• Title/Summary/Keyword: pseudomonas

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Phylogeneitc Analysis of Fluorescent Pseudomonas spp. Isolated from the Cultivated Mushrooms on the Basis of ITS I Region (버섯에서 분리한 형광성 Pseudomonas spp. 의 ITS I 영역 분석에 의한 계통 분류)

  • 고승주;고승주;강희완;전명숙;류진창
    • Korean Journal Plant Pathology
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    • v.14 no.4
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    • pp.350-357
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    • 1998
  • A total of 12 strains of fluorescent Pseudomonas isolated from the cultivated mushrooms such as Agaricus bisporus and Pleurotus ostreatus were collected. They consisted of pathogenic Pseudomonas spp. and epiphytic Pseudomonas spp. of the cultivated mushroom. To analyze the phylogenetic relationship of these strains, ITS I region, the 16S-23S intergenic spacer region in the ribosomal RNA (rRNA) operon, was cloned and sequenced. The spacer regions of these strains were 495∼527 nucleotides in length and contained the genes encoding isoleucine-tRNA (tRNAIle) and alanine-tRNA (tRNAAla). The reciprocal homologies of each ITS I sequence among these strains were in the range of 84.2%∼98.8%. According to the analysis of ITS I sequences, the fluorescent Pseudomonas spp. were phylogenetically classified into three clusters. Cluster I consisted of Pseudomonas fluorescens, P. tolaasii, P. gingeri’, and P.‘reactans’(WLRO). Cluster II comprised Pseudomonas fluorescens biovar C and F. Cluster III composed P. agarici. Cluster I and II could be classified into P. fluorescens complex. P. agarici formed an independent taxon clearly separable from P. florescens complex.

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Cloning and Sequence Analysis of the xyIL Gene Responsible for 4CBA-Dihydrodiol Dehydrogenase from Pseudomonas sp. S-47

  • 박동우;이상만;가종옥;김지경
    • Korean Journal of Microbiology
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    • v.38 no.4
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    • pp.275-275
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    • 2002
  • Pseudomonas sp. S-47 is capable of catabolizing 4-chlorobenzoate (4CBA) as carbon and energy sources under aerobic conditions via the mesa-cleavage pathway. 4CBA-dioxygenase and 4CBA-dihydrodiol dehydrogenase (4CBA-DD) catalyzed the degradation af 4CBA to produce 4-chlorocatechol in the pathway. In this study, the xylL gene encoding 4CBA-DD was cloned from the chromosomal DNA of Pseudomonas sp. S-47 and its nucleotide sequence was analyzed. The xylL gene was found to be composed of 777 nucleotide pairs and to encode a polypeptide of 28 kDa with 258 amino acid residues. The deduced amino acid sequence of the dehydrogenase (XylL) from strain S-47 exhibited 98% and 60% homologies with these of the corresponding enzymes, Pseudomonas putida mt-2 (XyIL) and Acinetobacter calcoaceticus (BenD), respectively. However, the amino arid sequences show 30% or less homology with those of Pseudomonas putida (BnzE), Pseudomonas putida Fl (TodD), Pseudomonas pseudoalcaligenes KF707 (BphB), and Pseudomonas sp. C18 (NahB). Therefore, the 4CBA-dihydrodiol dehdrogenase of strain S-47 belongs to the group I dehydrogenase involved in the degradation of mono-aryls with a carboxyl group.

Isolation and Characterization of Denitrification Bacteria (탈질 세균의 분리 및 특성)

  • 차월석;최형일;이동병;차진명
    • KSBB Journal
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    • v.18 no.6
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    • pp.461-465
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    • 2003
  • Five denitrifying bacteria, which were identified as Pseudomonas sp., were isolated by the enrichment culture technique. The most effective denitrifying bacterium was named as Pseudomonas DWS, which was cultivated at anoxic condition. The optimal growth temperature and pH were 30$^{\circ}C$ and 7-8, respectively. Cell growth almost revealed a stationary phase at 18 hours after cultivation and nitrate was degrade 99.9% during this period. Therefore, it is suggested that Pseudomonas DWS could be effectively used for the biological treatment of wastewater containing nitrogen compounds.

