• 제목/요약/키워드: poly(3-hydroxyalkanoate)

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미생물 합성에 의한 poly(3-hydroxybutyrate)의 분자량과 말단관능기 제어 (Control of Molecular Weight and Terminal Groups of Poly(3-hydroxybutyrate) in Bio-synthesis)

  • 이찬우
    • 한국염색가공학회지
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    • 제30권2호
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    • pp.130-140
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    • 2018
  • In the bio-synthesis of poly(3-hydroxybutyrate)(PHB), which is a kind of poly(3-hydroxyalkanoate)(PHA), aimed to control the low molecular weight of PHB and obtain a telechelic PHB. As a result of incubation of R. eutropha at $30^{\circ}C$ with ethylene glycol added as a chain transfer agent, PHB content on the dry cell weight increased up to 24h, however, it decreased after that, and the molecular weight of PHB increased from 9h to 12h, and then, decreased up to 72h. The decrease of the content and the molecular weight of PHB indicates that PHB was decomposed as an energy source in bacterial cells and was incorporated into metabolic pathways. $^1H-NMR$ of the obtained PHB after incubation for 72h was measured to determine the terminal groups of the PHB during incubation. As the results of $^1H-NMR$ measurement, the peaks derived from ethylene glycol in both terminals of PHB were observed. Which indicate that the terminal reaction was caused by the addition of ethylene glycol, and that telechelic PHB having hydroxyl group at the both terminals where molecular weight was controlled was successfully synthesized.

Molecular Characterization of Extracellular Medium-chain-length Poly(3-hydroxyalkanoate) Depolymerase Genes from Pseudomonas alcaligenes Strains

  • Kim Do Young;Kim Hyun Chul;Kim Sun Young;Rhee Young Ha
    • Journal of Microbiology
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    • 제43권3호
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    • pp.285-294
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    • 2005
  • A bacterial strain M4-7 capable of degrading various polyesters, such as poly$(\varepsilon-caprolactone)$, poly(3-hydroxybutyrate-co-3-hydroxyvalerate), poly(3-hydroxyoctanoate), and poly(3-hydroxy-5-phenylvalerate), was isolated from a marine environment and identified as Pseudomonas alcaligenes. The relative molecular mass of a purified extracellular medium-chain-length poly(3-hydroxyalkanoate) (MCL-PHA) depolymerase $(PhaZ_{palM4-7})$ from P. alcaligenes M4-7 was 28.0 kDa, as determined by SDS-PAGE. The $PhaZ_{palM4-7}$ was most active in 50 mM glycine-NaOH buffer (pH 9.0) at $35^{\circ}C$. It was insensitive to dithiothreitol, sodium azide, and iodoacetamide, but susceptible to p-hydroxymercuribenzoic acid, N-bromosuccinimide, acetic anhydride, EDTA, diisopropyl fluorophosphate, phenylmethylsulfonyl fluoride, Tween 80, and Triton X-100. In this study, the genes encoding MCL-PHA depolymerase were cloned, sequenced, and characterized from a soil bacterium, P. alcaligenes LB19 (Kim et al., 2002, Biomacro-molecules 3, 291-296) as well as P. alcaligenes M4-7. The structural gene $(phaZ_{palLB19})$ of MCL-PHA depolymerase of P. alcaligenes LB19 consisted of an 837 bp open reading frame (ORF) encoding a protein of 278 amino acids with a deduced $M_r$ of 30,188 Da. However, the MCL-PHA depolymerase gene $(phaZ_{palM4-7})$ of P. alcaligenes M4-7 was composed of an 834 bp ORF encoding a protein of 277 amino acids with a deduced Mr of 30,323 Da. Amino acid sequence analyses showed that, in the two different polypeptides, a substrate-binding domain and a catalytic domain are located in the N-terminus and in the C-terminus, respectively. The $PhaZ_{palLB19}$ and the $PhaZ_{palM4-7}$ commonly share the lipase box, GISSG, in their catalytic domains, and utilize $^{111}Asn$ and $^{110}Ser$ residues, respectively, as oxyanions that play an important role in transition-state stabilization of hydrolytic reactions.

