• Title/Summary/Keyword: soil bacteria

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벤젠과 톨루엔 분해에 적합한 미소환경과 토착미생물군의 분포변화 (Microbial Community in Various Conditions of Soil Microcosm)

  • 이한웅;이상현;이정옥;김현국;이수연;방성호;백두성;김동주;박용근
    • 미생물학회지
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    • 제37권1호
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    • pp.85-91
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    • 2001
  • 생물학적 방법으로 토착 미생물에 의해 벤젠과 톨루엔을 효과적으로 분해할 수 있는 토양환경인자의 조건을 조사하기 위해 16가지의 서로 다른 환경의 미소환경(microcosm)을 제작하여 벤젠과 톨루엔 분해실험을 수행하였고, 아울러 분해과정에서 토착미생물의 분포변화를 조사하였다. 그 결과 실험 조건중 토양의 수분 포화도는 30%와 60%이면서 동시에 생물들이 흡착할 수 있는 미생물 흡착제로 활성탄을 1% 첨가한 미소환경(Case 6, Case 7)에서 벤젠과 톨루엔의 분해속도가 가장 빨랐다. 토착토양미생물의 분포변화를 조사한 결과 벤젠과 톨루엔의 분해가 가장 빨리 일어나는 Case 6 와 Case 7에서는 10일 배양 후 total culturable bacteria는 초기 세균 수에 비해 각각 488배와 308배가 증가하였다. 벤젠과 톨루엔 분해세균의 증가 역시 총 세균수가 증가하는 비율로 증가하여 초기 분포를 계속 유지하였고, 벤젠과 톨루엔을 첨가한 미소환경에서 분해 미생물 종의 변화는, 첨가 전 그람음성 세균이 반응 10일 후에는 그람양성 세균이 탈이 분리되었다.

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농법과 계절에 따른 탈질세균의 군집 구조와 탈질율 비교 (A comparison of community structure and denitrifying ratio for denitrifying bacteria dependent on agricultural methods and seasons)

  • 윤준범;박경량
    • 미생물학회지
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    • 제53권1호
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    • pp.9-19
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    • 2017
  • 농법에 따른 토양성분과 $N_2O$ 발생량, 탈질세균 수, 탈질세균의 군집 구조와 T-RFLP 패턴을 계절별로 조사하였다. 토양성분 분석결과 총 탄소량과 총 유기탄소량은 유기농법에서 각각 1.57%, 1.28%, 무농약 농법은 1.52%, 1.24%, 관행농법은 1.40%, 0.95%로 친환경농법에서 유기 탄소량이 비교적 높게 나타났다. $N_2O$ 발생량은 5월과 11월 토양이 높았지만 속도는 8월 토양이 빨랐다. 탈질세균 수는 유기농토양은 평균 $1.32{\times}10^4MPN/g$,무농약 토양은 평균 $1.17{\times}10^4MPN/g$, 관행농 토양은 평균 $6.29{\times}10^3MPN/g$으로 친환경농법 토양이 관행농법 토양에 비해 탈질세균 수가 많은 것을 확인하였다. 계통수 분석 결과, 전체 10개 Cluster 중 유기농법 토양이 6개의 Cluster에 분포되어 친환경 농법 토양이 다양한 군집을 갖는 것을 확인하였다. T-RFLP 패턴의 PCA profile 분석 결과, 유기농법은 넓은 분포를, 관행농법은 좁은 범위의 분포를 나타내고, 무농약농법은 유기농법과 관행농법의 중간에 분포하는 것으로 확인되었다. 따라서 계절과 농법에 따라 탈질세균의 분포와 군집구조가 달라지는 것을 확인하였다.

