• Korean Journal of Ecology and Environment
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• v.54 no.2
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• pp.102-107
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• 2021

The distribution pattern of species richness was determined by temperature. To examine the relationship between hemipteran richness and temperature, hemipteran species were collected using pitfall traps at six different oak forest sites with different annual mean temperatures in South Korea. Multiple linear regression analyses were conducted with mean annual temperature (MAT) and plant richness to evaluate differences in hemipteran richness. The influences of MAT and plant richness of study sites on hemipteran richness were examined by comparing three models (plant richness+MAT+MAT², plant richness+MAT, and MAT) or two models (plant richness+MAT and MAT). Hemipteran richness showed an inverse diversity pattern as a function of temperature, with higher species richness at lower temperature sites. Meanwhile, Aphididae showed a bell-shaped diversity pattern with the highest value at low medium temperatures. The regression analysis showed that hemipteran richness was affected by temperature and plant richness in their habitats.

• The Plant Pathology Journal
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• v.15 no.3
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• pp.131-136
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• 1999

In fungi known as ascomycetes, ability to mate is controlled by a single mating type (MAT) locus with two dissimilar sequences called idiomorphs carrying genes encoding transcription factors that are unrelated to each other. Fungi requiring strains with different MAT genes to complete the sexual process are heterothallic (self-sterile); species in which as single strain is able to undergo sexual reproduction are homothallic (self-fertile). Previous analysis of sequences from several heterothallic and homothallic species of the ascomycete genus Cochliobolus showed that homothallics evolve from heterothallics and that each known Cochliobolus homothallic species arose independently, from a different heterothallic ancestral species. Here we report detailed comparative analyses of MAT sequences ad their flanking regions, and show that: (1) The level of MAT gene similarity is not correlated with reproductive life style; (2) MAT proteins from all Cochliobolus species are conserved within the transcription factor signature sequences; they are not conserved in the carboxy terminal half of MAT-1, or third of MAT-2, except in those from very closely related species; (3) A gene (ORF1) of unknown function, consistently found on the MAT flank, is more conserved than are the MAT genes themselves; (4) The intergenic sequences diverge sharply among species.

• Proceedings of the Korean Society of Plant Pathology Conference
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• 2003.10a
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• pp.85.1-85
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• 2003

In most ascomycetes, a single mating type locus, MAT, with two alternate forms (MAT1-1 and MAT1-2) called idiomorphs, controls mating ability. In heterothallic ascomycetes these alternate idiomorphs reside in different nuclei. In contrast, most homothallic ascomycetes carry both MAT1-1 and MAT1-2 in a single nucleus, usually closely linked. An example of the latter is Gibberella zeae, a producer of mycotoxins such as trichothecene and zearalenone that threaten human and animal health. We asked if G. zeae could be made strictly heterothallic by manipulation of MAT. Targeted gene replacement was used to differentially delete MAT1-1 or MAT1-2 from a wild type haploid MAT1-1 MAT1-2 strain, resulting in MAT1-1；mat1-2, mat1-1；MAT1-2 strains that were self-sterile, yet able to cross to wild type testers and more importantly, to each other. These results indicated that differential deletion of MAT idiomorphs eliminates selfing ability of G. zeae, but the ability to outcross is retained. To our knowledge, this is the first report of complete conversion of fungal reproductive strategy from homothallic to heterothallic by targeted manipulation of MAT. Practically, this approach opens the door to simple and efficient procedures for obtaining sexual recombinants of G. zeae that will be useful for genetic analyses of mycotoxin production and other traits, such as ability to cause disease.

• Journal of the Korean Society of Environmental Restoration Technology
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• v.4 no.4
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• pp.25-35
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• 2001

This study aims to find out the growth characteristics of riparian plants on the artificial floating islands (AFI). Three types of experiments were performed. The vegetation growth were compared by the plant-supporting materials; natural cotton mat, coir mat on the AFI or in the water, and natural soil at the waterfront. Major findings are; 1. The survival rate of riparian plants was 100% on both coir-mat and cotton-matislands, which implies that we may substitute cheaper cotton for expensive coir-mat. 2. Both natural cotton mat and coir mat were good for the growth of plants. Especially, the natural cotton mat was good for Sparganium stoloniferum and Miscanthus sacchariflorus, and the coir mat was good for Typha latifolia. 3. The growth rate of stem and root showed difference between the stem-removed plants and stem-remaining plants. As a whole, the growth rate of stem-removed plants was bigger than the one of stem-remaining plants. 4. The growth rate of plants showed difference between those grown on the AFI and those grown in the water. The growth rate of plant on the AFI was bigger than the one in the water. 5. The growth rate of plants on the AFI was bigger than the one on the natural soil at the waterfront.

• The Korea Journal of Herbology
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• v.33 no.3
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• pp.25-35
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• 2018

Objectives : Lepidii seu Descurainiae Semen has been frequently adulterated with the seeds of several inauthentic plant species. However, the accurate identification of these plant seeds is very difficult. To develop a reliable genetic authentication tool for Lepidii seu Descurainiae Semen, we analyzed matK sequence. Methods : To obtain the matK sequences of plant materials, genomic DNA was extracted from 24 samples and PCR amplification was carried out using matK-AF/matK-8R universal primer set and matK-LDSF/matK-LDSR primer set. For identifying species-specific nucleotides and phylogenetic analysis, matK regions were sequenced and comparatively analyzed by the ClustalW and Maximum Likelihood method. Results : We developed a new primer set to amplify matK region in Lepidii seu Descurainiae Semen and closely related plant samples. From the comparative analysis of matK sequences, we identified species-specific marker nucleotides for D. sophia, L. apetalum, L. latifolium, E. cheiranthoides, E. macilentum, and D. nemorosa, respectively. Furthermore, phylogenetic analysis revealed clear classification depending on the species. These results indicated that the matK sequence obtained a new primer set in this study was useful to identify Lepidii seu Descurainiae Semen in species level. Conclusions : We developed a primer set and identified species-specific marker nucleotides enough to distinguish authentic Lepidii seu Descurainiae Semen and adulterants at the species level based on the matK sequences. These genetic tool will be useful to prevent adulteration and to standardize the quality of Lepidii seu Descurainiae Semen.

