• Title/Summary/Keyword: population biology

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Genetic structure and population differentiation of endangered Scrophularia takesimensis (Scrophulariaceae) in Ulleung Island, Korea

  • Ma, Sunmi;Lim, Yongseok;Na, Sungtae;Lee, Jun;Shin, Hyunchur
    • Korean Journal of Plant Taxonomy
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    • v.41 no.3
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    • pp.182-193
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    • 2011
  • As a part of the on-going effort to conserve endangered Scrophularia takesimensis Nakai in Korea, its genetic structure and diversity from 3 population, consisted of 14 subpopulations in Ulleung Island were analyzed using RAPD band patterns. Out of 60 primers tested, 33 generated amplified bands with its genome, including 149 polymorphic and 67 monomorphic bands. The highest number (146) was found in northern population, especially, 64 in HY subpopulation; the smallest (40) in eastern population. An examination of its genetic structure with AMOVA revealed that about 60% of all variations could be assigned to among subpopulations within populations. Population differentiation among populations and subpopulations is seriously going now because of habitat fragmentation due to human activities, such as road and small port construction. Although the habitats of S. takesimensis in Ulleung Island, Korea are disappeared at an alarming rate, significant levels of genetic variation still exist at species level, and population level, especially northern population. Therefore, three conservation strategies should be needed urgently; 1) preservation of populations as it stands, 2) establishment of recovery plan to connect population and subpopulations genetically, and 3) long-term monitoring.

Comparative Studies on Genetic Variabilities of Second Chromosomes in Sasang Natural and Experimental Populations of Drosophila melanogaster (자연과 실험집단내 Drosophila melanogaster 제 2 염색체의 유전적 변이성에 대한 비교 연구)

  • Son, Seong-Gon;Choe, Yeong-Hyeon;Lee, Won-Ho
    • Journal of Environmental Science International
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    • v.3 no.4
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    • pp.297-304
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    • 1994
  • The genetic variabilities of second chromosomes concealed Sasang natural and experimental populations of Drosophila melanogaster have been analyzed. The experimental population was composed of D. melanognter which had the lethal-free second chromosome collected from Sasang natural population in 1982. The results were as follow; The mean frequencies of deleterious genes were estimated % be 33.33% in Sasang natural population and 31.72% in experimental population. The allelism rates in lethal genes isolated from the natural and experimental populations were calculated to be about 0.95% and 12.28%, respectively. The allelism rates between lethal genes isolated from the natural population and those of the experimental population were calculated to be about 0.01%. The mean values of elimination by frequencies of deleterious genes and allelism rates were 0.0011 in the natural population and 0.0124 in the experimental population. The frequencies of phenotypic sterility of males in the natural and experimental populations were estimated to be 1.49% and 1.36%, respectively. The frequencies of genotypic sterility of females and males were estimated to be 0.90% and 1.80% in the natural population, and that of males was 2.38% in the experimental population.

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Genetic Characteristics of 207 Microsatellite Markers in the Korean Population and in other Asian Populations

  • Choi, Su-Jin;Song, Hye-Kyung;Jeong, Jae-Hwan;Jeon, In-Ho;Yoon, Ho-Sung;Chung, Ki Wha;Won, Yong-Jin;Choi, Je-Yong;Kim, Un-Kyung
    • Molecules and Cells
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    • v.25 no.2
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    • pp.301-304
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    • 2008
  • Microsatellites, short tandem repeats, are useful markers for genetic analysis because of their high frequency of occurrence over the genome, high information content due to variable repeat lengths, and ease of typing. To establish a panel of microsatellite markers useful for genetic studies of the Korean population, the allele frequencies and heterozygosities of 207 microsatellite markers in 119 unrelated Korean, Indian and Pakistani individuals were compared. The average heterozygosity of the Korean population was 0.71, similar to that of the Indian and Pakistani populations. More than 80% of the markers showed heterozygosity of over 0.6 and were valuable as genetic markers for genome-wide screening for disease susceptibility loci in these populations. To identify the allelic distributions of the multilocus genetic data from these microsatellite markers, the population structures were assessed by clustering. These markers supported, with the most probability, three clustering groups corresponding to the three geographical populations. When we assumed only two hypothetical clusters (K), the Korean population was separate from the others, suggesting a relatively deep divergence of the Korean population. The present 207 microsatellite markers appear to reflect the historical and geographical origins of the different populations as well as displaying a similar degree of variation to that seen in previously published genetic data. Thus, these markers will be useful as a reference for human genetic studies on Asians.

