiple species that may belong to different genera or subfamilies. A phylogenetic tree constructed based on 217 COI gene sequences without duplications revealed that the B. tabaci complex is composed of a total of 43 putative species, including a new species, Java. In addition, genetic divergence within nine species (Australia, Asia II 1, Asia II 6, Asia II 7, Asia II 10, Mediterranean, New world, New world 2, Sub Saharan Africa 1) indicates that 4.0% is reasonable to be used as a threshold of species boundaries within the B. tabaci complex, and species with high intraspecific genetic divergences can be related with cryptic species.

Crossability of the Aconitum jaluense Species Complex (Ranunculaceae) in Korea

  • Oh, Sang-Hun;Park, Chong-Wook
    • Animal cells and systems
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    • v.2 no.4
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    • pp.435-438
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    • 1998
  • In the present study, we have examined the crossability of four species in the A. jaluense complex to provide additional information on their delimitation and levels of differentiation. Crosses between diploid A. chiisanense and the tetraploid species including A. jaluense s. str., A. triphyllum, and A. pseudoproliferum yielded no fruit- or seed-set, indicating that the former species is reproductively completely isolated from the latter three species. In interspecific crosses between the tetraploid species, combinations involving A. jaluense s. str. resulted in much reduced fruit- and seed-set, indicating that A. jaluense s. str. is more or less reproductively isolated from the other tetraploid species. However, crossing data revealed the absence of reproductive isolation between A. triphyllum and A. pseudoproliferum These results strongly support the relationships that have been previously suggested for the A. jaluense complex on the basis of morphology, chromosome number, and flavonoid chemistry.

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Identification and Characterization of Colletotrichum Species Associated with Bitter Rot Disease of Apple in South Korea

  • Oo, May Moe;Yoon, Ha-Yeon;Jang, Hyun A;Oh, Sang-Keun
    • The Plant Pathology Journal
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    • v.34 no.6
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    • pp.480-489
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    • 2018
  • Bitter rot caused by Colletotrichum species is a common fruit rotting disease of apple and one of the economically important disease in worldwide. In 2015 and 2016, distinct symptoms of bitter rot disease were observed in apple orchards in five regions of South Korea. In the present study, infected apples from these regions were utilized to obtain eighteen isolates of Colletotrichum spp. These isolates were identified and characterized according to their morphological characteristics and nucleotide sequence data of internal transcribed spacer regions and glyceraldehyde-3-phosphate-dehydrogenase. Molecular analyses suggested that the isolates of Colletotrichum causing the bitter rot disease in South Korea belong to 4 species: C. siamense; C. fructicola; C. fioriniae and C. nymphaeae. C. siamense and C. fructicola belonged to Musae Clade of C. gloeosporioides complex species while C. fioriniae and C. nymphaeae belonged to the Clade 3 and Clade 2 of C. acutatum complex species, respectively. Additionally, we also found that the isolates of C. gloeosporioides species-complex were more aggressive than those in the C. acutatum species complex via pathogenicity tests. Taken together, our results suggest that accurate identification of Colletotrichum spp. within each species complex is required for management of bitter rot disease on apple fruit in South Korea.

Comparative chloroplast genomics and phylogenetic analysis of the Viburnum dilatatum complex (Adoxaceae) in Korea

  • PARK, Jongsun;XI, Hong;OH, Sang-Hun
    • Korean Journal of Plant Taxonomy
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    • v.50 no.1
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    • pp.8-16
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    • 2020
  • Complete chloroplast genome sequences provide detailed information about any structural changes of the genome, instances of phylogenetic reconstruction, and molecular markers for fine-scale analyses. Recent developments of next-generation sequencing (NGS) tools have led to the rapid accumulation of genomic data, especially data pertaining to chloroplasts. Short reads deposited in public databases such as the Sequence Read Archive of the NCBI are open resources, and the corresponding chloroplast genomes are yet to be completed. The V. dilatatum complex in Korea consists of four morphologically similar species: V. dilatatum, V. erosum, V. japonicum, and V. wrightii. Previous molecular phylogenetic analyses based on several DNA regions did not resolve the relationship at the species level. In order to examine the level of variation of the chloroplast genome in the V. dilatatum complex, raw reads of V. dilatatum deposited in the NCBI database were used to reconstruct the whole chloroplast genome, with these results compared to the genomes of V. erosum, V. japonicum, and three other species in Viburnum. These comparative genomics results found no significant structural changes in Viburnum. The degree of interspecific variation among the species in the V. dilatatum complex is very low, suggesting that the species of the complex may have been differentiated recently. The species of the V. dilatatum complex share large unique deletions, providing evidence of close relationships among the species. A phylogenetic analysis of the entire genome of the Viburnum showed that V. dilatatum is a sister to one of two accessions of V. erosum, making V. erosum paraphyletic. Given that the overall degree of variation among the species in the V. dilatatum complex is low, the chloroplast genome may not provide a phylogenetic signal pertaining to relationships among the species.

Taxonomic revision of the Liparis makinoana complex (Orchidaceae; Epidendroideae; Malaxidae) in Korea

  • Jungsim LEE;Dong Chan SON
    • Korean Journal of Plant Taxonomy
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    • v.53 no.2
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    • pp.110-125
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    • 2023
  • On the Korean Peninsula, eleven species of the genus Liparis (Orchidaceae) have been recorded, and three species are presumed to belong to the L. makinoana complex. These are L. koreana, L. japonica, and L. makinoana. Liparis japonica and L. makinoana are distributed in South Korea, but the distribution of L. koreana has not been confirmed. Liparis japonica and L. makinoana are morphologically very similar, making it difficult to classify them. Recently, L. japonica and L. makinoana in Japan were reclassified into three species. One of them is an amended species of L. makinoana, and the other two species were described as new species, specifically L. longiracemosa and L. suzumushi. It was confirmed that the three species are distributed in South Korea. Here, we provide a distribution map, photographs of the three new species, and a comparison of their morphological characteristics.