• Journal of Ecology and Environment
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• v.42 no.4
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• pp.220-227
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• 2018

Background: To understand the ecological characteristics of floating mat in which endangered species of Iris laevigata and Menyanthes trifoliata inhabit, we surveyed the vegetation and water environments of a floating mat wetland and examined the relations between ecological characteristics of the mat. Results: Although Phragmites australis and Zizania latifolia were found at all experimental quadrats (n = 61) as the major vegetational components of the floating mat wetland, they showed relatively poor growth performances in terms of shoot height (< 2 m) and biomass production (<$300g/m^2$) compared with those in soil-based wetlands because of oligotrophic water condition. The competitiveness and distribution of P. australis and Z. latifolia seemed to be determined by water level difference by micro-topography rather than water chemistry. Conclusion: P. australis and endangered plant species mainly occurred in the area of relatively shallow water, whereas Z. latifolia and deep-water species such as Scirpus fluviatilis mostly inhabit in the area of deep water on the floating mat. Continuously maintained water level and oligotrophic water condition in the floating mat appeared to be important environments for endangered species such as I. laevigata and M. trifoliata.

• Korean Journal Plant Pathology
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• v.10 no.4
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• pp.249-253
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• 1994

Twenty six isolates of Magnaporthe grisea originated from rice and other gramineous hosts Korea were tested for mating type with MAT1-1 and MAT1-2 standard isolates. Ninety three and 64% of rice and grass isolated mated and produced perithecia with standard isolates, respectively. Both mating types were found from rice and non-rice isolates, but MAT1-1 allele of M. grisea was predominant in Korea.

• Journal of Plant Biotechnology
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• v.47 no.1
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• pp.15-25
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• 2020

Allium L. is one of the largest genera of the Amaryllidaceae family, with more than 920 species including many economically important species used as vegetables, spices, medicines, or ornamental plants. Currently, DNA barcoding tools are being successfully used for the molecular taxonomy of Allium. A total of 46 Allium species were collected from their native areas, and DNA was extracted using the IBRC DNA extraction kit. We used specific primers to PCR amplify matK. DNA sequences were edited and aligned for homology, and a phylogenetic tree was constructed using the neighbor-joining method. The results show thymine (38.5%) was the most frequent and guanine (13.9%) the least frequent nucleotide. The matK regions of the populations were quite highly conserved, and the amount of C and CT was calculated at 0.162 and 0.26, respectively. Analysis of the nucleotide substitution showed C-T (26.22%) and A-G (8.08%) to have the highest and lowest percent, respectively. The natural selection process dN/dS was 1.16, and the naturality test results were -1.5 for Tajima's D and -1.19 for Fu's Fs. The NJ dendrogram generated three distinct clades: the first contained Allium austroiranicum and A. ampeloprasum; the second contained A. iranshahrii, A. bisotunense, and A. cf assadi; and the third contained A. rubellum and other species. In this study, we tested the utility of the matK region as a DNA barcode for discriminating Allium. species.

• Korean Journal of Plant Resources
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• v.20 no.4
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• pp.304-308
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• 2007

In order to find out the optimum fertilizer level and planting density of high yielding variety, $Okayma^{#2}$, this experiment was conducted with 3 compositions of fertilizer levels and a different plant density at the experiment paddy field of mat rush in Mokpo Experiment Station, National Institute of Crop Science, RDA. $Okayma^{#2}$, mat rush variety was grown under different fertilizer level and planting density with the highest yielding. Yield components such as stem length, number of stem were highest at the plots with fertilizer level (kg/10a), 80-20-40 and planting density, 20 ${\times}$ 10cm. Judging from the results reported above, at optimum fertilizer level and planting density of mat rush seemed to be 80-20-40kg/10a fertilizer and 20cm row spacing and l0cm or I5cm planting spacing.

• Journal of the Korean Society of Environmental Restoration Technology
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• v.6 no.2
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• pp.78-88
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• 2003

This study was conducted to develop the plant-mat for ecological restoration which was formed as the thin multi-layers of woven nets, soil media, seeds, etc. The experimental site was selected at a slope of 240$m^2$ at the rear of Design College of Sangmyung University and divided into 8 sub-experimental plots (20$m^2$ each) according to mat types. (forest-type and grass-type mats with and without seed attachment, respectively) Also, the existing vegetation plot and the no-treatment plot were included in this experiment for comparison. The experiment construction was conducted on September 3, 2002. Mat covered plots regardless of seed attachment showed nearly no signs of erosion even if rainy season in summer compared to the no-treatment plot. Vegetation monitoring result showed that germination rates were somewhat high in both forest and grass-type mats without seed attachment in the initial germination stage. Although germination rates of seed attached mats were somewhat slower than non-seed attached mats in the germination stage, but over time, it showed a good rooting and shooting environment for germinated tree and grass species because of soil media existence within the mat. This indicates that while non seed-attached mats require follow-up maintenance, seed-attached mats does not require maintenance after rooting and germination.