• 식물병연구
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• 제30권1호
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• pp.88-94
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• 2024

In July 2021, symptoms of soft rot were observed on the stems of Ficus carica in Yeongam, Jeollanamdo, Korea. To accurately diagnose the cause, infected stem was collected and bacterial strain was isolated. Among these, the pathogenic strain KNUB-08-21 was identified as Pectobacterium aroidearum through 16S rRNA gene sequencing and phylogenetic analysis based on the concatenated sequences of the dnaX, leuS, and recA genes. The affiliation of the isolate with this bacterial species was also confirmed by its biochemical characteristics obtained using API ID 32 GN system. Artificial inoculation confirmed the strain's pathogenicity in figs, causing significant damage to both stems and fruits. To our knowledge, this is the first report of P. aroidearum causing soft rot disease in F. carica in Korea.

• 한국미생물·생명공학회지
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• 제44권1호
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• pp.9-18
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• 2016

청국장에서 강력한 항균력을 지닌 2개의 Bacillus 균주들인 CJW15와 SSD8이 분리되었다. 16S rRNA와 recA 유전자들 염기서열 결정에 의해 두가지 균주 모두 B. amyloliquefaciens로 동정되었다. CJW15는 B. cereus ATCC14579, Listeria monocytogenes ATCC19111, Lactococcus lactis ATCC11454 들의 증식을 강력히 억제하며 SSD8은 B. cereus ATCC14579와 Enterococcus faecium ATCC19953 증식을 억제하였다. 두 균주들의 항균력은 $100^{\circ}C$, 15분 처리에도 감소하지 않았고 산성인 pH 3과 알칼리인 pH 12에서도 안정하였다. 트립신, 펩신, 프로테아제 K, 프로테아제 효소처리에 의해 CJW15 항균력은 변화가 없었지만 SSD8 항균력은 절반으로 감소하였다. 두 균주 공히 surfactin, fengycin, iturin, iturinA와 같은 lipopeptide 생합성 유전자들을 지니고 있고 subtilin과 같은 박테리오신 유전자들도 지니고 있다. 또 두 균주들은 혈전용해능을 지니고 있다.

• Korean Chemical Engineering Research
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• 제49권1호
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• pp.105-108
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• 2011

유가의 급등과 화석 연료에 의한 온난화 현상은 재생 가능한 대체 연료에 대한 필요성이 요구되었다. 수송용 바이오 연료를 비교하였을 때 에탄올보다 높은 알코올 경우 휘발유와 비슷한 장점을 갖는데 그 이유는 높은 에너지 밀도와 낮은 흡습성을 갖기 때문이다. 이러한 이유로 미생물의 발효는 지속적인 에너지를 얻을 수 있는 잠재적 생산자라 할 수 있다. 본 연구에서는 생물학적으로 생산되는 알코올 성분에 대하여 두 종의 세균과 한종의 효모인 Escherichia coli와 Clostridium acetobutylicum 그리고 Saccharomyces cerevisiae를 이용하여 바이오 알코올에 대한 세포 성장 정도와 함께 미생물내에 스트레스 반응 유전자들의 분석을 실시하였다. 분석한 알코올은 에탄올과 부탄올이며, 이들의 농도별 세균의 성장속도와 산화적 손상에 민감하게 반응하는 katG 유전자, 생물막 손상에 민감하게 반응하는 fabA 유전자, 단백질 손상에 민감하게 반응하는 grpE 유전자, 유전자 손상에 민감하게 반응하는 recA 유전자의 반응여부를 분석하였다. 그 결과, 에탄올과 부탄올 중 부탄올의 세포 독성이 더 높게 관찰되었으며, 부탄올의 경우 생물막 손상을 유발하는 세포내 독성효과를 지니고 있음을 확인하였다.

• The Plant Pathology Journal
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• 제27권1호
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• pp.59-67
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• 2011

A bacterial strain CH-67 which exhibits antagonism towards several plant pathogenic fungi such as Botrytis cinerea, Fulvia fulva, Rhizoctonia solani, Sclerotinia sclerotiorum, Colletotrichum sp. and Phytophthora sp. was isolated from forest soil by a chitin-baiting method. This strain was identified as Burkholderia cepacia complex (Bcc) and belonging to genomovar IX (Burkholderia pyrrocinia) by colony morphology, biochemical traits and molecular method like 16S rRNA and recA gene analysis. This strain was used to develop a bio-fungicide for the control of tomato leaf mold caused by Fulvia fulva. Various formulations of B. pyrrocinia CH-67 were prepared using fermentation cultures of the bacterium in rice oil medium. The result of pot experiments led to selection of the wettable powder formulation CH67-C containing modified starch as the best formulation for the control of tomato leaf mold. CH67-C, at 100-fold dilution, showed a control value of 85% against tomato leaf mold. Its disease control efficacy was not significantly different from that of the chemical fungicide triflumidazole. B. pyrrocinia CH-67 was also effective in controlling damping-off caused by Rhizoctonia solani PY-1 in crisphead lettuce and tomato plants. CH67-C formulation was recognized as a cell-free formulation since B. pyrrocinia CH-67 was all lethal during formulation process. This study provides an effective biocontrol formulation of biofungicide using B. pyrrocinia CH-67 to control tomato leaf mold and damping-off crisphead lettuce and tomato.