Population Biology of Korean Pomfret Pampus echinogaster (Basilewsky, 1855) (Perciformes: Stromateidae) on the Western Coast of Korea, Yellow Sea

  • Oh, Chul-Woong;Na, Jong-Hun;Kim, Jin-Koo
    • Animal cells and systems
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    • v.13 no.1
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    • pp.83-89
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    • 2009
  • Investigations were made on population biology of Pampus echinogaster (Basilewsky, 1855) in the coastal areas of Korea, Yellow Sea, between August 2005 and July 2006. Population structure was not significantly different between male and females. Monthly variation of gonadosomatic index (GSI) of both sexes defined spawning period extending from March through July. A similar pattern was also observed in change at maturity stages. For males and females GSI was positively correlated with hepatosomatic index (HSI). Fecundity, ranging from 41,250 to 103,610 eggs, was related to body size, indicating that body size is the useful determinant of fecundity. The sexual maturity ($L_{50}$) was estimated as 14.98 cm TL for males and 19.32 cm TL for females. Parameters of growth estimated by the modified von Bertalanffy growth function model showed that the values of $L_{\infty}$ and K for combined data were 39.12 cm TL and 0.65 $yr^{-1}$. The growth performance index of this study (2.75) was higher than that of the previous study (2.45). This difference could be attributed to sampling method. The recruitment patterns indicated one normally distributed group. Percentage of the recruitment was 51.04% in the spawning season and the highest in August (19.78%).

Genetic variation of COI gene of the Korean medicinal centipede Scolopendra mutilans Koch, 1878 (Scolopendromorpha: Scolopendridae)

  • HAN, Taeman;LEE, Young Bo;KIM, Seung-Hyun;YOON, Hyung Joo;PARK, In Gyun;PARK, Haechul
    • Entomological Research
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    • v.48 no.6
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    • pp.559-566
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    • 2018
  • In Korea, the centipede called "Wang-ji-ne" or "O-gong" is used as an important medicinal resource. This centipede has been known as Scolopendra subspinipes mutilans Koch 1878. Recent studies have assessed its taxonomic treatment in several geographical populations from China, Japan and Taiwan, but not Korea. We therefore attempted to assess exact species status for the Korean population of this subspecies using both morphological and DNA barcode methods. The result inferred from DNA barcoding showed that the Korean population is S. mutilans explicitly separated from S. subspinipes. Within S. mutilans, the Korean population is morphologically identical and genetically closer to the Chinese population rather than island populations of Japan and Taiwan. Particularly, the mainland populations from Korea and China share six haplotypes from 17 despite being far apart geographically.

Current taxonomic status of Eurema mandarina (Pieridae: Lepidoptera) in Korea

  • Kim, Sung-Soo;Choi, Sei-Woong;Park, Jeong Sun;Kim, Iksoo
    • International Journal of Industrial Entomology and Biomaterials
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    • v.43 no.1
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    • pp.6-15
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    • 2021
  • We investigated the taxonomic status of the Korean populations of Eurema hecabe (Linnaeus, 1758) based on morphology and nuclear triose phosphate isomerase (Tpi). Up to now, the Korean population of E. hecabe was classified into E. mandarina (de l'Orza, 1869) based on morphological characteristics. A previous study raised the possibility of the Jeju-do population to be E. hecabe based on the color of forewing's fringe. However, morphological examination showed that the Korean population found in southern areas (Gyeonsang and Jeolla provinces), including Jeju-do is E. mandarina. In particular, the external morphology of autumn seasonal type of the Korean population was almost same as the Japanese mainland population, which is known as E. mandarina. Furthermore, sequence analysis of Tpi gene from nine individuals of E. mandarina collected in South Korean localities including Jeju-do clearly showed that all Korean specimens truly belong to E. mandarina.

