• Title/Summary/Keyword: polyphyly

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Phylogenetic Classification of Antrodia and Related Genera Based on Ribosomal RNA Internal Transcribed Spacer Sequences

  • Kim, Seon-Young;Park, So-Yeon;Jung, Hack-Sung
    • Journal of Microbiology and Biotechnology
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    • v.11 no.3
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    • pp.475-481
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    • 2001
  • Sequences of ribosomal internal transcribed spaces (ITS) obtained from two Antrobia species and two related species were compared to investigate intrageneric and intergeneric phylogenetic relationships of Antrodia. The results showed that Antrodia species causing a brown rot in wood did not form a monophyletic clade and were separated into three distinct groups. Antrodia gossypina and A. vaillantii formed a clade having rhizomorphs as a homologous character. Antrodia serialis, A. sinuosa, and A. malicola formed a group together with Daedalea, Fomitopsis, and Postia species with brown rot habit. Antrodia xantha with a trimitic hyphal system and amyloid skeletal hyphae formed another distinct clade form other Antrodia species. The Antrodia species were separated from white rot genera such as Antrodiella, Diplomitoporus, Junghuhnia, and Steccherinum, indicating the phylogenetic importance of the rot type in the classification of the Polyporaceae.

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Phylogenetic Relationships in Korean Elaeagnus L. Based on nrDNA ITS Sequences

  • Son, OGyeong;Yoon, Chang Young;Park, SeonJoo
    • Korean Journal of Plant Resources
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    • v.27 no.6
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    • pp.671-679
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    • 2014
  • Molecular phylogenetic analyses of Korean Elaeagnus L. were conducted using seven species, one variety, one forma and four outgroups to evaluate their relationships and phylogeny. The sequences of internal transcribed spacer regions in nuclear ribosomal DNA were employed to construct phylogenetic relationships using maximum parsimony (MP) and Bayesian analysis. Molecular phylogenetic analysis revealed that Korean Elaeagnus was a polyphyly. E. umbellata var. coreana formed a subclade with E. umbellata. Additionally, the genetic difference between E. submacrophylla and E. macrophylla was very low. Moreover, E. submacrophylla formed a branch from E. macrophylla, indicating that E. submacrophylla can be regarded as a variety. However, several populations of this species were not clustered as a single clade; therefore, further study should be conducted using other molecular markers. Although E. glabra f. oxyphylla was distinct in morphological characters of leaf shape with E. glabra. But E. glabra f. oxyphylla was formed one clade by molecular phylogenetic with E. glabra. Additionally, this study clearly demonstrated that E. pungens occurs in Korea, although it was previously reported near South Korea in Japan and China. According to the results of ITS regions analyses, it showed a resolution and to verify the relationship between interspecies of Korean Elaeagnus.

The morphological study of Galium L. (Rubiaceae) in Korea (분계분석을 이용한 한국산 갈퀴덩굴속(Galium L.) 식물의 외부형태학적 연구)

  • Jeong, Keum Seon;Pak, Jae-Hong
    • Korean Journal of Plant Taxonomy
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    • v.42 no.1
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    • pp.1-12
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    • 2012
  • To clarify the morphological variations of Galium, its morphological characteristics were examined using maximum parsimony analysis. The key characteristics as well as the range of variation in each characteristic were investigated at the species level and were employed to elucidate the relationships between the taxa. This study confirmed that species belonging to genus Galium formed a monophyletic group and comprised two main clades. Sect. Cymogaliae and sect. Leptogalium are polyphyly groups, and other sections are monophyletic group. This study also suggests that the fruit hairs, the types of petal apexes, and the colors of the petals are the most valuable taxonomic characteristics for differentiating different sections. The numbers of the leaves and leaf shape provide useful taxonomic characteristics for the identification of different species.

On the Debates of Arthropod Phylogeny (절지동물 계통에 관한 논쟁)

  • 황의욱
    • Animal Systematics, Evolution and Diversity
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    • v.18 no.1
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    • pp.165-179
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    • 2002
  • In spite of dramatic change of environmental condition since Cambrian big-bang (explosion occurred ca.540 mya, the phylum Arthropoda retains a great diversity, and it is estimated approximately that 1-10 million arthropod species are extant on the earth. Except for an extinct arthopod subphylum Trilobita, extant arthropods could be divided into five subphyla: Hexapoda, Crustacea, Myriapoda, Chelicerata, and Pycnosonida. During the last century, systematists have disputed about interrealtionships among Arthropoda and its relatives (Onychophora, Tardigrada, and Pentastomida), arthropod phylogenetic position within protostome animals, monophyly or polyphyly of the phylum Arthropods, and interrelationships among five arthropod subgroups (subphyla) etc. Recently, new animal phylogeny was reported that protostomes could be clustered into two groups, Lophotrochozoa and Ecdysozoa, and molting animals such as Nematoda and Arthropoda were included within the Ecdysozoa. On the basis of the new animal phylogeny, first of all, I would mention phylogenetic positions and relationships of Arthropods and its relatives to introduce controversies of arthropod phylogeny in phylum level of animals. After that, I focused mainly on the controveries related to arthropod monophyly and phylogenetic relationships among four major arthropod groups except Pycnogonida. In this work, Pycnogonida which is a relatively small group and one of the five arthropod subphyla was not handled significantly although there are some controversies if it is a sister taxon of chelicerates or the most primitive arthropod group (namely, a sister of four remains arthropod groups).