• Title/Summary/Keyword: purplish clam

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Geographical Variations and Genetic Distances of Three Saxidomus purpuratus Populations ascertained by PCR Analysis

  • Yoon, Jong-Man
    • Development and Reproduction
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    • v.19 no.4
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    • pp.259-264
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    • 2015
  • Genomic DNA samples isolated from geographical purplish Washington clam (Saxidomus purpuratus) were obtained from three different regions in the Korean Peninsula: Geoje (Geoje population; GJP), Gunsan (Gunsan population; GSP) and a site of North Korea (North Korea population; NKP). The seven primers generated the total 369 loci that can be scored from the GSP clam population. 356 fragments were generated from the NKP clam population. The complexity of the banding patterns varies dramatically between the primers and three localities. In this study, 319 loci were identified in the purplish Washington clam from Geoje and 369 in the clam population from Gunsan: 221 specific loci (69.3%) in the GJP clam population and 300 (81.3%) in the GSP population. These results demonstrate that the primer detected a large quantity of specific fragments, suggesting that the genetic variation in the GSP is higher than in the GJP population. In particular, the BION-28 primer gave DNA profiles with more fragments than the other six primers in the NKP population. The oligonucleotides primer BION-75 produced 21 unique loci to each population, which were ascertaining each population, approximately 250 bp, 300 bp and 400 bp, in the GJP population. Outstandingly, the primer BION-50 detected 21 shared loci by the three populations, major and/or minor fragments of sizes 150 bp, which were matching in all samples. With regard to average bandsharing value (BS) results, individuals from GJP population (0.743) displayed higher bandsharing values than did individuals from GSP population (0.606). In the present study, the dendrogram gained by the seven oligonucleotides primers indicates three genetic clusters: cluster 1 (GEOJE 01 ~ GEOJE 07), cluster 2 (GUNSAN 08 ~ GUNSAN 14), cluster 3 (N.KOREA 15 ~ N.KOREA 21). Among the twenty one clams, the shortest genetic distance that revealed significant molecular differences was between individuals 08 and 09 from the NKP population (genetic distance = 0.073), while the longest genetic distance among the twenty-one individuals that demonstrated significant molecular differences was between individuals GEOJE no. 03 and GUNSAN no. 09 (genetic distance = 0.669). Comparatively, individuals of GJP population were properly closely related to that of NKP population, as revealed in the hierarchical dendrogram of genetic distances. In due course, PCR analysis has revealed the significant genetic distance among three purplish Washington clam populations. PCR fragments discovered in this study could be valuable as a DNA marker of the three geographical clam populations to distinguish.

Stock Assessment of Purplish Washington Clam, Saxidomus purpuratus in the Southern Coastal Waters of Korea (한국 남해안 개조개 Saxidomus purpuratus의 자원평가)

  • Kim, Yeong-Hye;Kwon, Dae-Hyeon;Lee, Dong-Woo;Chang, Dae-Soo;Kim, Jong-Bin;Kim, Seong-Tae;Ryu, Dong-Ki
    • The Korean Journal of Malacology
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    • v.23 no.1
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    • pp.31-38
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    • 2007
  • Population ecological parameters and stock biomass of the purplish washington clam, Saxidomus purpuratus (Sowerby), in the southern coastal areas of Korea were determined based on the fishery data from the Divers Fisheries Cooperative and other available biological data. Instantaneous coefficient of total mortality (Z) of purplish Washington clam was estimated to be 0.7479/year. The estimated instantaneous coefficient of natural mortality (M) was 0.2012/year. From the values of Z and M, the instantaneous coefficient of fishing mortality coefficient (F) for the recent years was calculated to be 0.4578/year. The age of purplish Washington clam at its first capture ($t_c$) was 2.7506 year. Yield-per-recruit and spawning biomass-per-recruit were estimated under harvest strategies that bases on $F_{max}$, $F_{0.1}$, $F_{35%}$ and $F_{40%}$ were shown as 81.60 g, 61.68 g, 115.07 g and 131.51 g, respectively. The acceptable biological catch (ABC) was estimated to be about 1,404 metric tons.