Genetic Diversity and Population Structure of Glehnia littoralis (Umbelliferae) in Korea

  • Huh Man Kyu;Choi Joo Soo;Huh Hong Wook;Choi Yung Hyun;Choi Byung Tae
    • Journal of Physiology & Pathology in Korean Medicine
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    • v.17 no.6
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    • pp.1519-1523
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    • 2003
  • Glehnia littoralis Fr. Schmidt (Umbelliferae) is a short-lived herbaceous species that are mostly distributed throughout East Asia. Although G. littoralis has been regarded as ecologically important one, there is no report on population structure in Korea. Starch gel electrophoresis was used to investigate the allozyme variation and genetic structure of Korean populations of this species. A high level of genetic variation was found in G. littoral is populations. Nine enzymes revealed 18 loci, of which 12 were polymorphic (66.7%). Genetic diversity at the species and population levels were 0.159 and 0.129, respectively. The sexual and asexual reproduction, high fecundity, and colonization process are proposed as possible factors contributing to genetic diversity. An indirect estimate of the number of migrants per generation (Nm = 1.45) indicated that gene flow was not extensive among Korean populations of this species. It is suggested that the ability of vegetation and artificial selection may have played roles in shaping the population structure of this species. we recommend that a desirable conservation population should be included at least 30 plants per population and especially those with high variation.

A Population Viability Analysis (PVA) for Re-introduction of the Oriental White Stork (Ciconia boyciana) in Korea

  • Sung, Ha-Cheol;Park, Shi-Ryong;Cheong, Seokwan
    • Korean Journal of Environmental Biology
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    • v.30 no.4
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    • pp.307-313
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    • 2012
  • The Oriental White Stork (Ciconia boyciana) is a representative wetland species distributed across East Asia. The species has been declined to face the threat of species extinctions with estimation of at about 3000 individuals. In order to re-introduce the endangered storks in the field, we developed a baseline model using the program VORTEX, performed sensitivity test, and finally suggested an ideal model based on results of the sensitivity test. The baseline model predicted 12.5% extinction probability with mean time to first extinction of 82.0 year. Sensitivity test revealed that two demographic variables (first-year mortality and percent of adult female breeding) had the greatest impacts on population persistence. Thus, corrected model improved the population persistence, where the extinction probability decreased to 1.0% in 100 years by changing values of two variables within a range of applicable to the population. Our models for stork re-introduction suggest this population will be stable by improving first-year mortality and adult female fecundity.

The Roles of Restoration Ecology, Landscape Ecology and Conservation Biology to Restore the Environment (환경복원에서 복원생태학, 경관생태학, 보전생물학의 역할)

  • Kim, Myoung Soo
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.6 no.4
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    • pp.17-23
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    • 2003
  • Restoration ecology is undergoing rapid growth as academic field over the last 15 years. The specification of goals for restoration projects is frequently described as the most important component of a project. The endeavor for universal development of goals for ecological restoration continues to generate many discussion and controversy. I discuss the importance of restoration goals and diverse roots of restoration ecology, and show how the complex lineages within restoration ecology. I review the three major theme that currently are used to develop the restoration goals : restoration of species, restoration of whole ecosystem or landscapes, and the restoration of ecosystem services. Restoration ecology, landscape ecology and conservation biology share goals to conserve biodiversity, but differ in focus of approach. I review the differences among three fields. Conservation biology has been more zoological, more descriptive, and theoretical, and more emphasized the population and genetic research. However, restoration ecology has been more plant ecological, more experimental, and emphasized the community and plant succession. Landscape ecology has emphasized the interaction of ecosystem and dispersal among populations. I suggest the integration of restoration ecology, landscape ecology and conservation biology. For example, conservation biology will contribute to the preservation of original habitats by population study, restoration ecology will contribute to regenerate damaged ecosystem and ex situ preservation, and landscape ecology will contribute to restoration of population and landscape.