• Fisheries and Aquatic Sciences
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• 제3권2호
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• pp.118-125
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• 2000

Lipid classes and fatty acid compositions of eight species of wild and cultured seawater fish in Korea were investigated. Total lipid (TL) contents of wild and cultured fish were $2.64\pm1.88\%$ and $5.42\pm1.76\%$, respectively, except for rockfish and striped beakperch. Non-polar lipids (NL) in all fish samples comprised approximately $84\%$ of the TL content. The proportion equation of NL content to TL content was y=0.9296x-0.4468 $(R^2=0.98l2, p<0.001)$. The most abundant NL class was triglyceride. The prominent fatty acids in all fish samples were 16: 0, 18: 1(n-9), 22 : 6(n-3) (docosahexaenoic acid, DHA), 16: 1(n-7), 20 : 5 (n-3) (eicosapentaenoic acid, EPA), 18 : 0 and 18 : 1(n-7). The polyunsaturated fatty acid (PUFA) group was the richest among the total fatty acids (TFA). DHA and EPA were comprised of approximately $85\%$ of n-3 PUFA. There was a positive correlation between TFA content and n-3 PUFA content; y=0.292x-0.0055 $(R^2=0.9349, p<0.001)$. The n-3 PUFA content of the cultured fish was approximately twice as much as that of the wild fish. Therefore, cultured fish were proven to provide better sources of n-3 PUFA if compared to wild fish.

• Ocean and Polar Research
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• 제36권3호
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• pp.209-223
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• 2014

The community structure of benthic meiofauna was investigated from seasonal surveys at seventeen stations off the Saemangeum area, in 2007. Ten meiofaunal taxa were identified. Nematodes were the dominant faunal group in all seasons and harpacticoids were dominant only at a few stations. The mean density of meiofauna was 383 indiv. $10cm^{-2}$, highest in May and November (434 indiv. $10cm^{-2}$), lowest in February (284 indiv. $10cm^{-2}$). Meiofaunal mean biomass was $80.49{\mu}gC{\cdot}10cm^{-2}$, highest in November ($99.54{\mu}gC{\cdot}10cm^{-2}$), lowest in February ($51.56{\mu}gC{\cdot}10cm^{-2}$). Cluster analysis revealed that the study area was composed of three benthic meiofaunal communities. There were significant correlations between major meiofaunal groups and sediment composition and the concentrations of heavy metals. The abundance of harpacticoids are positively correlated with silt (0.559, p < 0.01) and clay (0.340, p < 0.01), and negatively correlated with sand (-0.548, p < 0.01). Harpacticoids also showed positive correlations with heavy metals. The community structure of meiofauna in the study area varied seasonally in response to the change of sediment composition.

• Ocean and Polar Research
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• 제40권3호
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• pp.127-143
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• 2018

This study analyzed the influence of climate change on the spawning ground area of the common squid, Todarodes pacificus. To estimate long term changes in the area of the spawning ground of the common squid, water temperature at 50 m deep that can be inferred from sea surface temperature (SST) based on both NOAA/AVHRR (1981.07-2002.12) and MODIS/AQUA (2003.01-2009.12) ocean color data was analyzed. In addition, five climate indices, Arctic Oscillation Index (AO), Siberian High Index (SH), Aleutian Low Pressure Index (ALP), East Asia Winter Monsoon Index (EAWM) and Pacific Decadal Oscillation (PDO) which are the main indicators of climate changes in the northwestern Pacific were used to study the relationship between the magnitude of the estimated spawning ground and climate indices. The area of the estimated spawning ground was highly correlated with the total catch of common squid throughout four decades. The area of the estimated spawning ground was negatively correlated with SH and EAWM. Especially, PDO was negatively correlated with the area of the spawning ground in the northwestern Pacific (r = -0.39) and in the southern part of the East Sea (r = -0.38). There was a positive relationship between the AO and the area of the spawning ground in the northwestern Pacific (r = 0.46) as well as in the southern part of the East Sea (r = 0.32). Temporally, the area of the winter spawning ground in the southern part of the East Sea in the 1980s was smaller than those areas in the 1990s and 2000s, because the area was disconnected with the western coastal spawning ground of Japan in the 1980s, while the area had been made wider and more continuous from the Korea strait to the western coastal water of Honshu in the 1990s and 2000s.