• 한국어병학회지
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• 제32권2호
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• pp.69-80
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• 2019

We performed MLSA (multilocus sequence analysis) and phenotypic characterization of Aliivibrio species isolated from walleye pollock (Gadus chalcogrammus) maintained in 3 different facilities of Gangwon Province, the east coast of Korea. Of 38 Aliivibrio species identified by 16S rDNA sequences, 12 strains were randomly selected and MLSA was conducted with 5 house-keeping genes (gapA, gyrB, pyrH, recA and rpoA) and 16S rDNA gene. Phylogenetic analysis and homology of the concatenated sequences (4,580 bp) with other Vibrionaceae genera revealed that 4 strains (GNGc16.1, YYGc16.1, YYGc16.2, GSGc18.1) were identified as Aliivibrio logei and one strain (GSGc16.1) as A. wodanis. One strain (GSGc17.1) was tentatively identified as A. logei, but needs further analysis because it did not belong to the same clade with A. logei type strain. 6 strains (GSGc17.2, GNGc16.2, GSGc16.2, GSGc17.3, GSGc18.2, GSGc17.4) need further investigation as potential novel species. Either phenotypic characterization or 16S rDNA sequence alone did not provide enough information for identification of Aliivibrio strains at the species level. A. logei and A. wodanis are generally known as non-pathogenic bacteria, but also known as opportunistic or secondary pathogens of cold water fishes. Cares should be taken to prevent potential outbreaks due to these bacteria, although there was no outbreaks during the sampling period.

• 한국미생물·생명공학회지
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• 제46권4호
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• pp.313-319
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• 2018

Halophilic lactic acid bacteria (LAB) were isolated from myeolchi-jeotgal (23% NaCl, w/v) fermented in jangdok (Korean earthenware) located outside a house. They were identified as Tetragenococcus halophilus by 16S rRNA and recA gene sequencing. Four T. halophilus isolates showing high protease activities were selected for further studies. Four strains grew well, reaching $OD_{600}$ values of 0.75-0.92 at 18% NaCl content (w/v) and 0.28-0.44 at 23% salt. They showed rapid growth, attaining $OD_{600}$ values of 1.1-1.2 at $20-30^{\circ}C$, but did not grow at $4^{\circ}C$. At $15^{\circ}C$, the highest $OD_{600}$ values, which exceeded 0.6, were observed at 20 days, and were higher than those of cultures at $37^{\circ}C$ and $42^{\circ}C$ (approximately 0.5). Four isolates grew best in broth where the initial pH was adjusted to 8 and did not grow at $pH{\leq}4$. T. halophilus BS2-36 showed the highest survival ratio of 18.7% after 2 hours of exposure at pH 3. BS2-36 showed the highest survival ratio (1.29%) in presence of 0.3% bile salts. T. halophilus BS2-36 seems a promising candidate as a starter for jeotgal and other fermented foods with high salinities.

• Asian-Australasian Journal of Animal Sciences
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• 제28권5호
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• pp.620-631
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• 2015

A total of 59 lactic acid bacteria (LAB) strains were isolated from corn stover silage. According to phenotypic and chemotaxonomic characteristics, 16S ribosomal DNA (rDNA) sequences and recA gene polymerase chain reaction amplification, these LAB isolates were identified as five species: Lactobacillus (L.) plantarum subsp. plantarum, Pediococcus pentosaceus, Enterococcus mundtii, Weissella cibaria and Leuconostoc pseudomesenteroides, respectively. Those strains were also screened for antimicrobial activity using a dual-culture agar plate assay. Based on excluding the effects of organic acids and hydrogen peroxide, two L. plantarum subsp. plantarum strains ZZU 203 and 204, which strongly inhibited Salmonella enterica ATCC $43971^T$, Micrococcus luteus ATCC $4698^T$ and Escherichia coli ATCC $11775^T$ were selected for further research on sensitivity of the antimicrobial substance to heat, pH and protease. Cell-free culture supernatants of the two strains exhibited strong heat stability (60 min at $100^{\circ}C$), but the antimicrobial activity was eliminated after treatment at $121^{\circ}C$ for 15 min. The antimicrobial substance remained active under acidic condition (pH 2.0 to 6.0), but became inactive under neutral and alkaline condition (pH 7.0 to 9.0). In addition, the antimicrobial activities of these two strains decreased remarkably after digestion by protease K. These results preliminarily suggest that the desirable antimicrobial activity of strains ZZU 203 and 204 is the result of the production of a bacteriocin-like substance, and these two strains with antimicrobial activity could be used as silage additives to inhibit proliferation of unwanted microorganism during ensiling and preserve nutrients of silage. The nature of the antimicrobial substances is being investigated in our laboratory.

