• Title/Summary/Keyword: rapid detection method

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Damage detection using both energy and displacement damage index on the ASCE benchmark problem

  • Khosraviani, Mohammad Javad;Bahar, Omid;Ghasemi, Seyed Hooman
    • Structural Engineering and Mechanics
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    • v.77 no.2
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    • pp.151-165
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    • 2021
  • This paper aims to present a novelty damage detection method to identify damage locations by the simultaneous use of both the energy and displacement damage indices. Using this novelty method, the damaged location and even the damaged floor are accurately detected. As a first method, a combination of the instantaneous frequency energy index (EDI) and the structural acceleration responses are used. To evaluate the first method and also present a rapid assessment method, the Displacement Damage Index (DDI), which consists of the error reliability (β) and Normal Probability Density Function (NPDF) indices, are introduced. The innovation of this method is the simultaneous use of displacement-acceleration responses during one process, which is more effective in the rapid evaluation of damage patterns with velocity vectors. In order to evaluate the effectiveness of the proposed method, various damage scenarios of the ASCE benchmark problem, and the effects of measurement noise were studied numerically. Extensive analyses show that the rapid proposed method is capable of accurately detecting the location of sparse damages through the building. Finally, the proposed method was validated by experimental studies of a six-story steel building structure with single and multiple damage cases.

Rapid and Visual Detection of Barley Yellow Dwarf Virus by Reverse Transcription Recombinase Polymerase Amplification with Lateral Flow Strips

  • Kim, Na-Kyeong;Lee, Hyo-Jeong;Kim, Sang-Min;Jeong, Rae-Dong
    • The Plant Pathology Journal
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    • v.38 no.2
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    • pp.159-166
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    • 2022
  • Barley yellow dwarf virus (BYDV) has been a major viral pathogen causing significant losses of cereal crops including oats worldwide. It spreads naturally through aphids, and a rapid, specific, and reliable diagnostic method is imperative for disease monitoring and management. Here, we established a rapid and reliable method for isothermal reverse transcription recombinase polymerase amplification (RT-RPA) combined with a lateral flow strips (LFS) assay for the detection of BYDV-infected oat samples based on the conserved sequences of the BYDV coat protein gene. Specific primers and a probe for RT-RPA reacted and optimally incubated at 42℃ for 10 min, and the end-labeled amplification products were visualized on LFS within 10 min. The RT-RPA-LFS assay showed no cross-reactivity with other major cereal viruses, including barley mild mosaic virus, barley yellow mosaic virus, and rice black streaked dwarf virus, indicating high specificity of the assay. The sensitivity of the RT-RPA-LFS assay was similar to that of reverse transcription polymerase chain reaction, and it was successfully validated to detect BYDV in oat samples from six different regions and in individual aphids. These results confirm the outstanding potential of the RT-RPA-LFS assay for rapid detection of BYDV.

Rapid detection of deformed wing virus in honeybee using ultra-rapid qPCR and a DNA-chip

  • Kim, Jung-Min;Lim, Su-Jin;Kim, SoMin;Kim, MoonJung;Kim, ByoungHee;Tai, Truong A;Kim, Seonmi;Yoon, ByoungSu
    • Journal of Veterinary Science
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    • v.21 no.1
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    • pp.4.1-4.9
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    • 2020
  • Fast and accurate detection of viral RNA pathogens is important in apiculture. A polymerase chain reaction (PCR)-based detection method has been developed, which is simple, specific, and sensitive. In this study, we rapidly (in 1 min) synthesized cDNA from the RNA of deformed wing virus (DWV)-infected bees (Apis mellifera), and then, within 10 min, amplified the target cDNA by ultra-rapid qPCR. The PCR products were hybridized to a DNA-chip for confirmation of target gene specificity. The results of this study suggest that our method might be a useful tool for detecting DWV, as well as for the diagnosis of RNA virus-mediated diseases on-site.

