• Title/Summary/Keyword: pufM

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Source Environment Feature Related Phylogenetic Distribution Pattern of Anoxygenic Photosynthetic Bacteria as Revealed by pufM Analysis

  • Zeng, Yonghui;Jiao, Nianzhi
    • Journal of Microbiology
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    • v.45 no.3
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    • pp.205-212
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    • 2007
  • Anoxygenic photosynthesis, performed primarily by anoxygenic photosynthetic bacteria (APB), has been supposed to arise on Earth more than 3 billion years ago. The long established APB are distributed in almost every corner where light can reach. However, the relationship between APB phylogeny and source environments has been largely unexplored. Here we retrieved the pufM sequences and related source information of 89 pufM containing species from the public database. Phylogenetic analysis revealed that horizontal gene transfer (HGT) most likely occurred within 11 out of a total 21 pufM subgroups, not only among species within the same class but also among species of different phyla or subphyla. A clear source environment feature related phylogenetic distribution pattern was observed, with all species from oxic habitats and those from anoxic habitats clustering into independent subgroups, respectively. HGT among ancient APB and subsequent long term evolution and adaptation to separated niches may have contributed to the coupling of environment and pufM phylogeny.

Functions of PUF Family RNA-Binding Proteins in Aspergillus nidulans

  • Son, Sung-Hun;Jang, Seo-Yeong;Park, Hee-Soo
    • Journal of Microbiology and Biotechnology
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    • v.31 no.5
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    • pp.676-685
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    • 2021
  • RNA-binding proteins are involved in RNA metabolism and posttranscriptional regulation of various fundamental biological processes. The PUF family of RNA-binding proteins is highly conserved in eukaryotes, and its members regulate gene expression, mitochondrial biogenesis, and RNA processing. However, their biological functions in Aspergillus species remain mostly unknown in filamentous fungi. Here we have characterized the puf genes in the model organism Aspergillus nidulans. We generated deletion mutant strains for the five putative puf genes present in the A. nidulans genome and investigated their developmental phenotypes. Deletion of pufA or pufE affected fungal growth and asexual development. pufA mutants exhibited decreased production of asexual spores and reduced mRNA expression of genes regulating asexual development. The pufE deletion reduced colony growth, increased formation of asexual spores, and delayed production of sexual fruiting bodies. In addition, the absence of pufE reduced both sterigmatocystin production and the mRNA levels of genes in the sterigmatocystin cluster. Finally, pufE deletion mutants showed reduced trehalose production and lower resistance to thermal stress. Overall, these results demonstrate that PufA and PufE play roles in the development and sterigmatocystin metabolism in A. nidulans.

Properties of Rigid Polyurethane Foams Synthesized from 4,4 (4,4'-Diphenylmethane Diisocyanate와 Polyether Polyol로부터 제조된 경질 폴리우레탄 폼의 물성)

  • 서원진;정현철;김연희;김우년;최건형
    • Polymer(Korea)
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    • v.26 no.2
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    • pp.185-192
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    • 2002
  • Rigid polyurethane foams (PUFs) were prepared from polymeric 4.4'-diphenyl-methane diisocyanate (PMDI), polyether polyol, 1,4-butane diol, silicone surfactant, and distilled water. The density of the PUF was decreased from 173.7 to 41.7 kg/㎥ with an increase in distilled water from 0.5 to 3.0 php (parts per hundred polyol by weight), respectively, at the 0 php butane diol. The cell size of the PUF increased from 115 to 258 $mu extrm{m}$ with an increase in the amount of distilled water from 0.5 to 3.0 php, respectively, at the 10 php butane diol. It was found that the compressive strength of the PUF increased with the content of distilled water, at the same density. Out of the study for the surfactant effect on the properties of the PUF, it was observed that the cell site of the PUF decreased from 360 to 146 $mu extrm{m}$ with an increase in the amount of the surfactant from 0 to 0.33 php, respectively, but the tell size did not change significantly when the amount of the surfactant exceeded 0.33 php.

A Study on the Development of Secure Communication Channel Using PUF Technology in M-IoT Environment (M-IoT 환경에서 PUF 기술을 활용한 안전한 통신채널 구성 기법)

  • Kim, Sumin;Lee, Soo Jin
    • Convergence Security Journal
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    • v.19 no.5
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    • pp.107-118
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    • 2019
  • Based on the Internet of Things technology, one of the core technologies of the fourth industrial revolution, our Ministry of Defense is also pushing to establish M-IoT in defense area to improve management efficiency, innovate military culture and strengthen military power. However, devices connected to the Military Internet of Things can be easily exposed to various of cyber threats as most of them are developed and with a focus on improving sensing and communication skills that collect and transmit data. And it is not easy to uniquely identify the numerous heterogeneous devices, and to establish a secure communication channel between devices or between devices and management servers. In this paper, based on PUF technology, we propose a novel key management scheme that can uniquely identify the various devices, and generate the secret keys needed for the establishment of a secure communication channel using non-replicable information generated by the PUF. We also analyze the efficiency of our proposed scheme through comparison with existing key management scheme and verify the logic and security using BAN Logic.