Isolation and Characterization of High Viscosity Polysaccharide Producing Endophytic Bacteria from Pueraria Root (고점도 다당류를 생산하는 갈근 내생균의 분리 및 특성)

  • Whang, Kyung-Sook;Choi, Seung-Hyun;Han, Song-Ih
    • Korean Journal of Microbiology
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    • v.43 no.4
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    • pp.341-345
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    • 2007
  • Fifty endophytic bacteria, which produced slime around the colonies, were isolated from Pueraria roots. In particular, HDN-14, TDG-3, and TNB-3 strains, which appeared to be high viscosity producers, were selected. These strains produced high levels of polysaccharides in Puerara root medium extract. The purified polysaccharide was digested with 1N HCI and analyzed by HPLC, with glucose ($45.6{\sim}63.1%$), maltose ($14.6{\sim}23.7%$), and fructose ($17.4{\sim}23.7%$) detected as constitutive sugars. When determined by the homology relationship of the 16S rDNA sequence with the relative taxa, the HDN-14 and TNB-3 strains were closely ($99.06{\sim}99.32%$) related to the Pseudomonas $koreensis^T$ and Pseudomonas $jessenii^T$, while TDG-3 were closely ($99.48{\sim}99.74%$) related to Pseudomonas $plecoglossicida^T$, Pseudomonas $mosselii^T$, and Pseudomonas $monteilii^T$. The major cellular Pseudomonas acids are $3OH-C_{10:0}$, $2OH-C_{12:0}$, $3OH-C_{12:0}$, and $3OH-C_{12:1}$, with these strains being further differentiated in species belonging to the genus Pseudomonas.

Production of Exoenzyme of Pseudomonas aeruginosa and Susceptibility to Antimicrobial Agents (녹농균의 Exoenzyme 산생능 및 임상검체별로 본 항균제 감수성)

  • Choi, Byung-Zoo;Cho, Yang-Ja
    • The Journal of the Korean Society for Microbiology
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    • v.16 no.1
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    • pp.19-28
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    • 1981
  • The Pseudomonas infection has been increased in incidence and suspected as a cause of opportunistic pathogen. Protease and elastase produced by Pseudomonas aeruginosa are reported to be closely associated with pathogenicity of Pseudomonas aeruginosa. We examined, in this work, the relationship between production of exoenzyme of Pseudomonas aeruginosa and susceptibility to antimicrobial agents in view of possible application to the management of Pseudomonas infection. 1. In 295 Pseudomonas aeruginosa isolated from clinical specimens, 34.6% were from pus, 20.7% from sputum, 15.6% from wound including burn sites and 12.9% from urine. 2. Distribution of protease and elastase production by clinically isolated Pseudomonas aeruginosa, showed that protease and elastase producing strains were 83.1%, protease producing strains were 7.5%, elastase producing strains were 2.0%, and non producing strains were 7.5%. 3. MIC(minimum inhibitory concentration) peak for tetracycline and chloramphenicol were observed at 25mcg/ml and 200mcg/ml respectively, but there were no Pseudomonas aeruginosa which correspond to MIC peak, 6.25mcg/ml. Gentamicin of aminoglycosides was highly susceptible to Pseudomonas aeruginosa clinically isolated from pus, sputum and wound sites, but susceptible to isolates from nasal discharge and urine. Regarding MIC peak of carbenicillin, 100mcg/ml, 81.8% of Pseudomonas aeruginosa were from urine, 54.8% from wound including burn sites, 52.7% from pus, and 50.8% from sputum. 4. Enzyme producing strains showed no susceptibility to kanamycine and carbenicillin at low concentration, but protease producing strains tend to resistant to antimicrobial agents.

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Effect of Cosubstrate on tile Production of Poly(3-Hydroxybutyric-Co-3-Hydroxyvaleric) Acid from Glucose by Pseudomonas sp, HJ (Pseudomonas sp. HJ에 의한 포도당으로부터 Poly(3-Hydroxybutyric-Co-3-Hydroxyvaleric) Acid의 생합성에 대한 보조기질의 영향)

  • 손홍주;고명선이상준
    • KSBB Journal
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    • v.11 no.5
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    • pp.586-592
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    • 1996
  • Poly(3-hydroxybutyric-co-3-hydroxyvaleric) acid(PHB/HV) copolymer synthesis by Pseudomonas sp. HJ from glucose and cosubstrate was investigated. Taxonomic analysis suggested that Pseudomonas sp. HJ was best marched to Pseudomonas picketti having 78.8% similarity. Pseudomonas sp. HJ produced PHB/HV copolymer containing 60.8 mol% HV and 44.9 mol% HV when supplied with hexadecane and propionic acid as a cosubstrate, respectively. The HV composition in PHB/HV copolymer was controlled by varying the concentration of hexadecane and propionic acid. Propionic acid added after 24 hours of incubation was incorporated as the HV monomer in the PHB/HV copolymer up to 49.6 mol%.