Characterization of a Tacky Poly(3-Hydroxyalkanoate) Produced by Pseudomonas chlororaphis HS21 from Palm Kernel Oil

  • YUN, HYE SUN;DO YOUNG KIM;CHUNG WOOK CHUNG;HYUNG WOO KIM;YOUNG KI YANG;YOUNG HA RHEE
    • Journal of Microbiology and Biotechnology
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    • 제13권1호
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    • pp.64-69
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    • 2003
  • Pseudomonas chlororaphis HS21 was isolated from a soil sample and found to produce medium-chain-length polyhydroxyalkanoates (MCL-PHAs) using palm kernel oil (PKO) as the sole carbon source. Up to 3.3 g/1 dry cell weight containing $45\%$ MCL-PHA was produced, when the strain was grown for 21 h in a jar fermentor culture containing 5 g/1 PKO. The polymer produced from PKO consisted of unsaturated monomers of $7.3\%$ 3-hydroxy-5-cis-tetradecenoate and $2.3\%$ 3-hydroxy-5,8,-cis, cis-tetradecadienoate as well as saturated even-carbon number monomers ranging from $C_6\;to\;C_14$, as determined by GC and El GC/MS The PHA was a transparent, sticky material at room temperature. A differential scanning calorimetric analysis revealed that the polymer was amorphous with a $-44^{\circ}C$ glass transition temperature. The number average molecular weight and polydispersity index of the PHA were 83,000 and 1.53, respectively. Although the PHA was practically biodegradable, its degradability was lower than that of poly(3-hydroxyoctanoate) based on a comp:trison of the clear zones formed by growing PHA depolymerase-producing bacteria on an agar plate containing the respective polymers.

DNA shuffling을 이용한 Alcaligenes faecalis T1의 PHB depolymerase 활성 증진 (Enhancement of PHB depolymerase Activity from Alcaligenes faecalis T1 by DNA Shuffling)

  • 신동성;이영하;남진식
    • 미생물학회지
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    • 제39권2호
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    • pp.76-82
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    • 2003
  • Alcaligenes faecalis T1의 Poly(3-hydroxybutyrate)(PHB) depolymerase활성 증진을 위해 DNA shuffling방법을 이용하였다. 제조된 A. faecalis T1의 PHB depolymerase 돌연변이 유전자의 library를 Pseudomonas syringae의 icenucleation protein유전자를 포함하는 발현벡터 pJHCll에 클로닝하여 약 7,000개의 형질전환체를 얻었다. 탄소원으로 PHB또는 poly(3-hydroxybutyrate-co-3-hydroxyvalerate)를 포함하는 M9최소배지를 이용하여 형질전환체들로부터 활성이 서로 다른 돌연변이주들을 선별하였다. 이들의 PHB depolymease 활성은 평판배지에서의 halo형성 및 배양 상등액을 이용한 탁도 감소 실험으로 확인하였으며,형질전환체들 중에서 shuffling전의 대조군에 비하여 사용된 기질에 따라 효소활성이 1.8-3.2배 증진된 II-4 돌연변이주를 얻었다. DNA 염기서열의 분석을 통하여 II-4의 PHB depolymease에는 3개의 아미노산 치환(A1a209Va1, Leu258Phe, Asp263Thr)이 이루어졌음을 확인하였다. 여러 가지 돌연변이주의 아미노산 서열의 변화를 분석한 결과, PHB depolymerase의 catalytictriad주위에 기존 아미노산에 비하여 보다 소수성인 아미노산으로의 치환이 소수성 기질인 PHB에 대한분해 활성 중진에 기여하는 것으로 추정되었다.

Pseudomonas sp. EML8 균주를 이용한 폐식용류로부터 medium-chain-length poly(3-hydroxyalkanoates) 생합성 (Production of Medium-chain-length Poly (3-hydroxyalkanoates) by Pseudomonas sp. EML8 from Waste Frying Oil)

