• Title/Summary/Keyword: similarity value

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Morphological characteristics and genetic diversity of Calanthe species native to Korea (한국 자생 새우난초의 형태적 특성 및 유전적 다양성)

  • Cho, Dong-Hoon;Choi, Young-Whan;Kang, Jum-Soon;Lee, Yong-Jae;Choi, In-Soo;Lee, Young-Geun;Jee, Sun-Ok;Kim, Kyung-Min;Son, Beung-Gu
    • Journal of Life Science
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    • v.17 no.3 s.83
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    • pp.312-317
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    • 2007
  • This study was conducted to research the morphological characteristics and analyze the genetic diversity by using RAPD in Calanthe species native to Korea. Nine samples were selected by flower color and 19 morphological characteristics. In the length and width of leaf, dorsal sepal, the lateral sepal, the petal, the central lip, and the lateral lip, C. discolor was the shortest and narrowest, respectively, but C. sieboldii was the longest and the widest, respectively. The flower stalk length was the shortest in C. discolor, and the longest in C. sieboldii. Three variants were the intermediate between C. discolor and C. sieboldii in the above morphological characteristics, but spur length was the longest in C. discolor, the shortest in C. sieboldii, and intermediate in the variants. The ovary length in C. discolor was shortest and C. sieboldii and variants were similar with each other. The flower color of C. discolor were brownish red, the value of CIE Lab was between 40 and 50. The flower color of C. sieboldii was yellowish, the value of CIE Lab was between 110 and 130. And variants had various colors between 50 to 70 in the value of CIE Lab. By analyzing multiple band patterns of PCR products, 154 bands were selected as polymorphic RAPD markers. The analysis of genetic similarity of Calanther species using RAPD showed that C. discolor and C. sieboldii are more distant from each other than variants, and these results demonstrated that genetic position of variants located between C. discolor and C. sieboldii.

Ecological Characteristic between the Re-introduction Population and the Original Population (Jojong Stream, Sudong Stream) of Zacco koreanus in the Bongseonsa Stream, Korea (봉선사천의 참갈겨니(Zacco koreanus) 재도입 개체군과 원개체군(조종천, 수동천) 간 생태학적 특징)

  • Wang, Ju-Hyoun;Choi, Jun-Kil;Lee, Hyuk-Je;Lee, Hwang-Goo
    • Korean Journal of Environment and Ecology
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    • v.31 no.6
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    • pp.537-548
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    • 2017
  • The purpose of this study was to investigate the species composition and the aquatic environment of Jojong Stream and Sudong Stream, which were the original habitats of Zacco koreanus population and restored population re-introduced in Bongseonsa Stream. It also compared and analyzed the states of the growth and reproductive ability of Z. koreanus habiting in each of the three streams. The investigation was conducted in June 2016 which was known as the spawning season of Z. koreanus. The results of the physical aquatic environments showed the slight differences in altitude, width and depth of water among three streams, but the bottom structure was found to be quite different in the composition of the boulder, cobble, and pebble among the streams. The result of the physicochemical aquatic environment analysis showed that there were no significant differences in water temperature, pH, DO, BOD, and EC among the three stream. In the fish fauna investigation, 530 individuals of 11 species of 3 families were collected in Bongseonsa Stream, 293 individuals of 12 species of 4 families were collected in Jojong Stream, and 361 individuals of 11 species of 4 families were collected in Sudong Stream. All three streams were dominated by Z. koreanus and Z. platypus. Six Korean endemic species appeared in each of the three streams, showing the high occurrence rate of indigenous species of 50.0% or more. The aggregation index analysis revealed that the mean dominance index ranged from 0.63 (${\pm}0.05$, BS) to 0.72(${\pm}0.01$, JJ), mean diversity index from 1.55 (${\pm}0.06$, JJ) to 1.78 (${\pm}0.11$, BS), mean evenness index from 0.71 (${\pm}0.03$, JJ) to 0.76 (${\pm}0.02$, BS), and mean richness index from 1.61 (${\pm}0.33$, JJ) to 1.73 (${\pm}0.24$, SD). The result indicated that the observed differences between the stream community indices were statistically nonsignificant. The similarity analysis showed that 75.4% similarity was divided into two groups of A and B and that the fish fauna on each analyzed point was similar. The quantitative habitat evaluation index (QHEI) analysis showed that the average value of QHEI was 151.0 (${\pm}46.0$), which means that it was a suboptimal habitat environment. The result of length-weight analysis of Z. koreanus populations showed that the regression coefficient b of the restoration population and the original habitat population were at 3.0 or higher while the condition factor had a positive slope. Moreover, it was found that the slopes of the regression coefficient b and condition factor of the original habitat population were larger than the restored population. The analysis of the length frequency distribution of the Z. koreanus population revealed that all three streams maintained the stable life cycle although it was found that the growth rate of the original habitat population was faster than the restored population in the one-year-old class. The result of the gonadosomatic index (GSI) analysis showed that the GSI median value of the Z. koreanus population in the restored habitat Bongseonsa Stream was higher than the population in the original habitat Jojong Stream and Sudong Stream for both of males and females.

