• Title/Summary/Keyword: soybean soil

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Production of Rapamycin in Streptomyces hygroscopicus from Glycerol-Based Media Optimized by Systemic Methodology

  • Kim, Yong Hyun;Park, Bu Soo;Bhatia, Shashi Kant;Seo, Hyung-Min;Jeon, Jong-Min;Kim, Hyun-Joong;Yi, Da-Hye;Lee, Ju-Hee;Choi, Kwon-Young;Park, Hyung-Yeon;Kim, Yun-Gon;Yang, Yung-Hun
    • Journal of Microbiology and Biotechnology
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    • v.24 no.10
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    • pp.1319-1326
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    • 2014
  • Rapamycin, produced by the soil bacterium Streptomyces hygroscopicus, has the ability to suppress the immune system and is used as an antifungal, anti-inflammatory, antitumor, and immunosuppressive agent. In an attempt to increase the productivity of rapamycin, mutagenesis of wild-type Streptomyces hygroscopicus was performed using ultraviolet radiation, and the medium composition was optimized using glycerol (which is one of the cheapest starting substrates) by applying Plackett-Burman design and response surface methodology. Plackett-Burman design was used to analyze 14 medium constituents: M100 (maltodextrin), glycerol, soybean meal, soytone, yeast extract, $(NH_4)_2SO_4$, $\small{L}$-lysine, $KH_2PO_4$, $K_2HPO_4$, NaCl, $FeSO_4{cdot}7H_2O$, $CaCO_3$, 2-(N-morpholino) ethanesulfonic acid, and the initial pH level. Glycerol, soytone, yeast extract, and $CaCO_3$ were analyzed to evaluate their effect on rapamycin production. The individual and interaction effects of the four selected variables were determined by Box-Behnken design, suggesting $CaCO_3$, soytone, and yeast extract have negative effects, but glycerol was a positive factor to determine rapamycin productivity. Medium optimization using statistical design resulted in a 45% ($220.7{\pm}5.7mg/l$) increase in rapamycin production for the Streptomyces hygroscopicus mutant, compared with the unoptimized production medium ($151.9{\pm}22.6mg/l$), and nearly 588% compared with wild-type Streptomyces hygroscopicus ($37.5{\pm}2.8mg/l$). The change in pH showed that $CaCO_3$ is a critical and negative factor for rapamycin production.

Physio-ecological Characteristics and Control of Alopecurus aequalis Sobol. var. amurensis (Kom.) Ohwi. - 1. Gernmination and Emergence Under Several Environmental Conditions (뚝새풀(Alopecurus aequalis Sobol. var. amurensis (Kom.) Ohwi.)의 생리생태적(生理生態的) 특성(特性) 및 방제(防除) - 1. 발아(發芽) 및 출아(出芽) 특성(特性))

  • Im, I.B.;Lee, S.Y.;Huh, S.M.
    • Korean Journal of Weed Science
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    • v.14 no.4
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    • pp.239-244
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    • 1994
  • As a fundamental study to control Alopeuclus aequalis Sobol. var. amurensis(Kom.) Ohwi., on dominant weed in barley and dry seeded rice cultivation on paddy fields, several factors which would have closer relations to its germination and emergence, were examined. The results are as follows. The dormancy of seeds were broken at dry-heat treatment of $30^{\circ}C$. The germination rate of the seeds was high in order of 15>10>20> $5^{\circ}C$ and was very low at more than $25^{\circ}C$. The emergence of A. aequalis was influenced little for the light, but had a tendency to be good on the dark condition. The seeds dried on room temperature germinated few but them treated on $30^{\circ}C$ for 24 hours were germinated over 80%. The A. aequalis occured few in the saline soil of salt concentration of more than 0.25% and the germination rate of seeds was very low on the over 0.5% solution of NaCl. On the solution of pH 6.0~12.0, the germination was not effected for pH but was very few on pH 2.0. At the paddy-lowland which have cultivated the soybean for three years A. aequalis emerged a few.