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Selection and Antagonistic Mechanism of Pseudomonas fluorescens 4059 Against Phytophthora Blight Disease (고추역병과 시들음병을 방제하는 토착길항세균 Pseudomonas fluorescens 4059의 선발과 길항기작)

  • Jeong, Hui-Gyeong;Kim, Sang-Dal
    • Microbiology and Biotechnology Letters
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    • v.32 no.4
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    • pp.312-316
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    • 2004
  • In oder to select the powerful rhizophere-dorminatable biocontrol agent, we had isolated an indigenous antagonistic bacterium which produced antibiotic and siderophore from a disease suppressive local field soil of Gyungsan, Korea. And we could select the Pseudomosp. 4059 which can strongly antagonize against Fusarium oxysporum and Phytophthora capsici by two kinds of antifungal mechanism that can be caused by the antibiotic of Phenazin, a siderophore and a auxin like subThe selected strain was identified as Pseudomonas fluorescens (biotype A) 4059 by biochemical tests, API $\textregistered$ test, MicroLog TM system and 16S rDNA analysis. The selected antagonistic microorganism, Pseudomosp. 4059 had an antifungal mechanism of antifungal antibiotic and sidrophore. And we were confirmed the antagonistic activity of P fluorescens 4059 with in vitro antifungal test against Phytophthora capsici and in vivo by red-pepper.

Characteristics of Biosurfactant Producing Pseudomonas sp. G314 (생물 계면활성제를 생산하는 Pseudomonas sp. G314의 특성)

  • Shim, So-Hee;Park, Kyeong-Ryang
    • Korean Journal of Microbiology
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    • v.42 no.4
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    • pp.286-293
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    • 2006
  • Three hundred thirty two bacterial colonies which were able to degrade crude oil were isolated from soil samples that were contaminated with oil in Daejon area. Among them, one bacterial strain was selected for this study based on its low surface tension ability, and this selected bacterial strain was identified as Pseudomonas sp. G314 through physiological-biochemical tests and analysis of its 16S rRNA sequence. Pseudomonas sp. G314 showed a high resistance to antibiotics such as ampicillin, chloramphenicol, spectinomycin, and streptomycin, and heavy metals such as Li, Cr, and Mn. It was found that the optimal pH and temperature for biosurfactant production of Pseudomonas sp. G314 were pH 7.0 and $30^{\circ}C$, respectively. After seven hours of inoculated, the biosurfactant activity reached the maximum, and surface tension of the culture broth was decreased from 72 to 25 dyne/cm. The crude biosurfactant was obtained from the culture broth by acid precipitation, followed by solvent extraction, evaporation and then freeze drying. The CMC (critical micelle concentration) value of the crude biosurfactant was 20 mg/L.

Characteristics of Cadmium Accumulating Mutant, Pseudomonas maltophilia H-8M (카드뮴 축적 변이주인 Pseudomonas maltophilia H-8M의 특성)

  • Ryu, Beung-Ho;Rho, Myung-Hoon;Jung, Su-Ja;Bae, Ki-Chul
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.21 no.1
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    • pp.70-75
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    • 1992
  • This study was carried out to investigate the characteristics of a mutant, Pseudomonas maltophilia H-8M selected with the treatment of Pseudomonas maltophilia H-8 by N-methyl-N-nitro-N-nitrosoguanidine(MNNG). This mutant showed highest ability of cadmium accumulation. The growth rate of Pseudomonas maltophilia H-8M showed about 80% in 1000ppm Cd containing medium when compare with control for 36h at $30^{\circ}C$. Pseudomonas maltophilia H-8M not inhibited on the growth in addition of various heavy metal such as $Hg^{2+}$, $Zn^{2+}$, $Pb^{2+}$, $Cu^{2+}$, $Cr^{2+}$ and $Co^{2+}$, but inhibited in $Sn^{2+}$ containing medium, respectively. Pseudomonas maltophilia H-8M was accumulated the highest cadmium level of 62.3% on whole cell in the medium containing 50 ppm and 80% of accumulated cadmium was distributed in the cell wall.

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Isolation and Characteristics of Polyhydroxyalkanoates Producing Pseudomonas sp. MBEL21 (신규 Pseudomonas sp. MBEL21 균주의 Polyhydroxyalkanoates 생산 특성)

  • 최종일;이승환;이상엽
    • Microbiology and Biotechnology Letters
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    • v.32 no.2
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    • pp.123-127
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    • 2004
  • Pseudomonas sp. MBEL21 was newly isolated from soil samples and found to accumulate medium-chain-length Polyhydroxyalkanoates(MCL-PHAs) using oleic acid as a sole carbon source. Among the various nutrient limiting conditions examined, including nitrogen, sulfur and phosphorus, only phosphorus limitation supported the accumulation of MCL-PHAs up to 15 wt% of dry cell weight in flask cultures. MCL-PHAs produced by Pseudomonas sp. MBEL21 was mainly composed of 3-hydroxy-5-cis-tetradecenoate. Fed-batch culture of Pseudomonas sp. MBEL21 by novel feeding strategies based on cell growth charcteristics was carried out under phosphorus limitation using oleic acid as a sole carbon source. The final cell concentration and PHA content of 82 g/L and 28 wt%, respectively, were obtained. Furthermore, PHA consisted of MCL-hydroxyalkanoates and 3-hydroxybutyrate could be produced using olive oil as a sole carbon source.