Rapid, Sensitive, and Specific Detection of Clostridium tetani by Loop-Mediated Isothermal Amplification Assay

  • Jiang, Dongneng;Pu, Xiaoyun;Wu, Jiehong;Li, Meng;Liu, Ping
    • Journal of Microbiology and Biotechnology
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    • v.23 no.1
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    • pp.1-6
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    • 2013
  • Tetanus is a specific infectious disease, which is often associated with catastrophic events such as earthquakes, traumas, and war wounds. The obligate anaerobe Clostridium tetani is the pathogen that causes tetanus. Once the infection of tetanus progresses to an advanced stage within the wounds of limbs, the rates of amputation and mortality increase manifold. Therefore, it is necessary to devise a rapid and sensitive point-of-care detection method for C. tetani so as to ensure an early diagnosis and clinical treatment of tetanus. In this study, we developed a detection method for C. tetani using loop-mediated isothermal amplification (LAMP) assay, wherein the C. tetani tetanus toxin gene was used as the target gene. The method was highly specific and sensitive, with a detection limit of 10 colony forming units (CFU)/ml, and allowed quantitative analysis. While detecting C. tetani in clinical samples, it was found that the LAMP results completely agreed with those of the traditional API 20A anaerobic bacteria identification test. As compared with the traditional API test and PCR assay, LAMP detection of C. tetani is simple and rapid, and the results can be identified through naked-eye observation. Therefore, it is an ideal and rapid point-of-care testing method for tetanus.

Detecting Techniques for Marine-derived Pathogens: Grouping and Summary (해양 유래의 병원성 미생물 검출방법: 분류 및 요약)

  • Hwang, Byeong Hee;Cha, Hyung Joon
    • Journal of Marine Bioscience and Biotechnology
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    • v.6 no.1
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    • pp.1-7
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    • 2014
  • Marine-derived pathogens threat health and life of human and animals. Therefore, rapid and specific detection methods need to be developed. Here, we summarized various groups of detection methods, including conventional method, flow cytometry, nucleic acid-based method, and protein-based method. In addition, perspective of detection technique was discussed as a unified detection system for pathogens.

Application of Buoyant Density Centrifugation Method for the Rapid Detection of Feline Calicivirus in Oyster and Lettuce as Norovirus Surrogate

  • Cho, Yun-Sik;Lee, Kang-Whie;Jang, Keum-Il;Ahn, Jun-Bae;Kim, Kwang-Yup
    • Food Science and Biotechnology
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    • v.17 no.5
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    • pp.925-930
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    • 2008
  • Norovirus has become the most common cause of human gastroenteritis in developed countries. Detection procedures of foodborne viruses from foods require several steps. The concentration step using polyethylene glycol (PEG) is time-consuming and the detection efficiency of reverse transcription-polymerase chain reaction (RT-PCR) is affected by inhibitors from food components. In this study, a rapid detection method based on buoyant density centrifugation was developed to replace the time-consuming chloroform-polyethylene glycol-Tris Tween method. Feline calicivirus that belongs to the family Caliciviridae was used as a surrogate model for norovirus. After artificial inoculation of feline calcivirus (FCV) to oyster and lettuce, 830 ${\mu}L$ of homogenized sample suspension was layered on the top of 670 ${\mu}L$ 20% percoll and centrifuged. Then RNA extraction step was proceeded with the supernatant. By varying several physical conditions, the detection limits were lowered to $2.4{\times}10^2$ PFU per 1 g in oyster and $2.4{\times}10^0$ PFU per 1 g in lettuce. The protocol obtained in this study could be used to develop new detection method for norovirus in foods.

Development of an Indirect Non-Competitive Enzyme-Linked Immunosorbent Assay for the Detection of Cronobacter muytjensii in Infant Formula Powder (유아용 조제분유 내 Cronobacter muytjensii 검지를 위한 간접 비경합 면역분석법의 개발)

