• Journal of Microbiology and Biotechnology
• /
• 제30권3호
• /
• pp.368-377
• /
• 2020

Enterotoxigenic Bacteroides fragilis (ETBF) is the main pathogen causing severe inflammatory diseases and colorectal cancer. Its biofilm plays a key role in the development of colorectal cancer. The objective of this study was to determine the antagonistic effects of cell-free supernatants (CFS) derived from Clostridium butyricum against the growth and biofilm of ETBF. Our data showed that C. butyricum CFS inhibited the growth of B. fragilis in planktonic culture. In addition, C. butyricum CFS exhibited an antibiofilm effect by inhibiting biofilm development, disassembling preformed biofilms and reducing the metabolic activity of cells in biofilms. Using confocal laser scanning microscopy, we found that C. butyricum CFS significantly suppressed the proteins and extracellular nucleic acids among the basic biofilm components. Furthermore, C. butyricum CFS significantly downregulated the expression of virulence- and efflux pump-related genes including ompA and bmeB3 in B. fragilis. Our findings suggest that C. butyricum can be used as biotherapeutic agent by inhibiting the growth and biofilm of ETBF.

• 한국제4기학회:학술대회논문집
• /
• 한국제4기학회 2004년도 하계학술대회
• /
• pp.51-51
• /
• 2004

As an important contribution to the planed drilling (IODP) in the central part of the Arctic Ocean, we are currently working on a refined chronostratigraphy for Marine Isotope Stage (MIS) 16 to MIS 2 on the exciting material from ODP Site 910A (Leg 151) which has been recovered from the marginal Eastern Arctic Ocean (the Yermak Plateau - the Atlantic/Arctic Ocean Gateway). Several stratigraphic age fix-points support the interpretation of the stable oxygen. isotope record of planktonic foraminifer N, pachyderma sin. that is punctuated by several short-term meltwater events. We believe that our new record will serve as 'the important correlating tool for establishing a basic stratigraphy for the Quaternary Arctic Ocean as well as for generating high-resolution paleoenvironmental reconstructions in the central Arctic Ocean. Furthermore, our study will provide reference stratigraphic data sets for interpreting the micropaleontological, sedimentological and organic / inorganic - geochemical proxies of the new boreholes that will be drilled on the Lomonosov Ridge(Central Arctic Ocean) in the frame of the "Arctic Coring Expedition' (ACEX, IODP) in summer 2004.

• Ocean and Polar Research
• /
• 제30권4호
• /
• pp.419-426
• /
• 2008

Ciliate plankton samples were collected biweekly from July 2006 to June 2008 in Jangmok Bay of Geoje Island. Species composition and abundances were analyzed by quantitative protargol stain and environmental parameters were also examined. A total of 88 ciliate species occurred during the study period, consisting of 22 tintinnids, 51 oligotrichs, and 15 other species. Higher ciliate abundances appeared from June to October during the warm season ($<20^{\circ}C$) and the maximum ($4.0{\times}10^4\;cells\;L^1$) in August, while the lower abundances were found during the cold season. The minimun ciliate abundance was found in November when water temperature rapidly decreased. The temporal succession of dominant species was very clear and opportunistic. Pelagostrombidium sp., Tontonia simplicidens, Helicostomella subulata, and Myrionecta rubra were co-dominant in summer while Rimostrombidium orientale occurred abundantly in winter. Strombidium tressum and S. compressum, eurythermal species, were observed during all seasons. Based on the species-specific ecology of ciliate plankton, it is suggested that the indicative ciliate species can be applied as a biological tool to detect environmental change in the southern coastal waters of korea.