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Characteristics of Bacteria-Originated Keratinase for Feather Waste Treatment (가금폐기물 처리를 위한 세균유래 케라틴 분해효소의 특성)

  • Go, Tae-Hun;Lee, Sang-Mee;Cho, Kwang-Sik;Lee, Ye-Ram;Park, Soo-Yun;Jang, Eun-Young;Jeong, Seong-Yun;Son, Hong-Joo
    • Journal of Environmental Science International
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    • v.23 no.6
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    • pp.1095-1100
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    • 2014
  • Keratin wastes are generated in excess of million tons per year worldwide and biodegradation of keratin by microorganisms possessing keratinase activity can be used as an alternative tool to prevent environmental pollution. For practical use of keratinase, its physicochemical properties should be investigated in detail. In this study, we investigated characteristics of keratinase produced by Xanthomonas sp. P5 which is isolated from rhizospheric soil of soybean. The level of keratinase produced by the strain P5 increased with time and reached its maximum (10.6 U/ml) at 3 days. The production of soluble protein had the same tendency as the production of keratinase. Optimal temperature and pH of keratinase were $40^{\circ}C-45^{\circ}C$ and pH 9, respectively. The enzyme showed broad temperature and pH stabilities. Thermostability profile showed that the enzyme retained 94.6%-100% of the original activity after 1 h treatment at $10^{\circ}C-40^{\circ}C$. After treatment for 1 h at pH 6-10, 89.2%-100% of the activity was remained. At pH 11, 71.6% of the original activity was retained after 1 h treatment. Although the strain P5 did not degrade human hair, it degraded duck feather and chicken feather. These results indicate that keratinase from Xanthomonas sp. P5 could be not only used to upgrade the nutritional value of feather hydrolysate but also useful in situ biodegradation of feather.

A Study on the Root-knot Nematodes (Meloidogyne spp.) Affecting Economic Crops in Korea (경제작물에 영향을 미치는 뿌리혹 선충에 관한 연구)

  • Choi Y. E.;Choo H. Y.
    • Korean journal of applied entomology
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    • v.17 no.2 s.35
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    • pp.89-98
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    • 1978
  • A study on the root-knot nematodes (Meloidogyne spp.) affecting economic crops in Korea was undertaken to know the distribution of the nemic fauna. Total 66 samples were taken from soil and root of 24 host plants at different localities in 4 provinces. Four Meloidogyne species such as Meloidogyne hapla, Meloidogyne arenaria, Meloidogyne incognita and Meloidogyne javanica were identified and some morphological characteristics were described. One of these, Meloidogyne javanica was reported newly in Korea from Horticultural Experimental Station, Suweon, Gyeong Gi on potato, Geomsadong, Daegu on chinese cabbage, Sangeogdong, Daegu, Gyeong Bug on violet and Choeumri, Namhae, Gyeong Nam on pumpkin. In Jae Ju province, Meloidogyne incognita was only found except the other three species. The most common and widely distributed Meloidogyne species in Korea is Meloidogyne hapla by $50\%$ in total, next Meloidogyne incognita $33.3\%$ Meloidogyne arenaria $10.6\%$ Meloidogyne javanica $6.0\%$ in turn, The root-knot nematodes infected the most severely in Jae Ju province and Gyeong Nam, Gyeong Bug and Gyeong Gi province in turn. Twenty four plants were attacked by root-knot nematodes among them important economic crops are soybean, peanut, potato, tomato, cucumber, carrot, pumpkin, wateremelon, edible burdock, pepper, eggplant, cabbage, lettuce and tobacco in Korea.

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Studies on Varietal Differences in Growth, Nodulation and Nitrogen Fixation in Soybeans, Glycine max (L.) Merrill I. Changes in nitrogen fixation activity and dry weight of plant organs during reproductive stage (콩의 생육, 근류형성, 질소고정에 있어서 품종간 차이 I. 등숙단계별 각 기관 건물중 및 질소고정활성의 경시적 변화)

  • Eun-Hui Hong
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.32 no.3
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    • pp.323-329
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    • 1987
  • Five soybean varieties of two early maturing Karikei73 and SS 79168, and three late maturing Tohoku76, Baegunkong and Jangbaegkong were used and evaluated in the study. Of the varieties examined, Karikei73 was characterized by the delayed leaf senescence. The varieties were planted in the pots of 1/3500 a filled with volcanic ash soil at the experimental fields of the National Institute of Agrobiological Resources in Japan. Major agronomic characteristics including the activity of nitrogen fixation for root nodules during the grain filling period were measured. Measurements during the stages were followed by the stage of development descriptions for soybeans made by Fehr and Carviness (1977). The acetylene reducing activity (ARA) per dry weight of root nodule measured using acetylene reduction assays was the highest at R4-R4.5 with decreasing trends thereafter for the early matruing varieties, while it continuously increased up to R6 but decreased rapidly thereafter for the late maturing varieties. The dry weights of root nodules and all parts of the host plant at each stage checked were greater in the late maturing varieties being the same in ARA per pot.