• 한국미생물생명공학회:학술대회논문집
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• 한국미생물생명공학회 2001년도 Proceedings of 2001 International Symposium
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• pp.35-39
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• 2001

The Integration Host factor (IHF) of Escherichia coli is a small, basic protein that is required for a variety of functions including site-specific recombination, transposition, gene regulation, plasmid replication, and DNA packaging. It ,is composed of two subunits that are encoded by the ihfA ($\alpha$-subunit) and ihjB ($\beta$-subunit) genes. IHF binding sites are composed of three elements called the WATCAR, TTG, and poly (dAT) elements. We have characterized IHF binding to the H site of bacteriophage λ. We have isolated suppressors that bind to altered H' sites using a challenge phage selection. Two different suppressors were isolated that changed the adjacent $\alpha$P64 and $\alpha$K65 residues. The suppressors recognized both the wild-type site and a site with a change in the WATCAR element. Three suppressors were isolated at $\beta$-E44. These suppressors bound the wild-type and a mutant site with a T：A to A：T change (H44A) in the middle of the TIR element. Site-directed mutagenesis was used to make several additional changes at $\beta$E44. The wild-type and $\beta$E44D mutant could not bind the wild-type site but were able to bind the H44A mutant site. Other mutants with neutral, polar, or a positive charge at $\beta$E44 were able to repress both the wild-type and H44A sites. Examination of the IHF crystal structure suggests that the ability of the wild-type and $\beta$E44D proteins to discriminate between the T：A and A：T basepairs is due to indirect interactions. The $\beta$-E44 residue does not contact the DNA directly. It imposes binding specificity indirectly by interactions with residues that contact the DNA. Details of the proposed interactions are discussed.

• 대기
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• 제30권3호
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• pp.221-236
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• 2020

The Gangneung region has the complicated geographical characteristics being adjacent to East Sea and Taeback mountains, and thus sea breeze could play an important role in local weather in various aspects. This study aims to understand overall characteristics of sea breeze largely based on long-term (2009~2018) ground-based observation data. We also propose a selection criteria of sea breeze occurrence day; 1) daily precipitation is less than 10 mm, 2) surface wind direction is 0~110° (northerly to easterly) for more than 3 hours during the daytime, 3) wind direction is 110~360° for more than 3 hours during the nighttime, and 4) land and sea temperature difference is positive during the daytime, 5) sea and land sea-level pressure difference is more than 0.5 hPa. As a result, a total of 595 days was selected for the past 10 years. The occurrence of sea breeze is the highest in late Spring to early Summer (May to June). The passage time of sea breeze at the inland station (1.6 km farther inland) is one hour later than the coastal station. On the typical sea breeze event of April 12, 2019, the passage speed and duration of sea breeze was 15 km hr^-1 and about 9 hours, respectively, with its depth of about 500 m and its head swelling. The current results emphasize the critical role of sea breeze in forecasting surface temperature and wind, and contribute to relieve heat wave especially in summer in the Yeongdong region.

• Bulletin of the Korean Chemical Society
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• 제34권11호
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• pp.3284-3288
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• 2013

This paper describes first development and validation of pentafluorophenylprophyl ligand-based liquid chromatography coupled to tandem mass spectrometry (PFPLC-MS/MS) method to determine metformin, a highly polar compound, in human plasma. Metformin and Phenformin (internal standard) were extracted from human plasma 50 ${\mu}L$ with a single-step protein precipitation. The chromatographic separation was performed using a linear gradient elution of mobile phase involving 5.0 mM ammonium formate solution with 0.1% formic acid (A) and acetonitrile (B) over 3.0 min of run time on a Phenomenex Luna PFP column. The detection was performed using a triple-quadrupole tandem mass spectrometer (Waters Quattro micro) with electrospray ionization in the mode of positive ionization and multiple-reaction monitoring (MRM). The developed method was validated with 5.0 ng/mL of lower limit of quantification (LLOQ). The calibration curve was linear over 5-3000 ng/mL of the concentration range ($R^2$ > 0.99). The specificity, selectivity, carry-over effect, precision, accuracy and stability of the method met the acceptance criteria. The method developed in this study had had rapidness, simplicity and ruggedness. The reliable method was successfully applied to high throughput analysis of real samples for a practical purpose of a pharmacokinetic study.

• 대기
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• 제16권2호
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• pp.111-124
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• 2006

This study examines seasonal variability of the surface energy balance at the King Sejong Station, Antarctica, using measurements and estimates of the components related to the balance for the period of 1996 to 2004. Annual average of downward shortwave radiation at the surface is 81 $Wm^{-2}$ which is 37% of the extraterrestrial value, with the monthly maximum of 188 $Wm^{-2}$ in December and the minimum of 8 $Wm^{-2}$ in June. These values are relatively smaller than those at other stations in Antarctica, which can be attributed to higher cloudy weather conditions in Antarctic front zone. Surface albedo varies between ~0.3 in the austral summer season and ~0.6 in the winter season. As a result, the net shortwave radiation ranges from 117 $Wm^{-2}$ down to 3 $Wm^{-2}$ with annual averages of 43 $Wm^{-2}$. Annual average of the downward longwave radiation shows 278 $Wm^{-2}$, ranging from 263 $Wm^{-2}$ in August to 298 $Wm^{-2}$ in January. The downward longwave radiation is verified to be dependent strongly on the air temperature and specific humidity, accounting for 74% and 79% of the total variance in the longwave radiation, respectively. The net longwave radiation varies between 25 $Wm^{-2}$ and 40 $Wm^{-2}$ with the annual averages of 30 $Wm^{-2}$. Accordingly, the annual average energy balance is dominated by radiative warming of a positive net all-wave radiation from September to next March and radiative cooling of a negative net all-wave radiation from April to August. The net all-wave radiative energy gain and loss at the surface is mostly balanced by turbulent flux of sensible and latent heat. The soil heat flux is of negligible importance in the surface energy balance.

