• Title/Summary/Keyword: polymorphic

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Polymorphic Variations of Pyrrhotite as related to Tungsten-Tin-Copper Mineralization at the Ohtani Mine, Japan (일본(日本) 대곡광산산(大谷鑛山産) Pyrrhotite의 성질(性質))

  • Kim, Moon Young;Nakamura, Takeshi
    • Economic and Environmental Geology
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    • v.19 no.1
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    • pp.57-66
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    • 1986
  • The ore deposit of the Ohtani mine is one of representatives of plutonic tungsten-tin veins related genetically to acidic magmatism of Late Cretaceous in the Inner zone of Southwest Japan. Based on macrostructures of vein filling, three major mineralization stages are distinguished by major tectonic breaks. The constituents of ore minerals are scheelite, cassiterite, chalcopyrite, pyrrhotite, sphalerite, with small amounts of cubanite, stannite, galena, native bismuth, bismuthinite, arsenopyrite and pyrite. The relationship between the polymorphic variations of pyrrhotite and the kinds of the associated characteristic of ore mineral, in relation with hypogene mineralization, has been demonstrated. Pyrrhotite of stage I is predominantly of the hexagonal phase (Hpo>Mpo). Pyrrhotite of stage II is mainly of the monoclinic phase ($Hpo{\ll}Mpo$). Pyrrhotite of stage III is a single monoclinic phase ($Hpo{\ll}Mpo$). The compositions of the hexagonal pyrrhotite decrease in Fe content ranging from 47.44 atom % Fe in stage I to 46.88 atom % Fe in stage III.

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Purity Test of Radish Hybrid Seeds Using Randomly amplified Polymorphic DNA Marker

  • Oh, Sei-myoung;Soontae Kwon
    • Journal of Life Science
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    • v.11 no.1
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    • pp.65-67
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    • 2001
  • In order to develop a rapid and simple method for testing the purity of radish hybrid seeds using a procedure based on the PCR(Polymerase chain reaction), eighty random primers were screened with the genomic DNA extracted from five day old seedlings of inbred parent lines and their F1 hybrids. Two primers, HRM-02 (5'-GAGACCAGAC-3') and HRM-19(5'-TGAGGCGTGT-3'), generate reproducible unique PCR patterns which can identify each parent lines as well as their hybrids. In actual test of randomly selected hybrid seeds using the two marker primers, the purity tested by one primer was exactly same as that of other primer. It suggests that one marker primer selected in this experiment is enough for the purity test of radish hybrid seeds. We demonstrates the use of RAPD(randomly amplified polymorphic DNAs) markers to identify each of inbred parent lines and hybrids by rapid and simple method.

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Genetic Structure In Korean Populations of Atractomorpha lata (Orthoptera: Pyrgomorphidae)

  • Jeong, Myeong-Ji;Gang, Sun-Seok;Yeehn, Yeeh
    • Animal cells and systems
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    • v.1 no.4
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    • pp.535-538
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    • 1997
  • Allozyme variation of seven enzyme systems was analyzed from 202 individuals from four Korean populations of Atractomorpha lata. These populations exhibit higher levels of values of in most other insects with a mean 64% of polymorphic loci and a mean 0.384 of expected heterozygosity within populations. Fixation indices indicated considerable substructuring within populations sampled (mean $F_{is}=0.403)$, indicating probable inbreeding or assortative mating coupled with restricted migration between subpopulations. This was supported by the field observation that the species exists as small, discrete colonies in meadow habitats and females carry males. In addition, significant differences in allere frequencies between males and females at polymorphic loci examined (70%, 16 of 23 cases) could account for the observed heterozygote deficiencies.