• 한국제4기학회지
• /
• 제17권2호
• /
• pp.1-7
• /
• 2003

Environmental changes caused by the abrupt climatic change are one of the important issues in the scientific community. In the East Sea, abrupt climatic shift, called Younger Dryas, is identified. The age of the Younger Dryas cold episode occurred at 11.2 ka. Overall, changes in circulation and bottom water conditions occurred during the Younger Dryas cold episode in the study area. Especially, climatic transition from meltwater spike to the Younger Dryas cold episode is characterized by significant shifts of oxygen isotope values, the coiling ratios of Neogloboquadrina pachyderma, and the planktonic foraminifers abundances. The impact of abrupt climate change on the ecosystem is very significant. In the East Sea, the calcium carbonate secreting organism(foraminifers) is replaced by silicon dioxide secreting organisms(diatom, radiolarian) after the abrupt and severe cold climatic event. Based on the Doctrine of Uniformitarianism, at least climate change for the next 100 years would be severely influence on the marine ecosystem.

• Journal of Microbiology and Biotechnology
• /
• 제25권7호
• /
• pp.1114-1118
• /
• 2015

Microbial fuel cells (MFCs) have gathered attention as a novel bioenergy technology to simultaneously treat wastewater with less sludge production than the conventional activated sludge system. In two different operations of the MFC and aerobic process, microbial growth was determined by the protein assay method and their biomass yields using real wastewater were compared. The biomass yield on the anode electrode of the MFC was 0.02 g-COD-cell/gCOD-substrate and the anolyte planktonic biomass was 0.14 g-COD-cell/g-COD-substrate. An MFC without anode electrode resulted in the biomass yield of 0.07 ± 0.03 g-COD-cell/g-CODsubstrate, suggesting that oxygen diffusion from the cathode possibly supported the microbial growth. In a comparative test, the biomass yield under aerobic environment was 0.46 ± 0.07 g-COD-cell/g-COD-substrate, which was about 3 times higher than the total biomass value in the MFC operation.

• 한국수산과학회지
• /
• 제46권4호
• /
• pp.467-487
• /
• 2013

Long-term and systematic monitoring of phytoplankton is important, as phytoplankton serve as indicators of water quality status in aquatic environments. In the present study, the plankton community structure of the Nakdong River estuary over the past 30 years was investigated by literature survey to provide references for the occurrence of planktonic species. A total of 876 species from 18 taxonomic lineages were reported and, among them, 569 species were identified to occur seasonally at the Mulgeum, Seonam and Eulsukdo sites. Diatoms and chlorophytes were dominant in the microscopic studies. The 54 species at the Mulgeum and the 96 species at the Eulsukdo sites have not been reported since the river barrage construction in 1987. The majority of reports speculate that there has been a change in the aquatic environment, particularly the plankton community structure, due to operation of a river barrage since 1987.

• ALGAE
• /
• 제18권3호
• /
• pp.207-215
• /
• 2003

Dynamics of phytoplankton communities were investigated at five stations in Youngsan River from December 1995 to November 1996. Phytoplankton were identified to the total of 466 taxa, which were composed of 136 genera, 438 species, 27 varieties and 1 forma. The standing crops ranged 1,163-50,765 cells ${\cdot}ml^{-1}$ during the investigation periods. The variation of classes was in order to Chrysophyceae - Bascillariophyceae - Chlorophyceae at St. 1 and was only Bacillariophyceae at the other stations. The dominant species were 12 taxa including Aulacoseira ambigua, A. garnulata, Cyclotella meneghiniana, C. pseudostelligera, Chlorella vulgaris, Dinobryon sertularia, Flagilaria elliptica, Monoraphidium contortum, Micractinium pusillum, Nitzschia palea, Scenedesmus grahneisii and Stephanodiscus hantzschii f. tenuis. The standing crops of dominant species ranged from 10.6% to 94.7%. The genus Dinobryon in Chrysophyceae was dominant species at St. 1 in December 1995, but not recorded in the other months. The dominant species were composed with the planktonic diatoms from winter to spring and were the tychoplanktonic and the benthic species at St. 2-5 from summer to fall. The relationships between total standing crops and water temperature, pH, $NH_4$, $NO_2$, $NO_3$ and $PO_4$ showed low positive or negative coefficients. Stephanodiscus hantzschii f. tenuis had low positive or negative coefficients with water temperature, $NH_4$, $NO_2$, $NO_3$ and $PO_4$. The fluctuations of standing crops in the Youngsan river phytoplankton community were not caused by a single factor but controlled by the complex factors with interaction between phytoplankton community and envirowmental factors.