Effects of Organoclay on the Thermal Insulating Properties of Rigid Polyurethane Foams Blown by Environmentally Friendly Blowing Agents

  • Kim, Youn-Hee;Choi, Seok-Jin;Kim, Ji-Mun;Han, Mi-Sun;Kim, Woo-Nyon;Bang, Kyu-Tae
    • Macromolecular Research
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    • v.15 no.7
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    • pp.676-681
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    • 2007
  • A process designed to synthesize rigid polyurethane foam (PUF) with insulative properties via the modulation of PUF cell size via the addition of clay and the application of ultrasound was assessed. The blowing agents utilized in this study include water, cyclopentane, and HFC-365mfc, all of which are known to be environmentally-friendly blowing agents. The rigid PUFs were prepared from polymeric 4,4'-diphenylmethane diisocyanate (PMDI) and polyether polyol with a density of $50kg/m^3$. In addition, rigid PUFs/clay nanocomposites were synthesized with clay modified by PMDI with and without the application of ultrasound. The PUF generated using water as a blowing agent evidenced the highest tensile strength. The tensile strength of the PUF/nanocomposites was higher than that of the neat PUF and the strength was even higher with the application of ultrasound. The cell size of the PUF/clay nanocomposites was less than that of the neat PUF, regardless of the type of blowing agent utilized. It appears that the higher tensile strength and lower cell size of the PUF/clay nanocomposites may be attributable to the uniform dispersion of the clay via ultrasonic agitation. The thermal conductivity of the PUF/clay nanocomposites generated with HCFC-141b evidenced the lowest value when PUF/clay nanocomposites were compared with other blowing agents, including HFC-365mfc, cyclopentane, and water. Ultrasound has also proven effective with regard to the reduction of the thermal conductivity of the PUF/clay nanocomposites with any of the blowing agents employed in this study. It has also been suggested that the uniformly dispersed clay particles in the PUF matrix function as diffusion barriers, which prevent the amelioration of the thermal insulation property.

Degradation of Salicylic Acid by Free and Immobilized Cells of Pseudomonas sp. Strain NGK1

  • Patil, Neelakanteshwar-K.;Sharanagouda, U.;Niazi, Javed-H.;Kim, Chi-Kyung;Karegoudar, Timmanagouda-B.
    • Journal of Microbiology and Biotechnology
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    • v.13 no.1
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    • pp.29-34
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    • 2003
  • A Pseudomonas sp. strain NGK1 (NCIM 5120) capable of utilizing salicylate was immobilized in alginate and polyurethane foam (PUF). The degradation rate of salicylate by freely suspended cells was compared with the degradation rate by immobilized cells. In an initial 20 and 40 mM salicylate, free cells ($2{\times}10^{11}\;cfu\;ml^{-1}$) degraded to 16 and 14 mM, alginate-entrapped cells degraded to 18 and 26 mM, and PUF-entrapped cells degraded to 20 and 32 mM salicylate, respectively, in batch cultures. The alginate-and PUF-entrapped cells were used in repeated batch and continuous culture systems. The efficiency of both the immobilized systems f3r the degradation of salicylate was compared. It has been observed that the PUF-entrapped cells could be reused for more than 20 cycles whereas alginate-entrapped cells could be reused for a maximum of only 12 cycles, after which a decrease in degradation rat was observed with the initial 20 and 40 mM salicylate. The continuous degradation of sallcylate by freely suspended cells showed a negligible degradation rate of salicylate when compared with immobilized cells. With the immobilized cells in both alginate and polyurethane foam, the degradation rate increased with an increase in the dilution rate up to $2\;h^{-1}$ for 20 mM, and $1.5\;h^{-1}$ for 40 mM salicylate. The results revealed that PUF-entrapped cells were more efficient for the degradation of salicylate than alginate-entrapped cells and freely suspended cells.

Assessment of Cryogenic Material Properties of R-PUF Used in the CCS of an LNG Carrier