토양 경작법을 이용한 유류오염토양 정화사업 타당성 연구 (Field Applicability Study of Landfarming for Petroleum Hydrocarbons Contaminated Soils)

  • 조은혜;류혜림;신도연;김영진;최용주;남경필
    • 한국지하수토양환경학회지:지하수토양환경
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    • 제18권2호
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    • pp.1-9
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    • 2013
  • The landfarming treatment for the remediation of the petroleum contaminated soil at the returned U.S. Military bases was investigated in this study. Specifically, the bioaugmentation performance using various commercially available petroleum-degrading bacteria was evaluated and the directions for enhancing the performance of the landfarming treatment were suggested. The environmental factors of the soils at the returned U.S. Military bases chosen for remediation indicate that the landfarming treatment can be used as the remediation technique; however, the addition of nitrogen or phosphorus is required. The lab-scale landfarming treatment tests using the model soil and the site soil showed that the degradation efficiency was greater with the model soil than the site soil and that the treatment performance was not affected by the number of bacteria present in the soil in the range of $10^6-10^{12}$ CFU/g. These results suggest that the successful landfarming treatment depends on the petroleum degradability of bacteria used and the environmental conditions during the treatment rather than the number of petroleum-degrading bacteria used.

염류(鹽類)의 스트레스가 주요(主要) 토양미생물(土壤微生物)의 변동(變動) 및 근권정착성(根圈定着性)에 미치는 영향(影響) (Effects of Salt-induced Stress on the Fluctuation and Rhizosphere Colonization of Soil Microorganisms)

  • 권장식;서장선;원항연
    • 한국토양비료학회지
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    • 제31권3호
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    • pp.291-300
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    • 1998
  • 본 시험은 염류의 종류와 처리함량에 따른 작물근권 생태계의 미생물상 변동과 근권정착성을 구명하고자 하였다. 토양처리 염류($KNO_3$, $K_2HPO_4$, KCl, $K_2SO_4$)의 염농도(EC)와 포자형성세균, 그람음성세균수는 부의 상관관계를 보였으며, $K_2HPO_4$, $K_2SO_4$보다 KCl, $KNO_3$ 처리구에서 균수가 급격히 감소하였다. 균형염 처리토양의 미생물 밀도는 탄소원 첨가의 경우 그람음성세균은 EC $0.5dS\;m^{-1}$, 포자형성균은 EC $2.1dS\;m^{-1}$, 사상균 및 Fusarium sp.은 EC $8.0dS\;m^{-1}$에서 최대의 균수를 보였다. 균형염 처리토양의 Bacteria/Fungi 율은 염농도가 높아질수록 현저히 감소하며 토양처리 10일 경과후 757~1571, 30일 경과 후 89~215로 현저하게 낮아졌다. 오이, 토마토 근권 미생물의 뿌리정착밀도는 토양의 염농도가 높아질수록 형광성 Pseudomonas sp.은 현저하게 감소하였으나 병원성 Fusarium sp.은 증가하였다.

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Investigation of Possible Gene Transfer to Soil Microorganisms for Environmental Risk Assessment of Genetically Modified Organisms

  • Kim, Young-Tae;Park, Byoung-Keun;Hwang, Eui-Il;Yim, Nam-Hui;Kim, Na-Rae;Kang, Tae-Hoon;Lee, Sang-Han;Kim, Sung-Uk
    • Journal of Microbiology and Biotechnology
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    • 제14권3호
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    • pp.498-502
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    • 2004
  • The current study was conducted to monitor the possibility of the gene transfer among soil bacteria, including the effect of drift due to rain and surface water, in relation to the release of genetically modified organisms into the environment. Four types of bacteria, each with a distinct antibiotic marker, kanamycin-resistant P. fluorescens, rifampicin-resistant P. putida, chloramphenicol-resistant B. subtilis, and spectinomycin-resistant B. subtilis, were plated using a small-scale soil-core device designed to track drifting microorganisms. After three weeks of culture in the device, no Pseudomonas colonies resistant to both kanamycin and rifampicin were found. Likewise, no Bacillus colonies resistant to both chloramphenicol and spectinomycin were found. The gene transfer from glyphosate-tolerant soybeans to soil bacteria, including Rhizobium spp. as a symbiotic bacteria, was examined by hybridization using the DNA extracted from soil taken from pots, in which glyphosate-tolerant soybeans had been growing for 6 months. The results showed that 35S, T-nos, and EPSPS were observed in the positive control, but not in the DNA extracted from the soilborne microorganisms. In addition, no transgenes, such as the 35S promoter, T-nos, and EPSPS introduced into the GMO soybeans were detected in soilborne bacteria, Rhizobium leguminosarum, thereby strongly rejecting the possibility of gene transfer from the GMO soybeans to the bacterium.

