• Title/Summary/Keyword: soil quantity

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Complete Genomic Characterization of Two Beet Soil-Borne Virus Isolates from Turkey: Implications of Comparative Analysis of Genome Sequences

  • Moradi, Zohreh;Maghdoori, Hossein;Nazifi, Ehsan;Mehrvar, Mohsen
    • The Plant Pathology Journal
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    • v.37 no.2
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    • pp.152-161
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    • 2021
  • Sugar beet (Beta vulgaris L.) is known as a key product for agriculture in several countries across the world. Beet soil-borne virus (BSBV) triggers substantial economic damages to sugar beet by reducing the quantity of the yield and quality of the beet sugars. We conducted the present study to report the complete genome sequences of two BSBV isolates in Turkey for the first time. The genome organization was identical to those previously established BSBV isolates. The tripartite genome of BSBV-TR1 and -TR3 comprised a 5,835-nucleotide (nt) RNA1, a 3,454-nt RNA2, and a 3,005-nt RNA3 segment. According to sequence identity analyses, Turkish isolates were most closely related to the BSBV isolate reported from Iran (97.83-98.77% nt identity). The BSBV isolates worldwide (n = 9) were phylogenetically classified into five (RNA-coat protein read through gene [CPRT], TGB1, and TGB2 segments), four (RNA-rep), or three (TGB3) lineages. In genetic analysis, the TGB3 revealed more genetic variability (Pi = 0.034) compared with other regions. Population selection analysis revealed that most of the codons were generally under negative selection or neutral evolution in the BSBV isolates studied. However, positive selection was detected at codon 135 in the TGB1, which could be an adaptation in order to facilitate the movement and overcome the host plant resistance genes. We expect that the information on genome properties and genetic variability of BSBV, particularly in TGB3, TGB1, and CPRT genes, assist in developing effective control measures in order to prevent severe losses and make amendments in management strategies.

Estimation Model for Simplification and Validation of Soil Water Characteristics Curve on Volcanic Ash Soil in Subtropical Area in Korea (난지권 화산회토양의 토색별 토양수분 특성곡선 및 단일화 추정모형)

  • Hur, Seung-Oh;Moon, Kyung-Hwan;Jung, Kang-Ho;Ha, Sang-Keun;Song, Kwan-Cheol;Lim, Han-Cheol;Kim, Geong-Gyu
    • Korean Journal of Soil Science and Fertilizer
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    • v.39 no.6
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    • pp.329-333
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    • 2006
  • Most of volcanic ash soils in South Korea are distributed in Jeju province which is an island placed on southern part of Korea and has steep slope mountain area. There are many soils containing high contents of organic matter (OM) derived from volcanic ash in Jejudo, also. Therefore, irrigation and drainage in volcanic ash soil different with general soil which has low OM content have to be applied with another management way, but studies searching appropriate methods for them are set on insufficient situation because the area of volcanic ash soil in South Korea is only 1.3% (130,000ha). This study was conducted for analysis of soil water content and irrigation quantity appropriate for crops cultivated in volcanic ash soil with high OM content. Although soils with different soil color have the same soil texture, soil water characteristics curve by soil color showed the difference of water retention capability by OM content. But, this characteristics classified with soil color could be unified by scaling technique with similitude analysis method which get dimensionless water content using a present water content, a residual water content and saturated water content (or water content at 10kPa). A relation of gravimetric soil water content (GSWC) and dimensionless water content by the results showed a form of power function. The dimensionless water content (DWC) express a relative saturation degree of present water content. This was also expressed by van Genuchten model which describe the relation between relative saturation degrees and matric potentials. These results on soil water characteristics curve (SWCC) of volcanic ash soil will be the basic of irrigation plan in area having high organic contents into soil.