Plot Size for Investigating Forest Community Structure(I) -Adequate Number of Plots of Tree Stratum in a Mixed Deciduous Forest Community at Sobaeksan Area- (삼림군집구조 조사를 위한 조사구 크기에 관한 연구(I) -소백산지역 활엽수혼효림군집 교목층의 적정 조사구수-)

  • 박인협;이경재;조재창
    • Korean Journal of Environment and Ecology
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    • v.6 no.2
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    • pp.162-167
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    • 1993
  • A mixed deciduous forest community in Mt. Sobaek was studied to determine the adequate number of plots of tree stratum for investigating forest community structure. Twenty l0m $\times$ l0m plots were set up iii the studied forest community, and species area curve. performance curve and statistical method were carried out. According to species-area curve, the minimal number of plots where a given percentage increase in number of plots produced less than the same percentage increase in number of species was eight. The minimal number of plots where a given percentage increase in number of plots produced less than the half of the percentage increase in number of plots was eleven. According to performance curve by importance value of the major species, the minimal number of plots where the dominant species was distinguished from the subdominant species was five. The minimal number of plots where the subdominant species was distinguished from each other was ten. Therefore, ten l0m $\times$ l0m plots seems to give an adequate sample for investigating structure of the studied forest community. Similarity index between the ten plots and total twenty plots was above 90%, and 95% confidence interval of species diversity of the ten plots was $\pm$ 0.073.

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Determining the Size of a Hankel Matrix in Subspace System Identification for Estimating the Stiffness Matrix and Flexural Rigidities of a Shear Building (전단빌딩의 강성행렬 및 부재의 강성추정을 위한 부분공간 시스템 확인기법에서의 행켈행렬의 크기 결정)

  • Park, Seung-Keun;Park, Hyun Woo
    • Journal of the Computational Structural Engineering Institute of Korea
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    • v.26 no.2
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    • pp.99-112
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    • 2013
  • This paper presents a subspace system identification for estimating the stiffness matrix and flexural rigidities of a shear building. System matrices are estimated by LQ decomposition and singular value decomposition from an input-output Hankel matrix. The estimated system matrices are converted into a real coordinate through similarity transformation, and the stiffness matrix is estimated from the system matrices. The accuracy and the stability of an estimated stiffness matrix depend on the size of the associated Hankel matrix. The estimation error curve of the stiffness matrix is obtained with respect to the size of a Hankel matrix using a prior finite element model of a shear building. The sizes of the Hankel matrix, which are consistent with a target accuracy level, are chosen through this curve. Among these candidate sizes of the Hankel matrix, more proper one can be determined considering the computational cost of subspace identification. The stiffness matrix and flexural rigidities are estimated using the Hankel matrix with the candidate sizes. The validity of the proposed method is demonstrated through the numerical example of a five-story shear building model with and without damage.

A Characteristic of Community Distribution on Benthic Macro-invertebrates in Major Streams of Jirisan Mountain (지리산 주요 수계의 저서성 대형무척추동물 군집분포의 특성)