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A Generalized Let-Polymorphic Type Inference Algorithm (일반화된 Let-다형성 타입 유추 알고리즘)

  • Lee, Uk-Se;Lee, Gwang-Geun
    • Journal of KIISE:Software and Applications
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    • v.28 no.1
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    • pp.73-89
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    • 2001
  • 본 연구에서는 일반화된 let-다형성(let-polymorphic) 타입 유추 알고리즘을 제시하고, 이로부터 얻어지는 모든 예 알고리즘들은 Hindley/Milner 타입 체계를 안전하고 완전하게 (sound and complete) 구현하고 있음을 증명하며, 일반화된 알고리즘의 두 예 알고리즘들간에 어느 한쪽이 항상 오류를 더 신속히 감지하게 되는 조건을 제시한다. 일반화된 알고리즘으로부터 이론적으로 검증된 두 타입 유추 알고리즘, 즉, 상향성 표준 타입 유추 알고리즘 W와 하향성 알고리즘 M 뿐만 아니라 두 알고리즘의 혼성 알고리즘(hybrid algorithm)을 만들 수 있다. 만들어진 예 알고리즘들의 안전성, 완전성, 상대적인 신속한 오류 감지 성질들은 본 논문의 증명에 의해 자동적으로 유추된다. 본 논문에서 제시되는 알고리즘으로부터 만들어 낼 수 있는 예 알고르즘에는 SML/NJ와 Objective Caml 컴파일러에서 채택한 알고리즘을 포함하고 있다.

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Genetic Diversity in Rauvolfia tetraphylla L.f using RAPD Markers

  • Padmalatha, K;Prasad, MNV
    • Journal of Plant Biotechnology
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    • v.33 no.2
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    • pp.139-145
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    • 2006
  • The present study is the first report of molecular variations in different accessions of Rauvolfia tetraphylla L.f, a medicinally important plant collected from seven locations of Andhra Pradesh, India. Molecular analysis was carried out using RAPD markers. Out of the 40 primers screened from OPA and OPC Kts, a total of 205 scorable polymorphic markers out of 397 total markers were generated. Polymorphism of 51.6% was found with 3 unique markers. Levels of genetic diversity within accessions i.e., the genetic distance ranged from 0.816-0.932. Cluster analysis based on Dice coefficient showed two major groups indicating that mostly in cross-pollinated plants, high levels of differentiation among accessions exists independent of geographical distance. Hence the results of the present study can be seen as a starting point for future researches on the population and evolutionary genetics of this species. Understanding such variation would also facilitate their use in various conservational management practices, rootstock breeding and hybridisation programmes.

Discrimination of Genuines and Misuses of Hu-Bak medicines by Morphological Characters and Random Amplified Polymorphic DNA Analysis (형태특징 및 RAPD분석에 의한 후박(厚朴) 약재의 진위감별)

  • Lee, Mi-Young;Kim, Hong-Jun;Ju, Young-Seung;Ko, Byoung-Seob
    • Korean Journal of Oriental Medicine
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    • v.9 no.2
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    • pp.83-94
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    • 2003
  • For identification of genuine and misuse samples of Hu-Bak medicines, an morphological characters, and RAPD (random amplified polymorphic DNA) were performed. In this study, three samples were collected, of which two were genuine and one was misuse sample. Genuine samples of 'Hu-Bak' were Magnolia obovata Thunberg and Magnolia officinalis Rehder et Wilson. Misuse samples was Machilus thunbergii S. et Z. In the morphological characters, M. obovata Thunberg and M. officinalis Rehder et Wilson were similar, but M. thunbergii S. et Z. was different with cortex, cambium, and fibrous layer. The result of RAPD analysis, seven primers can distinguish between genuines and counterfeit samples of Hu-Bak medicines.

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Genetic Diversity of Phomopsis citri with Random Amplified Polymorphic DNA (RAPD) and Fungicide Resistance (RAPD 및 약제저항성을 이용한 감귤 검은점무늬병균의 유전적 다양성 분석)

  • 고영진;서정규;이태선;송장훈;권혁모;문덕영;문두길;한해룡
    • Korean Journal Plant Pathology
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    • v.14 no.2
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    • pp.171-176
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    • 1998
  • Gentic diversity of 42 isolates of Phomopsis citri was analyzed with random amplified polymorphic DNA(RAPD) and fungicide resistance. RAPD profiles of genomic DNA of the isolates of P. citri and the degrees of their resistance to the fungicides mancozeb and propineb suggested the occurrence of genetic differentiation of P. citri distributed in Cheju. The isolates showed genetically diverse RAPD profiles according to the host species collected even from the same collection site and also according to the geographic origin collected even from the same host species. High levels of resistance to fungicides mancozeb and propineb were observed among the isolates of P. citri. However, there was no correlation between RAPD profiles of genomic DNA and levels of fungicide resistance of the isolates, suggesting that fungicide resistance of P. citri occurred irrespective of the host and geographic origin.