  • Song, Ha-Cheol
    • Journal of Ocean Engineering and Technology
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    • v.36 no.4
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    • pp.217-231
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    • 2022
  • Reinforced polyurethane foam (R-PUF), a material for liquefied natural gas cargo containment systems, is expected to have different mechanical properties depending on its stacking position of foaming as the glass fiber reinforcement of R-PUF sinks inside R-PUF under the influence of gravity. In addition, since R-PUF is not a homogeneous material, it is also expected that the coordinate direction within this material has a great correlation with the mechanical properties. So, this study was conducted to confirm this correlation with the one between the mechanical properties and the stacking position. In particular, in this study, R-PUF of 3 different densities (130, 170, and 210 kg/m3) was used, and tensile, compression, and shear tests of this material were performed under 5 temperatures. As a result of the tests, it was confirmed that the strength and modulus of elasticity of the material increased as the temperature decreased. Specifically, the strength and modulus of elasticity in the Z direction, which was the lamination direction, tended to be lower than those in the other directions. Finally, the strength and elastic modulus of different specimens of the material found at the bottom of their lamination compared to the specimens with these properties found at positions other than their lamination bottom were evaluated. Further analysis confirmed that as the temperature decreased, hardening of R-PUF occurred, indicating that the strength and modulus of elasticity increased. On the other hand, as the density of R-PUF increased, a sharp increase in strength and elastic modulus of R-PUF was observed.

Measurement of Atmospheric PCDD/Fs Concentrations Using Polyurethane Foam Disk Passive Air Samplers (폴리우레탄 폼 수동형 공기시료채취기를 이용한 대기 중 다이옥신/퓨란 농도 측정)

  • Kim, Taewook;Chun, Man-Young
    • Journal of Environmental Health Sciences
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    • v.42 no.2
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    • pp.102-111
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    • 2016
  • Objectives: This study was conducted to evaluate the use of polyurethane foam disk passive air samplers (PUF PAS) for better measurement of atmospheric polychlorinared dibenzo-p-dioxins/furans (PCDD/Fs) concentrations compared to PUF PAS combined with high volume air samplers (HVS). Methods: Air samples were collected by a low volume air sampler (LVS) and PUF PAS. A total of two pairs were continuously collected for six months, but the PUF was replaced every two months. Results: A good correlation was shown ($R^2=0.8595$, p<0.0001) between atmospheric PCDD/Fs concentration measured by the LVS and PUF PAS. The average air sampling rate ($1.5m^3/day-sampler$) of all PCDD/Fs congeners showed a middle of the means which were measured using a HVS by other researchers in different cities. In addition, the air sampling rates of the LVS for each congener made less difference than did those of the HVS. Conclusion: It was found that measurements using the LVS were less influenced by atmospheric peak PCDD/Fs concentrations. However, trace POPs such as PCDD/Fs may involve relatively large analytical errors in measurement, and as a result the air sampling rate of the respective PCDD/Fs isomer is also likely to involve errors. The method of using a regression straight line between the concentrations obtained from the LVS and those from the PUF PAS was judged higher than the method using the air sampling rate, since the former compensated for the experimental errors in the process of evaluation of atmospheric PCDD/F concentrations using the PUF PAS.

Effects of MWCNT Nucleating Agent on the Formation Reaction of Rigid Polyurethane Foams

  • Ahn, WonSool;Lee, Joon-Man
    • Elastomers and Composites
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    • v.50 no.1
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    • pp.13-17
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    • 2015
  • A study of the effects of MWCNT as a nucleating agent on the formation reactions of the rigid polyurethane foams (RPUFs) was carried out. Sample PUFs, formulated with grease-type master batch of MWCNT/surfactant, were fabricated by free-rising method. Temperature changes with time during foaming process were measured using a digital thermometer. RPUF foaming process was observed to undergo 2-step processes with temperature inflection around 60 sec after the start of reaction, and then reached slowly the max. temperature. While the max. temperature of neat PUF was measured as ca. $120^{\circ}C$, that of the samples with MWCNT were as higher value as ca. $130^{\circ}C$, and, even the time to reach that temperature was reduced by about 15 sec. Average cell size of PUF samples decreased from 185.1 for the neat PUF to $162.9{\mu}m$ for the sample of 0.01 phr of MWCNT. As the result, it was considered that MWCNT in RPUF foaming process could play a roll both as a nucleating agent and as a catalyst.

Design of Security Protocal for Mobility Memory Secunity Using PUF (이동성 메모리 보안을 위한 PUF을 이용한 보안 시스템 프로토콜 설계)

  • Jung, Young-Min;Park, Seok-Cheon
    • Proceedings of the Korea Information Processing Society Conference
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    • 2013.11a
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    • pp.625-628
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    • 2013
  • 기술이 발달함에 따라 USB메모리, 보안 SD카드, 보안인증토큰 등 이동형 저장 매체도 비약적인 발전을 하고 있다. USB의 가격이 저렴해지고 작아지면서 용량의 확장도 증가하여 다양한 이용을 할 수 있게 되었다. 하지만 분실율이 높고 보안성이 낮아 다수의 사용자에게 중요한 회사의 기밀이나 개인의 인적 사항들이 노출 될 수 있다. 이를 위해 PUF를 이용하여 플래시 메모리 마다 고유키를 저장, 생성하여 외부 유출이 없이 사용자 인증을 하기 위한 플래시 드라이버의 구조 및 프로토콜을 제안하고자 한다.