• 한국해양학회지
• /
• 제12권1호
• /
• pp.13-32
• /
• 1977

In order to determine the distributional ecology, and to investigate factors influencing these features, the diatom communities in plankton at depths of one, twenty-five, fifty, and seventy five meters in the area were studied and measured over a fifteen month of period. Measurements of environmental factors including temperature and salinity and algal nutrients such as phosphate, silicate, nitrate, and ammonia were also made at the same depths and locations. The results indicate that the size of diatom communities and the species population changes were heavily dependent upon to season and location parameters as well as nutrient concentrations and hydrographic factors. Major factors influencing population distributions varied with principal species responsible for dominant species and species sucession. Two distinct distributional patterns in total diatom crop were observed in the study area. Maximum standing crop observed during spring and/or summer were related to the concentration of nutrients available at the onset of the spring bloom on a large scale. On a small scale, however, the distributions of total diatom standing crops were significantly correlated with both season/location factors and with hydrographic parameters as well. Vertical stratification of diatoms was observed only in the presence of the thermocline in the water column. Within the study area there was some seasonal consistancy in the composition of the species groups. However, some species association in these environments may vary with the change of season.

• 생태와환경
• /
• 제38권4호통권114호
• /
• pp.435-438
• /
• 2005

We observed the physical, chemical, and biological characteristics of an acidic lake, Lake Katanuma, from 1998 to 2002 at weekly or biweekly intervals, except during the winter. This volcanic lake has a dimictic thermal pattern. In summer, the volcanic heat supply at the lake bottom results in weak thermal stratification. In 1998, 1999, and 2002, short-term holomixis was observed during the stratification period, when the anoxic, hydrogen sulfide-rich water from the hypolimnion spread across the entire lake. In contrast, distinct short-term holomixis did not occur during the stratificatlon period in 2000 and 2001. However, the early onset of the autumn turnover in August 2000 and 2001 caused anoxic conditions to persist throughout the entire water column for more than 2 weeks. The anoxic and hydrogen sulfide-rich conditions affected population densities of chironomid larvae (Chironomus acerbiphilus) and planktonic algae (Chlamydomonas acidophila), both dominant species in Lake Katanuma. Thus, the interannual variations of limnological characteristics influenced the seasonal population changes of these species.

• Journal of the korean society of oceanography
• /
• 제35권1호
• /
• pp.46-55
• /
• 2000

In order to understand the role of heterotrophic protists in the coastal waters off Inchon, abiotic and biotic factors were measured from January 1992 to February 1993. Microbial carbon biomass (mean212.9$^{\pm}$119.1 $^{\mu}$gC/1) was composed of 4.2% bacteria, 0.3% cyanobacteria, 12.l% autotrophic nanoflagellates, 6.6% heterotrophic nanoflagellates, 5.8 heterotrophic ciliates and 71.0% diatom and Mesodinium spp. The carbon biomass of heterotrophic protists (heterotrophic nanoflagellates and ciliates) was highest in October 1992 (mean 37.8$^{\pm}$22.5 $^{\mu}$gC/1), and was low in August 1992 (mean 21.2$^{\pm}$10.8 $^{\mu}$gC/1) and in February 1993 (mean 19.5$^{\pm}$6.4 $^{\mu}$gC/1). However, the contribution of heterotrophic protists to total microbial carbon biomass was higher in January 1992 and February 1993 (about 21%) when the phytoplankton was dominated by nanoplankton than in August and October (about 9%) when large diatoms occurred in large numbers. This study suggests that in Kyeonggi Bay heterotrophic protists might play a more important role as prey for zooplankton and as consumers of bacteria & small phytoplankton in less productive seasons (especially winter) than in productive seasons (autumn), and that the classic trophic pathway from diatoms through copepods to fish might be dominant nearly every season.