실내배양에서 생계분, 톱밥 및 왕겨 첨가가 토양미생물상에 미치는 효과 (Effects of Fowl Dropping, Saw Dust and Rice Hull on Soil Microflora in vitro)

  • 양창술;공혜숙
    • 한국토양비료학회지
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    • 제29권1호
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    • pp.53-59
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    • 1996
  • 토양중에서 서식하는 미생물(微生物) flora의 구성과 미생물의 활동을 조사하기 위하여 토양 및 유기물 자재를 달리 처리하여 $28{\pm}2^{\circ}C$에서 항온시키면서 84일에 걸쳐 경시적으로 각종 미생물(微生物)의 활성과 미생물상(微生物相)의 구성변화에 미치는 영향을 검토하여 다음과 같은 결과를 얻었다. 사상균 전세균, 그램음성세균 그리고 방선균의 활성도는 배양 21일째에, 그리고 포자형성세균은 배양 42일째에 가장 높은 수를 나타내었다. 사상균과 그램음성세균의 수는 계분+톱밥 처리구(F+S), 포자형성세균수와 방선균은 토양+계분+톱밥처리구(S+F+S), 그리고 전세균수는 토양+화학비료 처리구(S+C.F.)에서 가장 높았다. 그러나 계분+왕겨(F+R)만의 처리구에서는 사상균을 제외한 모든 토양미생물수가 매우 낮은 결과를 보였다. 토양세균군의 조성 비율중에서 순수분리과정동안 배양되지 않고 죽은 사균(死菌)은 토양+계분+왕겨 (S+F+R)처리구와 계분+왕겨(F+R)처리구에서 각각 70%, 40%로 다른 처리구보다 높은 비율을 차지하였다. 방선균은 토양+계분(S+F)처리구, 그리고 토양+계분+톱밥 (S+F+S)처리구에서 Streptomyces속(屬), Saccharomonospora속(屬), Nocardia속(屬), Micromonospora속(屬) 그리고 Actinomadura속(屬)으로 분리 동정되었다.

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FAME Analysis to Monitor Impact of Organic Matter on Soil Bacterial Populations

  • Kim, Jong-Shik;Joo, Jin-Bee;Weon, Hang-Yeon;Kang, Chang-Seong;Lee, Si-Kyung;Yahng, Chahng-Sool
    • Journal of Microbiology and Biotechnology
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    • 제12권3호
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    • pp.382-388
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    • 2002
  • In order to assess the effects of organic fertilizer on soil microbial community structure and diversity in the greenhouse fields, fatty acid methyl ester (FAME) was analyzed by the MIDI (Microbial ID, Inc., Newark, DE, U.S.A.) system and enumerations were performed. In relation to bacterial division of each sample, low GC Gram-positive bacteria were predominant among bacteria cultured on aerobic bacteria media. On the other hand, alpha subdivision was predominant on proteobacteria of control and OM (organic matter) 1 treated plot, and Flavobacterium spp. existed in OM2 plot on crystal violet media of all samples. Shannon-weaver Index (H) of OM1 plot varied most by 1.9 and 5.0 among bacteria cultured on aerobic bacteria media and crystal violet media, respectively. Our results revealed that addition of the organic wastes to soil led to a highly diverse microbial community, but the excessive amounts of organic and mineral fertilizer applied in the greenhouse fields produced excess nutrients in soil and led to simplification on bacterial populations.