Analyzed Change of Soil Characteristics by Rainfall and Vegetation (강우 및 식생에 의한 토질특성 변화 분석)

  • Lee, Moon-Se;Kim, Kyeong-Su;Song, Young-Suk;Ryu, Je-Cheon
    • The Journal of Engineering Geology
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    • v.19 no.1
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    • pp.33-41
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    • 2009
  • In this study, some changes of soil characteristics in a field were analyzed to investigate the effect of heavy rainfall during rainy season. The heavy rainfalls were often induced geohazards like landslides. To do this, the reaching rainfall in the ground surface was investigated according to a condition of vegetation, and the change of soil characteristics induced by infiltrating rainfall was analyzed. The study site is a natural terrain located in Daedeok Science Complex. This site has same geology and soil condition whereas it has different vegetable condition. The rainfall records during the rainy season of 2006 and 2007 were selected. The rainfall records are based on the measuring date from Daejeon Regional Meteorological Administration adjacent to the study site. Also, the rainfall records according to the condition of vegetation were measured using rainfall measuring device made by ourselves. The soil tests were carried out about soil specimen sampled before and after rainfall, and then the change of soil characteristics related to rainfall and vegetation were analyzed. As the result, the density of vegetation was influenced by reaching rainfall quantity in the ground surface, and its influence intensity was decreased with rainfall intensity and rainfall duration. Also, it shows that degree of saturations, water contents, liquidities and shear resistances are directly influenced by heavy rainfalls.

Recommendation of NPK Fertilizers for Chinese Cabbage and Spinach Based on Soil Testing (토양검정(土壤檢定)에 따른 배추와 시금치의 NPK 시비추천(施肥推薦))

  • Song, Yo-Sung;Lee, Choon-Soo;Kwak, Han-Kang;Park, Young-Dae
    • Korean Journal of Soil Science and Fertilizer
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    • v.26 no.1
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    • pp.25-30
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    • 1993
  • It is common that in the vegetable cultivation areas, the farmers tend to continue the heavy fertilization to maximize the crop yields in short term. This results in the accumulation of fertilizer elements in the soil and increase in the electrical conductivity of soil. Disregarding these, farmers continue to apply heavy doses of fertilizers. A field experiment was conducted to find out on such a soil whether fertilizer application taking the quantity of nutrients accumulated in the soil into account would save the fertilizer without losing the yield of crop, using Chinese cabbage and spinach as test crops. The findings of the experiment is summarized as following. 1. The yield of Chinese cabbage was not affected by reduction of $19kg\;P_2O_5/10a$ and $7kg\;K_2O/10a$ as compared to farmers doses, and in case of spinach the yield rather was increased under the reduction of $22kg\;P_2O_5/10a$ and $22kg\;K_2O/10a$. 2. The reduction of fertilizers according to plant nutrient status of soils did not affect the inorganic nutrient contents of the crops significantly, in both Chinese cabbage and spinach. 3. A trend was observed that the reduction in the P and K fertilizers application would shorten the storage period of Chinese cabbage. 4. The reduction in P and K fertilizers application resulted in the reduction in available P, exchangeable K, EC and $NO_3-N$ in the soil after the harvest of the crops.

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Distribution of Arbuscular Mycorrhizal Fungi(AMF) at Ginseng Cultivated Fields in Jeonnam Province (전남지역 인삼재배 토양의 Arbuscular 균근균 분포 특성)

  • Sohn, Bo-Kyoon;Jin, Seo-Young;Lee, Do-Jin
    • Korean Journal of Soil Science and Fertilizer
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    • v.41 no.3
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    • pp.214-222
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    • 2008
  • This study was carried out to investigate the distribution characteristics, colonization patterns of arbuscular mycorrhizal fungi (AMF) at Ginseng- cultivated fields in Jeonnam province including Gokseong, Yeonggwang, Yeongam and Haenam area. Average density of AMF spores in all of analyzed areas was in the range of $3.4{\sim}5.9spores\;g^{-1}$ air-dried soil and spore density in the soil was increased gradually up to Ginseng cultivated fields grown for 3 years. However, AMF spore densities in the marginal field soil were $6.3{\sim}14.7spores\;g^{-1}$ air-dried soil and it was higher than those in Ginseng-cultivated field soils. A $45{\sim}106{\mu}m$ in diameter of AMF spores by size was dominant (74.3%) in Ginseng cultivated fields. AMF colonization association type in Ginseng roots was a Paris-type. Average rates of AMF infection ranged from 40% to 50%, while 64.4% of AMF infection occurred in Yeongam area. External hyphae length (EHL) in the rhizosphere soil of Ginseng cultivated field was in the range of $0.5{\sim}4.4m\;g^{-1}$ air-dried soil and the hyphae quantity was gradually increased proportional to increment of Ginseng cultivation years.

