• Title/Summary/Keyword: purine/pyrimidine nucleoside phosphorylase

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Backbone NMR Assignments and Secondary Structure Determination of a Cupin-family Protein YaiE from Escherichia coli

  • Lee, Sung-Hee;Sim, Dae-Won;Kim, Eun-Hee;Kim, Ji-Hun;Won, Hyung-Sik
    • Journal of the Korean Magnetic Resonance Society
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    • v.21 no.2
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    • pp.50-54
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    • 2017
  • Cupin-superfamily proteins represent the most functionally diverse groups of proteins and include a huge number of functionally uncharacterized proteins. Recently, YaiE, a cupin protein from Escherichia coli has been suggested to be involved in a novel activity of pyrimidine/purine nucleoside phosphorylase (PPNP). In the present study, we achieved a complete backbone NMR assignments of YaiE, by a series of heteronuclear multidimensional NMR experiments on its [$^{13}C/^{15}N$]-enriched sample. Subsequently, secondary structure analysis using the assigned chemical shift values identified 10 obvious ${\beta}-strands$ and a tentative $3_{10}-helix$. Taken all together, the results constitute the first structural characterization of a putative PPNP cupin protein.