EVALUATION OF MICROBIAL RISK IN SOIL AMENDED WITH ORGANIC FERTILIZERS FROM STABILIZED SWINE MANURE WASTE

  • Han, Il;Lee, Young-Shin;Park, Joon-Hong
    • Environmental Engineering Research
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    • 제12권4호
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    • pp.129-135
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    • 2007
  • This study evaluated microbial risk that could develop within soil microbial communities after amended with organic fertilizers from stabilized swine manure waste. For this purpose, we assessed the occurrences and competitiveness of antibiotic resistance and pathogenicity in soil microbial communities that were amended with swine manure wastes stabilized by a traditional lagoon fermentation process and an autothermal thermophilic aerobic digestion process, respectively. According to laboratory cultivation detection analysis, soil applications of the stabilized organic fertilizers resulted in increases in absolute abundances of antibiotic resistant bacteria and of two tested pathogenic bacteria indicators. The increase in occurrences might be due to the overall growth of microbial communities by the supplement of nutrients from the fertilizers. Meanwhile, the soil applications were found to reduce competitiveness for various types of antibiotic resistant bacteria in the soil microbial communities, as indicated by the decrease in relative abundances (of total viable heterotrophic bacteria). However, competitiveness of pathogens in response to the fertilization was pathogens-specific, since the relative abundance of Staphylococcus was decreased by the soil applications, while the relative abundance of Salmonella was increased. Further testes revealed that no MAR (multiple antibiotic resistance) occurrence was detected among cultivated pathogen colonies. These findings suggest that microbial risk in the soil amended with the fertilizers may not be critical to public health. However, because of the increased occurrences of antibiotic resistance and pathogenicity resulted from the overall microbial growth by the nutrient supply from the fertilizers, potential microbial risk could not be completely ruled out in the organic-fertilized soil samples.

길항미상물에 의한 White Clover ( Trifolium repens L. ) 생산성 향상에 관한 연구 (Studies on White Clover Yield Increase by Antagonistic Bacteria)

  • 최기춘;윤창;송채은
    • 한국초지조사료학회지
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    • 제18권3호
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    • pp.187-194
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    • 1998
  • This study was conducted to investigate the effect of antagonistic bacteria and pathogenic fungi on growth and yields of white clover(Trifo1iurn repens L.) in continuous cropping soil(CCS) and non-continuous cropping soil(NCCS). The gowth experiment of white clover was conducted at pots in a vinyl house. White clover was established by seeding into pots of 12 cm in diameter and 9 cm in depth containing 1:l mixture of soil and vermiculite with antagonistic bacteria and pathogenic fungi. In dark culture experiment, white clover lived longer in treatment of antagonistic bacteria than in treatment of control, but lived shorter in CCS than in NCCS. Dry weight of white clover was increased by the inoculation of the antagonistic bacteria(p< 0.05), but decreased by the inoculation of the pathogenic fungi(p< 0.05) both CCS and NCCS. In conclusion, bacterization of white clover with antagonistic bacteria enhances the growth and yield of white clover.

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Monitoring of Horizontal Gene Transfer from Agricultural Microorganisms to Soil Bacteria and Analysis of Microbial Community in Soils

  • Kim, Sung-Eun;Moon, Jae-Sun;Choi, Won-Sik;Lee, Sang-Han;Kim, Sung-Uk
    • Journal of Microbiology and Biotechnology
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    • 제22권4호
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    • pp.563-566
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    • 2012
  • To investigate the possibility of horizontal gene transfer between agricultural microorganisms and soil microorganisms in the environment, Bacillus subtilis KB producing iturin and the PGPR recombinant strain Pseudomonas fluorescens MX1 were used as model microorganisms. The soil samples of cucumber or tomato plants cultivated in pots and the greenhouse for a six month period were investigated by PCR, real-time PCR, Southern hybridization, and terminal restriction fragment length polymorphism (T-RFLP) fingerprinting. Our data from Southern blotting and T-RFLP patterns suggest that the model bacteria do not give significant impacts on the other bacteria in the pots and greenhouse during cultivation.