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Taste Compounds and Reapprearance of Functional Flavoring Substances from Low-Utilized Shellfishes (연안산 저활용 패류를 이용한 기능성 풍미소재의 정미성분 및 정미발현)

  • OH Kwang-Soo;HEU Min-Soo;PARK Hee-Yul
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.31 no.6
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    • pp.799-805
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    • 1998
  • In present paper, we examined the flayer constituents and functionality of two stage enzyme hydrolysates (TSEH) of purplish clam and oyster, and also examined reappearance of oyster flavors through repreparation of individual flayer constituents. Total free amino acid contents in TSEH was $1943.0mg\%$ for purplish clam and was $5066.2 mg\%$ for oyster, respectively, Major free amino acids in purplish clam extracts were taurine, glutamic acid, glycine, alanine, Iysine and arginine, and in oyster extracts were taurine, asparagine, glutamic acid, valine, leucine, alanine, Iysine and arginine. As for nucleotides and related compounds, AMP was the principal component though small amounts in TSEH of purplish clam and oyster, and also contents of TMAO, total creatinine, and betaine were $41.2 mg\%,\;35,9 mg\%$ and $220.9 mg\%$ for that of purplish clam and $3.51 mg\%,\;33.4 mg\%$ and $380.9 mg\%$ that of oyster, respectively. The major inorganic ions in TSEH of both samples were Na, K, P, Cl and $PO_4$, and major non-volatile organic acid was succinic acid. The TSEH of purplish clam and oyster revealed very higher inhibition effect ($84.1\%,\;77.0\%$) in ACE inhibition than that ($0\~44.7\%$) of water and autolytic extract. A synthetic oyster extract prepared from pure chemicals on the basis of the analytical data on the TSEH, satisfactorily reproduced the taste of the natural extract except for a slight lack of mildness and odor. From the omission test the major taste compounds of oyster extract were free amino acid and inorganic ions. The quaternary ammonium bases, nucleotides and related compounds seemed to net an auxiliary role in taste of that.

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Genetic Relationship of the Five Venerid Clams유 (Bivalvia, Veneridae) in Korea (한국산 백합과 5종의 유전적 유연관계)

  • 정형택;김정;신종암;서호영;최상덕
    • Journal of Aquaculture
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    • v.17 no.4
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    • pp.251-257
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    • 2004
  • The random amplified polymorphic DNAs (RAPD) technique was used to characterize the genetic relationship of five species from in the family of Veneridae which is one of the commercially important clam family in Korea. The veneride clams' DNA were extracted from adductor muscular by the proteinase K-phenol method. Among 20 primers, 15 unit primers were amplified and produced at least, 2 or 3 from the top band. Genetic similarity between the purplish washington, Saxidomus purpuratus and the hard clam, Meretrix lusoria was the highest (0.87); the lowest genetic similarity (0.46) was formed between the little clam, Ruditapes philppinarum and the purplish washington, S. purpuratus. The genetic relationship between the venus clam, Protothaca jedoensis and the little clam, R. philppinarum was a closer than those between others. These results may indicate that the method of artificial seeding production of P. jedoensis for the propagation of resources can be focused on R. philppinarum.

ESR Spectroscopy for Detecting Gamma-Irradiated Shellfishes (방사선 조사된 조개류의 확인을 위한 ESR Spectroscopy의 이용)

  • 남혜선;양재승
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.30 no.1
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    • pp.43-47
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    • 2001
  • Electron spin resonance (ESR) spectroscopy was used to investigate the effect of irradiation dose on the ESR signal intensity and to identify the stability of radicals after 9 weeks of storage in order to detect irradiated shellfishes. The irradiated shellfishes (short-necked clam, purplish washington clam, freshwater clam, jackknifed clam, scallop and hard-shell mussel) presented an asymmetric absorption in shape at $g_{1}$=2.002~2.003 and $g_{2}$=1.998. The strength of the ESR signal increased linearly with the applied doses (1~7 kGy). A highly positive correlation coefficients ($R^{2}$=0.9136~0.9896) were obtained between the irradiation dose and corresponding ESR signal intensity. The intensity of the signals after irradiation was stable even after 9 weeks of storage at 5$\pm$1$^{\circ}C$.

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Gonad Development and Reproductive Cycle of the Purplish Washington Clam, Saxidomus purpuratus (Bivalvia: Veneridae) from Gangjin Bay (강진만 개조개, Saxidomus purpuratus의 생식소 발달과 생식주기)

  • Shin, Yun-Kyung;Choi, Nack-Joong;Oh, Bong-Se;Jung, Ae-Jin;Kim, Sung-Yeon
    • The Korean Journal of Malacology
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    • v.23 no.2
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    • pp.165-172
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    • 2007
  • Gonadal development, reproductive cycle and sex ratio of the purplish Washington clam, Saxidomus purpuratus were investigated monthly by histological observations. Samples were collected from May 2006 to April 2007 in the Gangjin Bay of Namhea, Gyeongsangnam-do, Korea. The clams are dioecious. The gonads consist of a number of oogenic follicle and acinus. Monthly changes in the gonad index reached a maximum in April and a minimum in July. Monthly changes in the condition index reached a maximum in June and a minimum in November. The reproductive cycle of this species can be divided into five successive stages: the recovery and resting stage (June to December), early active stage (January to April), late active stage (February to July), ripe stage (March to October), spent stage (April to October). The main spawning of the clam occurred in July and September in Gangjin Bay. The sex ratio of female to male was not significantly different from 1:1.