The Effects of Irrigation levels on the Yield and the Consumptive Use of Red Pepper (관개수준이 고추의 수확량 및 소비수량에 미치는 영향)

  • 윤학기;정상옥;서승덕
    • Magazine of the Korean Society of Agricultural Engineers
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    • v.31 no.2
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    • pp.82-91
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    • 1989
  • This study was carried out to get the basic information of irrigation plans for the red pepper, such as optimum irrigation level and irrigation requirement in Taegu and Kyungpook province. In this study, red peppers were cultivated in 6 PVC pot lysimeters filled with 60cm deep clay loam soil. Four tensiometers were installed in each plot to measure the soil water pressure head. Field measurements were made during the period June 6 to October 31, 1988 at the experimental farm of Kvungpook National University. Six levels of irrigation were used. They were PF 1.8-2.0, PF 2.2-2.4, PF 2.8-3.0, FC-PF.1.7, FC-PF 2.2, and FC-PF 2.7. The results obtained from this study are summarized as follows : 1. In case of irrigation levels of narrow ranges of water contents, the higher the soil water content was, the larger the ET was. Hut in case of the irrigation levels returning to the field capacity, the lager the PF value of irrigation point was, the larger the ET was. Considering ET, yield and weight per fruit, the latter is much better than the former irrigation method. 2. The mean daily ET and mean ET ratio for each 10-day period showed that the maximum value occured in the last of August. The ranges of those were 3.74-14.64 mm/day and 0.87-3.40, respectively. These values showed that small during the early stage of growth, large during the middle stage and getting smaller in the last stage. 3. In case of irrigation levels of narrow ranges of water contents, the increase of irrigation water supplied increased the ET. The relationship between the two showed nearly straight line. Most of irrigated water was consumed as ET and the rest as percolation. But, in case of irrigation levels returning to the field capacity, the higher the PF value of irrigation point was, the larger the ET ratio was. However, their relationship didn't show straight line. 4. The irrigation level of PC - PP 2.7 was found to be the optimum irrigation level with respect to the yield, the weight per fruit, stem length, irrigation requirement and percolation quantity. In this case, mean daily ET and mean ET ratio were 6.79 mm/day (total 10052 mm) and 1.67, respectively. The maximum mean daily ET and mean ET ratio for 10-day period were 14.64 mm/day and 3.40, respectively, in the last of August, and the maximum daily ET was 2126 mm/day on August 24. 5. In case of PC - PP 2.7 which is found the optimum irrigation level, mean irrigation water required, mean ET and mean percolation water quantity were 7.44 mm/day, 6.79 mm/day(91.3% of irrigation water), and 0.38 mm/day (5.5% of it), respectively.

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Determination of Aquifer Parameters by the Improved Slope-Matching Method (개선된 SM(Slope-Matching) 방법에 의한 대수층의 특성변수 결정)

  • 김민환;오종민;전일권
    • Journal of Soil and Groundwater Environment
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    • v.6 no.4
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    • pp.73-81
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    • 2001
  • With the development of industry and standard of living, the quantity of groundwater consumption has been increasing. For the analysis of groundwater, to determine the hydraulic parameters of aquifer is very important. Various numerical methods have been developed to solve aquifer tests and eliminate the subjectivity of traditional graphical type curve methods. The slope-matching method, which matches the slope of the Theis type curve to the slope of the field data, can be used to numerically solve pump tests for both leaky and nonleaky aquifers. A FORTRAN program on based slope-matching method was developed to obtain the transmissivity, storage coefficient, and leaky factor from pumping test data automatically. Results derived from published data show that the improved slope-matching method gives parameters close to the ones derived by the slope-matching method.