• Ocean and Polar Research
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• 제40권2호
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• pp.77-85
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• 2018

We observed the concentrations of Dissolved Organic Carbon (DOC) and Colored Dissolved Organic Matter (CDOM) in coastal seawater and groundwater around a volcanic island, Jeju, Korea. The sampling of surface seawater and coastal groundwater was conducted in Woljeongri, Pyoseon, and Kwakgi beaches, in three sampling campaigns (June, July, and October 2016). The concentrations of DOC in groundwater were relatively higher in June and October than in July. Salinity and DOC concentrations in the coastal groundwater of Woljeongri and Pyoseon beaches did not show a marked relationship, whereas those in Kwakgi beach showed a good positive correlation (July: $R^2=0.64$, P < 0.01; October: $R^2=0.95$, P < 0.01). In addition, the concentrations of CDOM (C and M peaks) in the groundwater of Woljeongri and Pyoseon beaches, where saline groundwater discharge dominates, were relatively higher than those of Kwakgi beach, where fresh groundwater discharge dominates. The relatively higher DOC concentrations in the coastal groundwater of Woljeongri and Pyoseon, with higher CDOM concentrations, seem to be mainly from anthropogenic sources such as local pollution sources (i.e., aquaculture wastewater or domestic sewage). In order to understand the behavior of DOC in the coastal groundwater of a volcanic island, extensive studies are necessary in the future over a larger-area and greater time-scales using various isotopic tracers.

• Journal of Microbiology and Biotechnology
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• 제22권12호
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• pp.1621-1628
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• 2012

The agar-degrading bacterium GNUM-1 was isolated from the brown algal species Sargassum serratifolium, which was obtained from the West Sea of Korea, by using the selective artificial seawater agar plate. The cells were Gram-negative, $0.5-0.6{\mu}m$ wide and $2.0-2.5{\mu}m$ long curved rods with a single polar flagellum, forming nonpigmented, circular, smooth colonies. Cells grew at $20^{\circ}C-37^{\circ}C$, between pH 5.0 and 9.0, and at 1-10% (w/v) NaCl. The DNA G+C content of the GNUM-1 strain was 45.5 mol%. The 16S rRNA sequence of the GNUM-1 was very similar to those of Alteromonas stellipolaris LMG 21861 (99.86% sequence homology) and Alteromonas addita $R10SW13^T$(99.64% sequence homology), which led us to assign it to the genus Alteromonas. It showed positive activities for agarase, amylase, gelatinase, alkaline phosphatase, esterase (C8), lipase (C14), leucine arylamidase, valine arylamidase, ${\alpha}$-chymotrypsin, acid phosphatase, naphthol-AS-BI-phosphohydrolase, ${\alpha}$-galactosidase, ${\beta}$-galactosidase, ${\beta}$-glucosidase, catalase, and urease. It can utilize citrate, malic acid, and trisodium citrate. The major fatty acids were summed feature 3 (21.5%, comprising $C_{16:1}{\omega}7c/iso-C_{15:0}$ 2-OH) and C16:0 (15.04%). On the basis of the variations in many biochemical characteristics, GNUM-1 was considered as unique and thus was named Alteromonas sp. GNUM-1. It produced the highest agarase activity in modified ASW medium containing 0.4% sucrose, but lower activity in rich media despite superior growth, implying that agarase production is tightly regulated and repressed in a rich nutrient condition. The 30 kDa protein with agarase activity was identified by zymography, and this report serves as the very first account of such a protein in the genus Alteromonas.

• 동의생리병리학회지
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• 제20권5호
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• pp.1321-1326
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• 2006

Total ginsenosides were purified and their antioxidant, antibacterial and anticancer activities were measured. The crude extracts of ginseng, which were extracted with 75% ethanol by ultrasonification method, were firstly purified on AB-8 macroporous adsorption column to remove water soluble impurities, and decolored on Amberlite IRA 900 Cl anion-exchange column. Then, they were purified on Amberlite XAD16 adsorption column to delete the non-polar impurities. Total ginsenosides contents of the purified extracts were 79.4%, 71.7% and 72.5% in cultured wild ginseng, red ginseng and white ginseng, which were significantly increased than those of crude extracts. All of the three extracts showed concentration-dependant scavenging activities against DPPH radicals, among which white ginseng showed the most powerful activity. Cultured wild ginseng roots showed strongest effect against both B. subtilis PM 125(Gram-positive) and E. coli D31 (Gram-negative) bacteria, while red ginseng and white ginseng only showed the activity against B. subtilis. According to the result of the MTT assay, ail of the three extracts inhibited the growth of U-937 human hohistiocytic lympma cell, which were significantly different (p < 0.05) when compared to the control.