  • Kim, Hyoung-Gon;Yoon, Chun-Sik;Hwang, Jong-Woo;Park, Eun-Hee;Cheong, Seon-Woo
    • Journal of Environmental Science International
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    • v.23 no.2
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    • pp.291-302
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    • 2014
  • We have studied characteristics of community structure on the benthic macro-invertebrates at twelve selected sites in upstream, midstream and downstream of Paemsagol, Piagol, Chilseongol and Daeseonggol, major streams of Jirisan Mountain, for three years from April 2008 to September 2010. As a result, 2 phyla, 3 classes, 11 orders, 41 families, 119 species and 4,449 individuals of benthic macro-invertebrates have been collected and classified in this study. Among them EPT group (Ephemeroptera, Plecoptera, Trichoptera), commonly appearing taxa in clean stream ecosystem, was found most frequently. The highest species number of benthic macro-invertebrates were collected in 2008, the year with lower climatic influence including heavy rain. In almost all of survey sites 80% or over of EPT group were counted, and St. 1 scored highest rate of EPT group at 92.59%. Most dominant species was Ecdyonurus kibumensis at 12.83% of dominance index, and subdominant species was Goerodes KUb at 6.81% of dominance index. The investigation of the feeding function group indicated that gathering-collectors were dominant with 26 species and 1,334 individuals, while the number of filtering-collectors was lowest with 11 species and 230 individuals. This result represents that the feeding function group of Jirisan Mountain is mountainous stream-specific one. Both diversity index and richness index were lowest at the midstream of Chilseongol (St. 5), while the midstreams of Daeseonggol (St. 11) and Piagol (St. 8) were highest in diversity and richness indices respectively. The analyses of linear regression and correlation were performed in order to investigate and to predict the appearance aspect of EPT group by altitude. The results showed that the ratio of Plecopteran species number has increased by the elevation of the altitude at 0.05 significance level. Cluster analysis was also carried out for evaluating environmental similarities among survey sites. As a result, upper regions of Paemsagol (St. 1) and Piagol have clustered as most similar sites each other, while the midstream of Piagol (St. 8) has separated with lower similarity value than other sites in species composition.

Automatic Coastline Extraction and Change Detection Monitoring using LANDSAT Imagery (LANDSAT 영상을 이용한 해안선 자동 추출과 변화탐지 모니터링)

  • Kim, Mi Kyeong;Sohn, Hong Gyoo;Kim, Sang Pil;Jang, Hyo Seon
    • Journal of Korean Society for Geospatial Information Science
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    • v.21 no.4
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    • pp.45-53
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    • 2013
  • Global warming causes sea levels to rise and global changes apparently taking place including coastline changes. Coastline change due to sea level rise is also one of the most significant phenomena affected by global climate change. Accordingly, Coastline change detection can be utilized as an indicator of representing global climate change. Generally, Coastline change has happened mainly because of not only sea level rise but also artificial factor that is reclaimed land development by mud flat reclamation. However, Arctic coastal areas have been experienced serious change mostly due to sea level rise rather than other factors. The purposes of this study are automatic extraction of coastline and identifying change. In this study, in order to extract coastline automatically, contrast of the water and the land was maximized utilizing modified NDWI(Normalized Difference Water Index) and it made automatic extraction of coastline possibile. The imagery converted into modified NDWI were applied image processing techniques in order that appropriate threshold value can be found automatically to separate the water and land. Then the coastline was extracted through edge detection algorithm and changes were detected using extracted coastlines. Without the help of other data, automatic extraction of coastlines using LANDSAT was possible and similarity was found by comparing NLCD data as a reference data. Also, the results of the study area that is permafrost always frozen below $0^{\circ}C$ showed quantitative changes of the coastline and verified that the change was accelerated.

Forest Structure in Relation to Altitude and Part of Slope in a Valley Forest at Odaesan National Park (오대산 국립공원지역 계곡부의 해발고와 사면부위에 따른 산림구조)

  • 박인협;류석봉;김례화
    • Korean Journal of Environment and Ecology
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    • v.9 no.2
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    • pp.126-132
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    • 1996
  • The Gugogdong-Horyongbong valley forest in Odaesan National Park area was studied to investigate forest structure in relation to altitude and part of slope. Forty-eight quadrats were set up in the valley forest along altitude of 800m to 1,500m and part of the slote. With increasing elevation the important values of Quercus mongolica and Rhododendron schlippenvachii increased, while those of Abies holophulla, Ulmus davidiana var. japonica and Lindera obtusiloba decreased. As going from lower part to upper part of the slope, the importance values of Quercus mongolica and Rhododendron schlippenbachii increased while those of Acer mono and Ulmus laciniata decreased. Species diversity tended to decreased as increasing elevation. The range of similarity indices between elevation belts, and parts of the slope were 56.3~73.4% and 61.9~71.8%, respectively. According to importance value and cluster analysis, the studied valley forest was classified into tree forest communities of Abies holophulla-deciduous tree species community in lower and middle parts of slope at low and middle elevation belts, Quercus mongolica- coniferous tree species community in upper part of slope at low and middle elevation belts and lower and middle parts of slope at high elevation belt and Quercus mongolica community in upper part of slope at high elevation belt and top area.