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Reproductive Biology of the Purplish Washington Clam, Saxidomus prupuratus in the East China Sea (동중국해에 분포하는 개조개의 생식생물학적 연구)

  • Kim, Young-Seop;Kim, Yeong-Hye;Kim, Jon-Bin;Chang, Dae-Soo;Lee, Dong-Woo;Kang, Hyun-Jung
    • The Korean Journal of Malacology
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    • v.26 no.4
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    • pp.261-265
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    • 2010
  • Reproductive biology of the purplish Washington clam, Saxidomus purpuratus was investigated based on the samples captured in Jinhae Bay, the East China Sea from January to December 2002. The gonad index (GI) began to increase in January, reached the maximum value in March. The reproductive cycle of this species can be divided into five successive stages: the early active stage (from November to January), the late active stage (from December to February), the ripe stage (from February to May and October), the spawned stage (from May to December), and inactive stage (from November to December). The spawning period was from April to December, and the main spawning occurred between June and August. The shell length at 50% group maturity was estimated to be 71.85 mm. The Sex ratio of this species was not significantly different a 1:1 sex ratio (P > 0.05).

Reproduction study of purplish Washington clam, Saxidomus purpuratus in Jinhae bay, Korea : Spawning and shell length at 50% sexual maturity (한국 진해만 해역에 분포하는 개조개, Saxidomus purpuratus의 재생산 연구 : 산란 및 군성숙각장)

  • Lee, Sun Kil;Chang, Dae Soo;Kim, Jong Bin;Park, Mi Ae
    • Journal of the Korean Society of Fisheries and Ocean Technology
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    • v.49 no.4
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    • pp.449-458
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    • 2013
  • This study investigated purplish Washington clam, Saxidomus purpuratus on its gonadal development, reproductive cycle and shell length (age) at 50% female group maturity from January to December 2011 in Jinhae Bay, Korea. This species is dioecious. The gonad index (GI) began to increase in January, reached the maximum value in May and to decrease in June, reached the minimum value in September then to increase slowly in October again. The reproductive cycle of the clams can be divided into five successive stages: the early active stage (Ea, from February to March), the late active stage (La, from January to March and October to December), the ripe stage (R, from January to May), the spawning stage (S, from June to December) and the degenerative and inactive stage (Ia, from January to February and November to December). The spawning periods were from June to December and the main spawning periods were from July to October. The shell length at 50% female group maturity (SL50) was estimated to be 63.6 mm, which can be converted as sexual maturity age of 2.2 year.

Survival and Growth of the Purplish Washington Clam, Saxidomus purpuratus Spat Sowed in bottom and intermediate culture (개조개, Saxidomus purpuratus의 중간육성 및 씨뿌림된 치패의 성장과 생존)

  • Jin, Young-Guk;Oh, Bong-Se;Jung, Choon-Koo;Kim, Tae-Ik;Park, Min-Woo
    • The Korean Journal of Malacology
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    • v.27 no.3
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    • pp.199-204
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    • 2011
  • We studied possibility of the sowing culture at the bottom after intermediate culture as a method for raising the survival of the Purplish Washington clam, Saxidomus purpuratus. The pearl net ($35cm(W){\times}35cm(B){\times}20cm(H)$) for S. prupuratus spat during the period of intermediate culture (hanging culture) from April to October in 2010. The pearl net (100 inds./net) was installed at two stations (Namhae and Pohang) being about 3-4 m in water depth. After hanging culture, S. prupuratus spat sowed in the bottom of the Gangjin Bay. The survivals (%) of intermediate culture of this species at Namhae station and Pohang station were 73% and 74%, respectively. Daily growth rate of mean shell length and mean weight in Namhae station were higher than those in Pohang station. After sowing at the bottom of the Gangjin Bay, its survival (%) showed 73.98% in January 2011. These results suggested the possibility of the intermediate culture as hanging culture for raising survival rate of S. prupuratus.