• Title/Summary/Keyword: reference database

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Impact of Open Access Models on Citation Metrics

  • Razumova, Irina K.;Kuznetsov, Alexander
    • Journal of Information Science Theory and Practice
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    • v.7 no.2
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    • pp.23-31
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    • 2019
  • We report results of selection-bias-free approaches to the analysis of the impact of open access (OA) models on citation metrics. We studied reference groups of Gold and Green OA articles and the group of non-OA (Paywall) articles with the new functionality of the Web of Science Core Collection database, the InCites platform of Clarivate Analytics, and the Dimensions database of Digital Science. For each reference group we obtained the values of the percent of cited articles and citation impact and their dependence on the depth of the citation period. Different research fields were analyzed in two schemas of the InCites platform. We report the higher values and growth rates of the citation metrics: citation impact and %Cited, in the OA reference groups over the Paywall group. The Green OA articles demonstrate the highest values of citation metrics among all the OA models. Dependence of the value of citation impact on citation period follows linear law with R2 values close to 0.9-1.0. The overall annual growth rates of citation impact of the Green OA, Gold OA, and the Paywall articles, k equal, respectively, 3.6, 2.4, and 1.4 in Dimensions and 4.6, 3.6, and 2.3 in the Web of Science Core Collection. We suppose that earlier results reported for the articles in pure OA journals vs. articles in Paywall journals were affected by the high citation impact of the Green and Hybrid OA articles that could not be elucidated in the Paywall journals at that time.

Evaluation of the Redundancy in Decoy Database Generation for Tandem Mass Analysis (탠덤 질량 분석을 위한 디코이 데이터베이스 생성 방법의 중복성 관점에서의 성능 평가)

  • Li, Honglan;Liu, Duanhui;Lee, Kiwook;Hwang, Kyu-Baek
    • KIISE Transactions on Computing Practices
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    • v.22 no.1
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    • pp.56-60
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    • 2016
  • Peptide identification in tandem mass spectrometry is usually done by searching the spectra against target databases consisting of reference protein sequences. To control false discovery rates for high-confidence peptide identification, spectra are also searched against decoy databases constructed by permuting reference protein sequences. In this case, a peptide of the same sequence could be included in both the target and the decoy databases or multiple entries of a same peptide could exist in the decoy database. These phenomena make the protein identification problem complicated. Thus, it is important to minimize the number of such redundant peptides for accurate protein identification. In this regard, we examined two popular methods for decoy database generation: 'pseudo-shuffling' and 'pseudo-reversing'. We experimented with target databases of varying sizes and investigated the effect of the maximum number of missed cleavage sites allowed in a peptide (MC), which is one of the parameters for target and decoy database generation. In our experiments, the level of redundancy in decoy databases was proportional to the target database size and the value of MC, due to the increase in the number of short peptides (7 to 10 AA). Moreover, 'pseudo-reversing' always generated decoy databases with lower levels of redundancy compared to 'pseudo-shuffling'.

2020 Korean Dietary Reference Intakes of selenium and a review of selenium database of foods by evaluating of selenium contents of the recommended menus (셀레늄의 2020 한국인 영양소 섭취기준 개정 및 권장식단의 셀레늄 함량 평가를 통한 식품의 셀레늄 데이터베이스 검토)

  • Choi, Kyungsuk;Lee, Okhee
    • Journal of Nutrition and Health
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    • v.55 no.4
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    • pp.430-440
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    • 2022
  • Selenium is an important trace mineral that plays an essential role in maintaining the body's immunity with oxidative stress defense and antioxidant activity, immunity, thyroid hormone control, defense against drug or heavy metal harm, and reducing the risk of chronic diseases. A selenium deficiency increases the risk of various chronic diseases, such as cancer, cardiovascular disease, diabetes, neurological disease, osteoarthritis, muscle necrosis and weakness, thyroid disease, and inflammatory diseases. This paper explains the criteria for establishing and revising selenium in the 2020 Dietary Reference Intake for Koreans (KDRIs) and reviews the current status of the selenium database and suggestions for setting the 2025 KDRIs in the future. In the 2020 KDRIs, the selenium intake with the maximum plasma selenoprotein P level was used as the criteria. The weight and coefficient of the variation were applied to the Chinese' reported values. Compared to 2015 KDRIs, there were some revisions in the selenium dietary reference intakes by gender and age according to the change in reference weight. To improve and revise selenium dietary reference intakes in the future, a selenium intervention study is needed to determine the maximum level of plasma selenoprotein P in Koreans. In addition, a revision of the selenium database of the nutritional assessment program (CAN-Pro 5.0) is needed. An analysis of the selenium content of foods should be expanded to assess the selenium intake accurately. In addition, research on the relationship between selenium intake and the biological indicators in the body is required for healthy people and subjects of special environments, such as patients and athletes with various oxidative stress.

A Study on the Cooperation Model for Virtual Reference Services in Public Libraries (공공도서관 가상참고봉사 협력모형개발을 위한 연구)

  • Cha, Mi-Kyeong;Kim, Soo-Jeong
    • Journal of the Korean Society for Library and Information Science
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    • v.40 no.4
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    • pp.367-383
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    • 2006
  • The purpose of this study is to develop a practical model for enhancing cooperative virtual reference services of public libraries in the nation. The research methods include an examination of model cases from Europe and the V.S. and also an electronic questionnaire survey of 375 public librarians (73% response rate). The study results suggest the need for 'a collaborative virtual reference room' which consists of the collaborative reference database, virtual reference desk, guidance and instruction designed by age groups and/or subjects.