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A Correlation Analysis of the River Naturalness and Water Quality for Biological Habitat Evaluation (하천 생물 서식처 평가를 위한 하천 자연도와 수질의 상관성 분석)

  • Park Bong-Jin;Sung Young-Du;Jung Kwan-Sue
    • Journal of Korea Water Resources Association
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    • v.39 no.8 s.169
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    • pp.637-644
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    • 2006
  • In this study, the analysis of river naturalness and water quality were executed in the major rivers of the Nakdong River Basin. As a result, the assessment index of the General Evaluation was 1.428 to 4.107 as $1^{st}$ to $4^{th}$ grades. The River Shape was 1.929 to 4.429 as $2^{nd}$ to $4^{th}$ grades and the River Environment was 1.774 to 3.643 as $1^{st}$ to $4^{th}$ grades. As well, evaluation of water quality showed that concentration of pH was 7.102 to 8.497 mg/l, BOD was 0.748 to 5.271 mg/l, DO was 5.077 to 12.335 mg/l and 55 was 3.658 to 19.960 mg/l. The correlation between river naturalness and water quality was analyzed to investigate similarity and independence of river naturalness evaluation index. It was shown that coefficient of correlation was low with value of -0.1503 to -0.5886, therefore, was evaluated as independent.

A Synecological Study of the Alnus japonica Forests in Korea (우리나라 오리나무림의 군락생태학적 연구)

  • Cho, Joon-Hee;Bae, Kwan-Ho;Oh, Seung-Hwan;Kim, Jun-Soo;Cho, Hyun-Je
    • Journal of Korean Society of Forest Science
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    • v.109 no.2
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    • pp.124-135
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    • 2020
  • Alder (Alnus japonica) forests are representative of the wetland in East Asia, including Korea. In the past, alder forests were relatively common in various habitats such as mountains, riversides, back marshes, and alluvial plains. However, this plant community has recently become rare due to increasingly arid habitats and the influence of various land uses. In this study, we identify the synecological characteristics of alder (A. japonica) forests distributed naturally in the mountainous wetlands of Korea and provide basic data for their systematic conservation and management in the future. Based on vegetation survey data collected from 66 alder forests, community types were classified using the methods of the Zürich-Montpellier School of Phytosociology and two-way indicator species analysis. There were eight community types: Styrax obassia, Weigela subsessilis-Fraxinus mandschurica, Spiraea fritschiana, Viola verecunda, Impatiens textori-Spiraea salicifolia, Glyceria leptolepis, Molinia japonica, and Lindera obtusiloba-Quercus acutissima. These community types constituted a vegetation unit hierarchy of two communities, four subcommunities, and eight variants. In addition, the ecological characteristics of each community type were compared (including total coverage per 100 square meter, importance value index, constancy class, life-form composition, diversity indices, community similarity coefficient, and indicator species).

Isolation and Identification of Antagonistic Bacterium Active against Sclerotinia sclerotioum Causing Sclerotinia Rot on Crisphead Lettuce (결구상추 균핵병균(Sclerotinia sclerotioum)에 대한 길항세균의 분리 및 동정)

  • Kim, Han-Woo;Lee, Kwang-Youll;Baek, Jung-Woo;Kim, Hyun-Ju;Park, Jong-Young;Lee, Jin-Woo;Jung, Soon-Je;Moon, Byung-Ju
    • Research in Plant Disease
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    • v.10 no.4
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    • pp.331-336
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    • 2004
  • The fungus genus Sclerotinia contains a number of important plant pathogens. Vegetable growers in our country are probably most familiar with Sclerotinia sclerotiorum, the causes of sclerotinia rot on crisphead lettuce. S. sclerotiorum has a wide host range which can include lettuce as well as crops such as broccoli, cabbage, carrots, celery, beans, peppers, potatoes, stocks, and tomato. Some fungicides, including benomyl, are effective in some crops, but not all. So, we isolated a antagonistic bacteria that are active on sclerotinia rot caused by S. sclerotiorum and that can be used to control it. About 702 strains had been isolated from soil around plant roots in the field. Ten strains showed strong antifungal activity against S. sclerotiorum. In pot test for antagonistic activity, A-7 strain showed high control value against the pathogen when compared with others. The strain was, therefore, selected as a biocontrol candidate against sclerotinia rot and its biochemical properties and 16S rDNA sequence was analyzed. The A-7 strain was highly related to Bacillus subtilis and B. amyloliquefaciens. To confirm precise identification, we had performed gyr A gene sequences analysis. Its sequence had 96% similarity with B. amyloliquefaciens. Consequently, the isolate was identified as B. amyloliquefaciens A-7.