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Identification of DNA polymorphisms in the field bean ( Glycine soza S. and Z. ) using RAPD markers (RAPD 표지인자를 이용한 돌콩 DNA 다형현상 분석)

  • 이성규
    • Journal of The Korean Society of Grassland and Forage Science
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    • v.18 no.2
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    • pp.143-150
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    • 1998
  • Six field bean (GI-vcine soza S and Z ) plants were examined for their genetic polymorphisms and intraspecific variations using randomly amplified polymorphic DNA(RAPD) markers. In RAPD analysis of 5 random primers (Rp-1, Rp2, Rp-3, Rp-4, Rp-5), 30 of total 155 bands obtained kom 5 primers were polymorphic and sizes of polymirphic band ranged between 0.5 and 3.0 kb. Number of bands amplyfied per primer was varied from 2 to 11 and average number was 6.0. Genetic variation of intraspecies in the samples of six region was ranged behveen 11 to 25 percent, and genetic similarity among intraspecies was ranged from 0.69 to 0.78. In pairwise genetic similarity test of six field bean plants, Mun and Hoj showed highest coefficient of genetic similarity as 0.67, whereas Sin and Hoj was lowest as 0.45. According to the genetic similarity, the level of intraspecific variation is higher than that of regional distance in GI-vcine soza.

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DNA Fingerprinting by Amplified Fragment Length Polymorphism Markers in Rainbow Trout(Oncorhynchus mykiss)

  • Yoon, Jong-Man;Park, Sang-Hoon
    • Proceedings of the Korean Society of Fisheries Technology Conference
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    • 2001.05a
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    • pp.559-560
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    • 2001
  • The objective of the present study was to analyze genetic variation and characteristics in rainbow trout(Oncorhynchus mykiss) using amplified fragment length polymorphism(AFLP) method as molecular genetic technique, to evaluate the usefulness of AFLP as genetic markers, and to compared the efficiency of agarose and polyacrylamide sequencing gels. The amplified products were performed by agarose and sequencing gel electrophoresis to detect AFLP band patterns, respectively. Using 9 primer combinations, total of 141 AFLP bands were produced, 108 bands(82.4%) of which were polymorphic in agarose gels. In sequencing gels, total of 288 bands were generated, and 220 bands (76.4%) were polymorphic. The level of bandsharing(BS) ranged from 0.18 to 0.32 for the 9 primer combinations tested, with a mean of 0.24. Consequently, AFLP markers of these rainbow trout could be used as genetic information such as species identification, genetic relationship or analysis of genome structure, and selection aids for genetic improvement of economically importment traits in fish species.

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New polymorphic microsatellite markers for the endangered fern Ceratopteris thalictroides (Parkeriaceae)

  • CHO, Won-Bum;HAN, Eun-Kyeong;KWAK, Myounghai;LEE, Jung-Hyun
    • Korean Journal of Plant Taxonomy
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    • v.48 no.2
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    • pp.129-133
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    • 2018
  • Ceratopteris thalictroides is a semi-aquatic fern with a circumtropical distribution. Because this species is designated internationally on the IUCN Red List as requiring at least some concern, Korean populations are of great concern for the species' long-term survival, as they are at the northern limit of the species distribution. To establish an effective conservation strategy for those populations at the genetic level, we used the Mi-Seq platform to develop three sets of 25 polymorphic microsatellite markers for C. thalictroides, which is endangered in Korea. In populations sampled from Busan and Gochang, the number of alleles ranged from 2 to 13 (average of 5.64), and plants presented an expected heterozygosity of 0.000 to 0.860. These markers will be useful for evaluating the genetic status and conserving Korean populations of C. thalictroides more effectively.