  • 김태경;김종식;정정욱
    • 생명과학회지
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    • 제31권1호
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    • pp.90-99
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    • 2021
  • 본 연구에서는 poly (3-hydroxyalkanoate) (PHA)의 생산 비용을 줄이기 위해, 토양에서 분리된 균주 Pseudomonas sp. EML8을 이용하여 폐 튀김유(waste frying oil, WFO)를 단일 탄소원으로 하여 균주의 최적 생장 및 PHA의 생합성 조건을 확립하였다. WFO를 단일 탄소원으로 이용하여 Pseudomonas sp. EML8에 의해 생합성된 PHA를 gas chromatography (GC)와 GC mass spectrometry로 분석한 결과, 7.28 mol% 3-hydrxoyhexanoate, 39.04 mol% 3-hydroxyoctanoate, 37.11 mol% 3-hydroxydecanoate 및 16.58 mol% 3-hydoryxdodecanoate의 단량체로 이루어진 medium-chain-length PHA (mcl-PHAWFO)라는 것을 확인하였다. 플라스크로 배양한 결과, Pseudomonas sp. EML8의 최대 건조세포중량(dry cell weight, DCW) 및 mcl-PHAWFO의 최대 생산수율(g/l)은 WFO 20 g/l, (NH4)2SO4 0.5 g/l, pH 7 및 25℃의 조건에서 확인되었다. 이 결과를 바탕으로 3 l 발효기를 이용하여 48시간 배양한 후에 가장 높은 DCW, mcl-PHAWFO의 함량 및 mcl-PHAWFO의 생산수율(3.0 g/l, 62 wt% 및 1.9 g/l)을 얻었다. 대조군인 신선한 튀김유(fresh frying oil, FFO) 20 g/l를 탄소원으로 사용하여 이와 유사한 DCW, mcl-PHAFFO의 함량 및 mcl-PHAFFO의 생산수율(2.7 g/l, 62 wt%, 1.6 g/l)을 확인했다. 겔 투과 크로마토그래피 분석을 통해 mcl-PHAWFO 및 mcl-PHAFFO의 평균 분자량이 165-175 kDa인 것을 확인했으며, 열중량을 분석한 결과, mcl-PHAWFO 및 mcl-PHAFFO는 각각 260 및 274.7℃의 분해온도값을 보여주었다. 결론적으로 본 연구에서는 Pseudomonas sp. ML8과 WFO는 mcl-PHA의 생산을 위한 새로운 균주와 탄소원으로서의 사용 가능성을 확인하였다.

X-ray Diffraction and Infrared Spectroscopy Studies on Crystal and Lamellar Structure and CHO Hydrogen Bonding of Biodegradable Poly(hydroxyalkanoate)

  • Sato Harumi;Murakami Rumi;Zhang Jianming;Ozaki Yukihiro;Mori Katsuhito;Takahashi Isao;Terauchi Hikaru;Noda Isao
    • Macromolecular Research
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    • 제14권4호
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    • pp.408-415
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    • 2006
  • Temperature-dependent, wide-angle, x-ray diffraction (WAXD) patterns and infrared (IR) spectra were measured for biodegradable poly(3-hydroxybutyrate) (PHB) and its copolymers, poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) P(HB-co-HHx) (HHx=2.5, 3.4, 10.5, and 12 mol%), in order to explore their crystal and lamellar structure and their pattern of C-H...O=C hydrogen bonding. The WAXD patterns showed that the P(HB-co-HHx) copolymers have the same orthorhombic system as PHB. It was found from the temperature-dependent WAXD measurements of PHB and P(HB-co-HHx) that the a lattice parameter is more enlarged than the b lattice parameter during heating and that only the a lattice parameter shows reversibility during both heating and cooling processes. These observations suggest that an interaction occurs along the a axis in PHB and P(HB-co-HHx). This interaction seems to be due to an intermolecular C-H...O=C hydrogen bonding between the C=O group in one helical structure and the $CH_3$ group in the other helical structure. The x-ray crystallographic data of PHB showed that the distance between the O atom of the C=O group in one helical structure and the H atom of one of the three C-H bonds of the $CH_3$ group in the other helix structure is $2.63{\AA}$, which is significantly shorter than the sum of the van der Waals separation ($2.72{\AA}$). This result and the appearance of the $CH_3$ asymmetric stretching band at $3009 cm^{-1}$ suggest that there is a C-H...O=C hydrogen bond between the C=O group and the $CH_3$ group in PHB and P(HB-co-HHx). The temperature-dependent WAXD and IR measurements revealed that the crystallinity of P(HB-co-HHx) (HHx =10.5 and 12 mol%) decreases gradually from a fairly low temperature, while that of PHB and P(HB-co-HHx) (HHx = 2.5 and 3.5 mol%) remains almost unchanged until just below their melting temperatures. It was also shown from our studies that the weakening of the C-H...O = C interaction starts from just above room temperature and proceeds gradually increasing temperature. It seems that the C-H...O=C hydrogen bonding stabilizes the chain holding in the lamellar structure and affects the thermal behaviour of PHB and its copolymers.