A Study on the Reference Building based on the Building Design Trends for Non-residential Buildings (건축물 설계현황 분석을 통한 국내 비주거용 표준건물의 설정에 관한 연구)

  • Jeong, Young-Sun;Jung, Hae-Kwon;Jang, Hee-Kyung;Yu, Ki-Hyun
    • Journal of the Korean Solar Energy Society
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    • v.34 no.3
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    • pp.1-11
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    • 2014
  • The Korean government plans to introduce the building energy performance standard which regulates the annual energy consumption of buildings. This paper aimed to set up the reference building from database based on the building design trends for non-residential buildings. We surveyed the design data of 435 non-residential buildings which were granted building permission from 2007 to 2011. And we conducted estimation on the heating & cooling load and the energy consumption of the reference building using ECO2 program. From results, the reference building of non-residential buildings was office building which had a total 7 floors and $20,838m^2$ gross floor area. And it suggests the design reference data of building envelope, HAVC, heat source equipment and lighting system for the reference building. The total annual energy use of the reference building was $151.9kWh/m^2yr$.

A Study on Database Standardization Status and Plans (데이터베이스 표준화 현황 및 추진방향)

  • Ahn, Gye-Sung
    • Journal of Information Management
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    • v.29 no.4
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    • pp.1-22
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    • 1998
  • The domain of database standardization can be divided into three fields; general database, data, and database by basic reference model. The international activities for the database standardization are currently being proceeded variously and actively. This article analyzes the status of the activities of ISO/TC46 in the information & documentation and ISO/IEC JTC1/SC32 in the data management and interchange, and proposes a plan for strenthening the activities of the domestic technical committees related to these activities. This also presents the status of the legislative organizations of the domestic databases standardization and the directions of promoting their activities.

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Classification of Underwater Transient Signals Using MFCC Feature Vector (MFCC 특징 벡터를 이용한 수중 천이 신호 식별)

  • Lim, Tae-Gyun;Hwang, Chan-Sik;Lee, Hyeong-Uk;Bae, Keun-Sung
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.32 no.8C
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    • pp.675-680
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    • 2007
  • This paper presents a new method for classification of underwater transient signals, which employs frame-based decision with Mel Frequency Cepstral Coefficients(MFCC). The MFCC feature vector is extracted frame-by-frame basis for an input signal that is detected as a transient signal, and Euclidean distances are calculated between this and all MFCC feature. vectors in the reference database. Then each frame of the detected input signal is mapped to the class having minimum Euclidean distance in the reference database. Finally the input signal is classified as the class that has maximum mapping rate in the reference database. Experimental results demonstrate that the proposed method is very promising for classification of underwater transient signals.

A Study on National R&D Report Reference Technological Improvement (국가R&D보고서 참고문헌 기술항목 구축 개선방안 연구)

  • Lee, Kangsandajeong;Lee, Hyejin;Hyun, Mihwan
    • Journal of the Korea Convergence Society
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    • v.13 no.1
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    • pp.31-42
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    • 2022
  • The purpose of this study is to analyze the reference data of the National R&D Report database built by the Korea Institute of Science and Technology Information(KISTI) to derive problems and to find complementary points for the construction technical items in the system. To this end, we investigated the descriptions of references in the National R&D Report constructed in the KISTI DB and analyzed the construction process, guidelines, types, items, etc. Based on this, the appropriateness and accuracy of the classification results of the reference types constructed with the DB were checked. As a result, the problems of the items built into the system and corrections to the construction guidelines were derived. Through this, database construction can proceed efficiently and data quality is expected to improve. In addition, a follow-up study was proposed on the convergence service plan that can be provided in the future through standardization of technical regulations.

Conceptual Schema Analysis for Creation of Reference Sche (참조 스키마 생성을 위한 개념적 스키마 분석)

  • 김흥수
    • Journal of the Korea Society of Computer and Information
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    • v.7 no.4
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    • pp.83-88
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    • 2002
  • Large sets of conceptual schema have been constructed for database design. In recent times, the need of analytic aid for schema reuse is increasing. In this paper, it is presented analysis technique of conceptual schema, and experimented schema analysis for extraction of reference schema. It is desirable for integration of related schema to have been applied in case of similarity value above 0.6. Reference schema which is created through the analysis technique enable to describe concepts of them and can be the way of schema reuse. And a feature analysis can be effective measure to set details of analytic data which is necessary for extraction of reference schema.

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DATABASE CONSTRUCTION AND TEXTUAL ANALYSIS OF KOREAN ASTRONOMICAL ALMANACS (한국 역서 데이터베이스 구축 및 내용 분석)

  • Lee, Ki-Won;Ahn, Young-Sook;Mihn, Byeong-Hee;Shin, Jae-Sik
    • Publications of The Korean Astronomical Society
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    • v.26 no.1
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    • pp.1-24
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    • 2011
  • Korea Astronomy and Space Science Institute (KASI) has constructed online database of the Korean Astronomical Almanac as a part of the 'Knowledge and Information Business Project 2009' supported by the Ministry of Knowledge Economy. Throughout this project, KASI provides both digitized images and extracted text from the almanac covering approximately 240 years. The primary purpose of this paper is to serve as a reference for users of the almanac database. Hence, we introduce the calendar history and kinds of the astronomical almanac used in Korea, and explain the contents of the almanacs according to its appearance time. We also briefly mention the steps employed in constructing the database system and Web site. Since ancient times, astronomical almanacs have been an essential part of daily life. We, therefore, believe that the astronomical almanac database constructed by KASI will prove its usefulness in various fields, and particularly in the study of historical astronomy.