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Development of Analytical Method for Fipronil Residues in Agricultural Commodities Using GC-ECD/MS (GC-ECD/MS를 이용한 농산물 중 Fipronil의 잔류 분석법 개발)

  • Ahn, Kyung-Geun;Kim, Gyeong-Ha;Kim, Gi-Ppeum;Hwang, Young-Sun;Kang, In-Kyu;Lee, Young Deuk;Choung, Myoung-Gun
    • Korean Journal of Environmental Agriculture
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    • v.34 no.4
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    • pp.309-317
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    • 2015
  • BACKGROUND: An analytical method was developed using GC-ECD/MS to precisely determine the residue of fipronil, a phenylpyrazole insecticide used to control a wide range of foliar and soil-borne pests.METHOD AND RESULTS: Fipronil residue was extracted with acetone from representative samples of five raw products which comprised hulled rice, soybean, Kimchi cabbage, green pepper, and apple. The extract was diluted with saline water, and fipronil was partitioned into n-hexane/dichloromethane (20/80, v/v) to remove polar co-extractives in the aqueous phase. Florisil column chromatography was additionally employed for final purification of the extract. Fipronil was separated and quantitated by GC-ECD using a DB-17 capillary column. Accuracy of the proposed method was validated by the recovery from crop samples fortified with fipronil at 3 levels per crop in each triplication.CONCLUSION: Mean recoveries ranged from 86.6% to 106.0% in five representative agricultural commodities. The coefficients of variation were less than 10%. Limit of quantitation of fipronil was 0.004 mg/kg as verified by the recovery experiment. A confirmatory technique using GC/MS with selected-ion monitoring was also provided to clearly identify the suspected residue. Therefore, this analytical method was reproducible and sensitive enough to determine the residue of fipronil in agricultural commodities.

Studies on the Production of Cellulase by Trichoderma sp. SO-571 and the Enzyme Treatment for Cellulosic Fabrics. (Trichoderma sp. SO-571에 의한 Cellulase 생산 및 섬유가공 처리에 관한 연구)

  • Oh, Sung-Hoon;Kim, Moo-Sung;So, Sung;Seo, Hyung-Ju
    • Microbiology and Biotechnology Letters
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    • v.31 no.1
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    • pp.42-45
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    • 2003
  • A Trichoderma sp. SO-571 producing cellulase was isolated from soil, and a pilot-scale cultivation and separation of cellulase were conducted. The cellulase activity was about 14.5 unit/ml after 112 hr of cultivation in a 301 fermenter containing 3.0% cellulose, 4.0% soybean powder, 3.0% wheat bran, 0.5% ($NH_4$)$_2$$SO_4$0.2% urea, 1.0% CSL, 0.5% $KH_2$PO$_4$, and 0.2% Tween 80. The cellulase was purified over 4.6 folds in three steps with 47.86% yield. The optimum pH of cellulase was pH 5.0 and optimum temperature was $60^{\circ}C$. To investigate the effect of the cellulase-treated cellulosic fabric, the weight loss was compared. The weight loss of denim treated with cellulase from Trichoderma sp.SO-571 was 2.9% and that with Celluclast 1.5L was 2.2%. In tencel treatement with enzyme, cellulase showed 0.7% higer weight loss than that with Celluclast 1.5L.