• Asian-Australasian Journal of Animal Sciences
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• 제28권8호
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• pp.1123-1132
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• 2015

Winter wheat is a suitable crop to be ensiled for animal feed and China has the largest planting area of this crop in the world. During the ensiling process, lactic acid bacteria (LAB) play the most important role in the fermentation. We investigated the natural population of LAB in whole-crop wheat (WCW) and examined the quality of whole-crop wheat silage (WCWS) with and without LAB inoculants. Two Lactobacillus plantarum subsp. plantarum strains, Zhengzhou University 1 (ZZU 1) selected from corn and forage and grass 1 (FG 1) from a commercial inoculant, were used as additives. The silages inoculated with LAB strains (ZZU 1 and FG 1) were better preserved than the control, with lower pH values (3.5 and 3.6, respectively) (p<0.05) and higher contents of lactic acid (37.5 and 34.0 g/kg of fresh matter (FM), respectively) (p<0.05) than the control. Sixty LAB strains were isolated from fresh material and WCWS without any LAB inoculation. These LAB strains were divided into the following four genera and six species based on their phenotypic, biochemical and phylogenetic characteristics: Leuconostoc pseudomesenteroides, Leuconostoc citreum, Weissella cibaria, Lactococcus lactis subsp. lactis, Lactobacillus buchneri, and Lactobacillus plantarum subsp. plantarum. However, the prevalent LAB, which was predominantly heterofermentative (66.7%), consisted of Leuconostoc pseudomesenteroides, Leuconostoc citreum, Weissella cibaria, and Lactobacillus buchneri. This study revealed that most of isolated LAB strains from control WCWS were heterofermentative and could not grow well at low pH condition; the selective inoculants of Lactobacillus strains, especially ZZU 1, could improve WCWS quality significantly.

• 한국가축번식학회지
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• 제26권3호
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• pp.299-308
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• 2002

eCG(말 융모성성선자극 호르몬)$\beta$와 eLH(말 황체형성호르몬)$\beta$는 하나의 유전자로 코드 되어 있으며, eCG와 eLH는 당쇄의 구조에 있어서 차이가 있는데, LH는 sulfate가 CG는 sialylate가 수식되어 있다. eCG는 다른 동물에 있어서 강력한 FSH (난포자극)와 LH의 이중활성을 나타내어 아주 특이하고, 많은 탄수화물로 수식되어 있는 당단백질 호르몬이다. eCG의 이러한 이중활성은 성선 자극호르몬의 구조, 기능 및 수용체와 이들 호르몬과의 특이결합에 대하여 분자 생물학적인 관점에서 연구하는데 아주 흥미롭다 따라서, eCG는 당쇄의 구조와 생화학적인 기능에서 아주 특이한 분자이다. 이러한 중요점을 당쇄첨가부위의 돌연변이를 통하여 분석한 결과, LH의 활성에서는 eCG$\alpha$의 56번 당쇄가 필수불가결한 역할을 하지만, eCG$\beta$의 카르복실기 말단의 O-linked 당쇄는 중요하지 않은 것으로 관찰되었다. 한편, N- 및 O-linked 당쇄 모두는 FSH활성에는 중요한 기능을 가지고 있는데, 양쪽 당쇄의 제거는 오히려 FSH 활성을 증가시켰다. 따라서, eCG의 LH와 FSH의 이중활성은 $\alpha$의 N-linked 당쇄의 제거와, $\beta$의 O-linked 당쇄를 제거함으로써 완전히 분리할 수 있으며, eCG에 있어서 당쇄는 생화학적 활성에 대하여 아주 중요하게 작용한다는 새로운 사실이 밝혀졌다. 단일체인 eCG($\beta$의 C-terminal에 u를 연결한)도 eCG$\alpha$/$\beta$ 및 천연형 eCG와 비교한 결과 효율적으로 분비되어지고 완전한 LH와 FSH 활성을 나타내었다. 이러한 결과들은 eCG 분자에 있어서 지금까지 문제시되어왔던 LH활성을 나타내지 않고, 높은 FSH 활성만을 나타내는 특이한 모델을 만들 수가 있으며, 현재 단일체인 분자에 있어서 당쇄의 기능에 대한구축은 각 단체의 결합, 분비에 영향을 미치는 당쇄 돌연변이 연구에 아주 유용할 것으로 사료된다.