• Title/Summary/Keyword: ranavirus

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Comparison of detective ranavirus with major capsid protein gene from infected frogs (Pelophylax nigromaculatus and Lithobates catesbeianus) in South Korea

  • Jongsun, Kim;Nam-Ho, Roh;Jaejin, Park;Daesik, Park
    • Journal of Ecology and Environment
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    • v.46 no.4
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    • pp.276-281
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    • 2022
  • Ranaviruses are a primary cause of amphibian extinctions. More consistent ranavirus-infection reports and genetic characterizations of identified viruses are urgently needed, particularly from Asian countries. The objectives of this study were to obtain the partial major capsid protein (MCP) gene sequences (506 bp) of the ranavirus responsible for infecting frogs in South Korea, as our previous research had confirmed using qPCR, and to evaluate their genetic relationships with other previously reported ranavirus sequences. Three different ranavirus MCP sequences were obtained from Pelophylax nigromaculatus and Lithobates catesbeianus. All six different types of MCP sequence from the ranavirus identified in South Korea to date belonged to the Frog virus 3 (FV3)-like virus group in the genus Ranavirus. To better understand the origin and spread of ranaviruses in South Korea, further infection reports and full genome analyses of the identified ranaviruses are needed.

First detection of ranavirus in a wild population of Dybowski's brown frog (Rana dybowskii) in South Korea

  • Park, Jaejin;Grajal-Puche, Alejandro;Roh, Nam-Ho;Park, Il-Kook;Ra, Nam-Yong;Park, Daesik
    • Journal of Ecology and Environment
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    • v.45 no.1
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    • pp.10-16
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    • 2021
  • Background: Ranavirus is an emerging infectious disease which has been linked to mass mortality events in various amphibian species. In this study, we document the first mass mortality event of an adult population of Dybowski's brown frogs (Rana dybowskii), in 2017, within a mountain valley in South Korea. Results: We confirmed the presence of ranavirus from all collected frogs (n = 22) via PCR and obtained the 500 bp major capsid protein (MCP) sequence from 13 individuals. The identified MCP sequence highly resembled Frog virus 3 (FV3) and was the same haplotype of a previously identified viral sequence collected from Huanren brown frog (R. huanrenensis) tadpoles in South Korea. Human habitat alteration, by recent erosion control works, may be partially responsible for this mass mortality event. Conclusion: We document the first mass mortality event in a wild Korean population of R. dybowskii. We also suggest, to determine if ranavirus infection is a threat to amphibians, government officials and researchers should develop continuous, country-wide, ranavirus monitoring programs of Korean amphibian populations.

High ranavirus infection rates at low and extreme temperatures in the tadpoles of Japanese treefrogs (Dryophytes japonicus) that breed in rice paddies in the summer

  • Nam-Ho Roh;Jongsun Kim;Jaejin Park;Daesik Park
    • Journal of Ecology and Environment
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    • v.47 no.2
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    • pp.35-41
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    • 2023
  • Background: Several species of amphibians in agricultural areas are often infected with ranaviruses; however, the biological or ecological factors that cause this infection are not well understood. In this study, we investigated whether local tadpole density, Gosner developmental stage, and weather conditions affected ranavirus infection in Dryophytes japonicus tadpoles in rice paddies over three months. Results: During the study, eight samplings were undertaken between June 6 and August 21, 2022. No die-off of tadpoles occurred, but 20 of 110 tadpoles (18.8%) were found to be infected with ranavirus. The tadpole density at the sampling site and Gosner stage of the sampled tadpoles were not related to the daily ranavirus infection rate. The mean daily highest temperature during the two weeks prior to the sampling date and the mean daily lowest and highest temperatures during the week prior to the sampling date were negatively related to the daily infection rate. Conclusions: Our results suggest that low and extreme temperatures caused by flooding and draining of paddy fields or climate change in summer could be a significant risk factor for ranavirus infection in summer-breeding frogs in agricultural areas.

PCR Detection of Ranavirus in Gold-spotted Pond Frogs (Rana plancyi chosenica) from Korea

  • Kim, Suk;Sim, Mi-Yeong;Eom, Ahn-Heum;Park, Dae-Sik;Ra, Nam-Yong
    • Korean Journal of Environmental Biology
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    • v.27 no.1
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    • pp.110-113
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    • 2009
  • In recent years, there has been a rapid global decline in amphibian populations, and infectious diseases have been associated with this decline. Diseased Gold-spotted pond frogs (Rana plancyi chosenica) were collected from a frog farm in Korea and identified using morphological and molecular analysis to identify the disease. The typical symptoms of ranaviral infection were observed in the tadpoles and adults frogs. The nucleotide sequence analysis revealed that the sequences showed the closest similarity with sequences to Frog virus 3, which belongs to the genus Ranavirus.

Population Viability Analysis of a Gold-spotted Pond Frog (Rana chosenica) Population: Implications for Effective Conservation and Re-introduction (금개구리 (Rana chosenica) 개체군의 생존분석: 개체군의 효과적인 보존과 야생복귀를 위한 제안)

  • Cheong, Seok-Wan;Sung, Ha-Cheol;Park, Dae-Sik;Park, Shi-Ryong
    • Korean Journal of Environmental Biology
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    • v.27 no.1
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    • pp.73-81
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    • 2009
  • Population viability analysis of a Gold-spotted pond frog (Rana chosenica) population at Cheongwon-gun, Chungbuk, in South Korea was conducted and we proposed several suggestions for effective conservation and re-introduction of the species. Simulating a developed model over 1,000 times predicted that the population will exist over 30 years with a relatively low growth rate of 0.113, but with a high probability of extinction as 81.1%. Population growth and extinction probability were the most greatly depended on the rate of successful metamorphosis. In the case of outbreak of amphibian diseases such as Chytridiomycosis and Ranavirus, the population will be easily extinct within 4 years with 100% probability. In a habitat of which carrying capacity is 200, to successfully re-introduce an extinct population, it is initially needed to put 100 individuals of which 83% is males and its age structure is normal-distributed. If we additionally conducts artificial supplementation of 10% individuals every 2 years from 4 years to 10 years after initial reintroduction, the population will become a stable with 0.297 growth rate and 0.290 extinction rate. Our results are the first case of amphibian population viability analysis in Korea and could be used to develop effective conservation and re-introduction plans for endangered Gold-spotted pond frog.