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Partitioning Interwell Tracer Test for NAPL Source Characterization: A General Overview

  • Lee, Tony R.;A. Lynn Wood;Jeong, Seung-Woo
    • Proceedings of the Korean Society of Soil and Groundwater Environment Conference
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    • 2002.04a
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    • pp.159-162
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    • 2002
  • Innovative and nondestructive characterization techniques have been developed to locate and quantify nonaqueous phase liquids (NAPLs) in the vadose and saturated zones in the subsurface environment. One such technique is the partitioning interwell tracer test (PITT). The PITT is a simultaneous displacement of partitioning and non-partitioning tracers through a subsurface formation. Partitioning tracers will partition into the NAPL during their transport through NAPL-contaminated formations. Mean travel times of partitioning and non-partitioning tracers are used to estimate the quantity of NAPL encountered by the displaced tracer pulse. Travel times are directly proportional to the partitioning coefficient and the volume of NAPL contacted in the subsurface environment. This paper discusses the conceptual background, design and implementation of PITTs. (This document has not been subjected to Agency review and therefore does not necessarily reflect the views of the Agency, and no official endorsement should be inferred.)

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Agricultural Status and Soils in Korea

  • Ha, Sang-Keun;Chung, Doug-Young
    • Korean Journal of Soil Science and Fertilizer
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    • v.45 no.1
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    • pp.118-126
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    • 2012
  • Korea's agriculture had many inherent problems. Korea is a mountainous country with only 22 percent farmland and less rainfall than most other neighboring rice-growing countries. A major land reform in the late 1940s and early 1950s spread ownership of land to the rural peasantry. Individual holdings, however, were too small or too spread out to provide families with much chance to produce a significant quantity of food. The enormous growth of urban areas led to a rapid decrease of available farmland, while at the same time population increases and bigger incomes meant that the demand for food greatly outstripped supply. The result of these developments was that by the late 1980s roughly half of Korea's needs, mainly wheat and animal feed corn, was imported. Korea's agriculture is facing a new round of difficulties from the inevitable process of market opening. Therefore, we have reviewed the agricultural status and soils in Korea how we can meet the coming issues with respect to production and prospect based on the government documents and articles published on the journals.

Effects of Rapid Temperature Change on Growth Response and Yield of Garlic in Greenhouse with Thermostat Control System in Jeonnam Province

  • Lee, Kyung Dong
    • Korean Journal of Soil Science and Fertilizer
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    • v.47 no.6
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    • pp.571-578
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    • 2014
  • The garlic cultivation area is moved by change of grown environment due to global warming. It is important to predict changes in cultivation area, quantity and quality of each crop. This study was carried out to estimate the yield and response of garlic growth by the rapid temperature changes in the greenhouse with thermostat control system. Seedlings of Namdo garlic were planted on September 27, 2012 and harvested on May 30, 2013. The used treatments for a rapid temperature change in March-April-May were T0 (control): $6.0-10.4-17.2^{\circ}C$, T1: $6.0-5.4(-5)-17.2^{\circ}C$, T2: $6.0-10.4-22.2(+5)^{\circ}C$ and T3: $6.0-5.4(-5)-22.2(+5)^{\circ}C$. Total dried weight per plant of garlic significantly increased by 5.0% for T2, but T1 and T3 decreased by 12.5 and 4.6%, respectively, compared to T0. Total yields of bulb within the temperature change as T2 and T0 increased significantly (p<0.05), as compared to T1. Decreasing temperature significantly (p<0.05) reduced plant height, SPAD reading, crude protein and fiber contents etc., as compared to T0 and T2. ABA contents gradually increased with time but IAA content rapidly decreased. Conclusively, growth and yield of garlic were more affected by decreased temperature than increased temperature at bulb development stage.