  • Song, Xinjie;Kim, Myunghee
    • The Korean Journal of Food And Nutrition
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    • v.26 no.4
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    • pp.936-944
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    • 2013
  • Cronobacter muytjensii is an important foodborne pathogen as a potential risk in infant formula powder (IFP). To develop a new and sensitive method for the detection of Cronobacter spp. in IFP, an immunoglobulin G (IgG) specific for C. muytjensii (formerly known as Enterobacter sakazakii ATCC 51329) was developed. Further, an indirect noncompetitive enzyme-linked immunosorbent assay (INC-ELISA) was developed by using the anti-C. muytjensii IgG. As a result, this newly developed INC-ELISA method was found very sensitive for C. muytjensii with detection limit of $6.5{\times}10^3CFU/ml$ in pure culture and 1 cell/25 g of IFP. This INC-ELISA method also displayed excellent specificity for C. muytjensii showing no cross-reactivity with other strains of Cronobacter genus and 11 other foodborne pathogenic strains. These results show that the developed INC-ELISA method was very sensitive, efficient, and rapid for the detection of C. muytjensii. Hence, this method could be applied to the development of diagnostic kits for the rapid and easy detection of C. muytjensii.

Direct Identification of Vibrio vulnificus by PCR Targeting Elastase Gene

  • Lee, Jae-Won;Jun, In-Joon;Kwun, Hyun-Jin;Jang, Kyung-Lib;Cha, Jae-Ho
    • Journal of Microbiology and Biotechnology
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    • v.14 no.2
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    • pp.284-289
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    • 2004
  • A PCR assay for the rapid detection of Vibrio vulnificus strains was developed using a virulence gene for elastase found in various Vibrio species. The DNA sequences in the elastase gene facilitated the identification of a species-specific probe for pathogenic V. vulnificus strains from both clinical and environmental sources. Using an elastase gene-based PCR reaction, a species-specific 507-bp PCR product was visualized by agarose gel electrophoresis. Three different DNA extraction methods were then compared to improve the simplicity and rapidity of detection. A PCR assay using the conventional DNA extraction or boiling method was able to detect as few as 25 V. vulnificus cells, making the detection limits at least 1-log-scale lower than that for the EDT A-treated DNA extraction method. In particular, the boiling method, which does not require purification of the chromosomal DNA, was very effective in terms of simple and rapid detection. Meanwhile, the detection limit in a mixed bacterial culture that included other bacteria, such as Escherichia coli or Bacillus subtilis, was two V. vulnificus cells, which was 1-log-scale lower than that for the control. Accordingly, when coupled with a new DNA extraction method, the elastase gene-based PCR can provide a rapid, specific, and sensitive method for identifying V. vulnificus in clinical and environmental samples.

A Sensor Fault Detection for Boiler-Turbine Control System (보일러-터빈 제어시스템의 측정기 고장검출)

  • Yoo, Seog Hwan
    • Journal of Applied Reliability
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    • v.14 no.1
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    • pp.37-43
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    • 2014
  • This paper deals with a design of observer based fault detection filter for a boiler-turbine control system. The goal is to present a method for rapid sensor fault detection in order to enhance the reliability of boiler-turbine operation in the thermal power plant. Our fault detection filter can be designed via solutions of linear matrix inequalities. In order to demonstrate the efficacy of our design method, numerical simulations are provided.

A Study on Integrated Fire Alarm System for Safe Urban Transit (안전한 도시철도를 위한 통합 화재 경보 시스템 구축의 연구)

  • Chang, Il-Sik;Ahn, Tae-Ki;Jeon, Ji-Hye;Cho, Byung-Mok;Park, Goo-Man
    • Proceedings of the KSR Conference
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    • 2011.10a
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    • pp.768-773
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    • 2011
  • Today's urban transit system is regarded as the important public transportation service which saves passengers' time and provides the safety. Many researches focus on the rapid and protective responses that minimize the losses when dangerous situation occurs. In this paper we proposed the early fire detection and corresponding rapid response method in urban transit system by combining automatic fire detection for video input and the sensor system. The fire detection method consists of two parts, spark detection and smoke detection. At the spark detection, the RGB color of input video is converted into HSV color and the frame difference is obtained in temporal direction. The region with high R values is considered as fire region candidate and stepwise fire detection rule is applied to calculate its size. At the smoke detection stage, we used the smoke sensor network to secure the credibility of spark detection. The proposed system can be implemented at low prices. In the future work, we would improve the detection algorithm and the accuracy of sensor location in the network.

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