Production and properties of exoinulase from Streptomyces sp. S34 (Streptomyces sp. S34의 exoinulase 생산 및 성질)

  • Ha, Young-Ju;Kim, Su-Il
    • Applied Biological Chemistry
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    • v.35 no.5
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    • pp.375-381
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    • 1992
  • An exoinulase-producing bacterium was isolated from soil, and identified as Streptomyces sp. The maximum inulase production was achieved when inulin as carbon source and soybean meal as organic nitrogen source were included in the culture. The exoinulase was considered to be a constitutive enzyme produced not only by inulin but also by soluble starch or glucose. The purified enzyme on DEAE-cellulose and Sephadex G-200 column showed the maximal activity at $pH\;5.5{\sim}6.0$ and $50^{\circ}C$, but lost 65% inulase activity at $50^{\circ}C$ after 1 hour incubation. This exoinulase was activated by $Mn^{+2}$, wherease more that 80% inactivation was observed with $Ag^+$, $Hg^{+2}$ and $Fe^{+3}$. The enzyme was possibly a metalloenzyme in that EDTA and 8-hydroxyquinoline inhibited the enzyme. Km values for inulin (16.51 mM) and sucrose (14.62 mM) were in very close range suggesting mostly equal affinity toward the subatrates. However, the maximum velocity for inulin was 10 times greater than for sucrose.

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Occurrence characteristics and management plans of Lactuca scariola L., an ecosystem disturbance plant (생태계교란식물 가시상추의 발생특성과 관리방안)

  • In-Yong Lee;Seung-Hwan Kim;Yong-Ho Lee;Sun-Hee Hong
    • Korean Journal of Environmental Biology
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    • v.40 no.3
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    • pp.239-246
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    • 2022
  • Lactuca scariola L. is one of ecosystem-disturbance plants that grow everywhere such as roadsides, grasslands, railroads, banks, and fields. L. scariola usually occurs in autumn. It overwinters in rosette form. It flowers and produces seeds in early summer of the next year. Seeds of L. scariola can germinate immediately without dormancy when the temperature is over 20℃. Due to endogenous bacteria in seeds of L. scariola, it has a strong drought tolerance. Thus, it can grow well on roadsides. L. scariola should be controlled as it can result in 60-80% of soybean yield loss at densities above 50 plants m-2. It is advisable to remove L. scariola as it competes with native plants by acting as a pioneer to other ecosystem-disturbance plants. Among various control methods, chemical control is the most effective method that is widely used. Soil treatment with herbicides such as oxyfluorfen EC and pendimethalin EC can inhibit the development of L. scariola. Foliar treatment herbicides glyphosate and glufosinateammonium are widely used. L. scariola is resistant to 2,4-D, dicamba, and MCPA among foliar treatment herbicides. Thus, it is recommended to apply herbicides with different modes of action.

Estimating Carbon Fixation of 14 Crops in Korea (우리나라 주요 작물의 탄소 고정량 산출)

  • Kim, Gun-Yeob;Ko, Byong-Gu;Jeong, Hyun-Cheol;Roh, Kee-An;Shim, Kyo-Moon;Lee, Jeong-Taek;Lee, Deog-Bae;Hong, Suk-Young;Kwon, Soon-Ik
    • Korean Journal of Soil Science and Fertilizer
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    • v.42 no.6
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    • pp.460-466
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    • 2009
  • Carbon fixation and density of crops are important to estimate carbon uptake or emission by agricultural production activities and to establish life cycle inventory of crops for assessment of climate change impact. In this study, regional carbon fixation and density in each part of 14 crops, harvest index, and ratio of aboveground to underground were investigated to estimate biomass of 14 crops in Korea by using agricultural statistics data. Biomass yield of potato was $16.5ton\;ha^{-1}$, which was the highest, and those of rice, sweet potato, and garlic were $10.5ton\;ha^{-1}$, $8.7ton\;ha^{-1}$, and $7.5ton\;ha^{-1}$ respectively. Biomass yield of Green onion was the lowest as $2.8ton\;ha^{-1}$. Carbon density of 14 crops were in the order of potato ($6.4ton\;ha^{-1}$), rice ($4.2ton\;ha^{-1}$), sweet potato ($3.4ton\;ha^{-1}$), rape ($2.9ton\;ha^{-1}$) and garlic ($2.8ton\;ha^{-1}$). Regional distribution of carbon contents for each crop mapped revealed that carbon fixation of rice, soybean, sesame, garlic, and green onion were the highest in Jeonnam province, barley, red pepper, and watermelon in Gyeongnam, perilla in Chungnam, peanut in Gyeongbuk, rape and carrot in Jeju, sweet potato in Gyeonggi, potato in Gangwon. The results can be applied for assessing life cycle inventory of crops and crop productivity using remotely sensed data.