• Title/Summary/Keyword: operon

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Malonate Metabolism: Biochemistry, Molecular Biology, Physiology, and Industrial Application

  • Kim, Yu-Sam
    • BMB Reports
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    • v.35 no.5
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    • pp.443-451
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    • 2002
  • Malonate is a three-carbon dicarboxylic acid. It is well known as a competitive inhibitor of succinate dehydrogenase. It occurs naturally in biological systems, such as legumes and developing rat brains, which indicates that it may play an important role in symbiotic nitrogen metabolism and brain development. Recently, enzymes that are related to malonate metabolism were discovered and characterized. The genes that encode the enzymes were isolated, and the regulation of their expression was also studied. The mutant bacteria, in which the malonate-metabolizing gene was deleted, lost its primary function, symbiosis, between Rhizobium leguminosarium bv trifolii and clover. This suggests that malonate metabolism is essential in symbiotic nitrogen metabolism, at least in clover nodules. In addition to these, the genes matB and matC have been successfully used for generation of the industrial strain of Streptomyces for the production of antibiotics.

Plasmid Stability and Cloned-Gene Expression in Continuous Culture of Recombinant Escherichia Coli Under Derepressed Condition

  • Nam, Soo-Wan;Kim, Byung-Kwan;Kim, Jung-Hoe
    • Journal of Microbiology and Biotechnology
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    • v.4 no.1
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    • pp.1-6
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    • 1994
  • Continuous culture was carried out with a recombinant Escherichia coli W3110/pCR185, which encodes trp-operon enzymes when the temperature is shifted from $37^{circ}C\;t;42^{\circ}C$. Under derepressed condition of $42^{\circ}C$. plasmlid stability and gene expression were analysed as function of the dilution rate. The stability of plasmid increased with the dilution rate, but maximal levels of gene expression (tryptophan concentration) and plasmid DNA content were obtained at the lowest dilution rate, $0.075\;hr^{-1}$. The plasmid instability, observed at low dilution rates, could be explained by the unbalanced biosynthetic state of the recombinant cell harboring a high copy number of plasmid.

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HpkA, a Histidine Protein Kinase Homolog, is Required for Fruiting Body Development in Myxococcus xanthus

  • Park, Sooyeon;Kim, Jihoon;Lee, Bongsoo;Zusman, David R;Cho, Kyungyun
    • Journal of Microbiology and Biotechnology
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    • v.13 no.3
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    • pp.400-405
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    • 2003
  • A gene (hpkA), encoding a histidine protein kinase homolog, has been identified in the upstream region of the espAB operon in Myxococcus xanthus. It encodes a 333 amino acid (35,952 Da) protein with a histidine protein kinase domain in the region from amino acid 90 to 317. Null mutations in the hpkA gene caused formation of loose irregular fruiting bodies, while wild-type strains developed tight hemispherical fruiting bodies under developmental conditions. Sporulation of the hpkA mutant was delayed by at least 12 h compared to that of the wild-type. It appeared that the hpkA mutation increased the expression of the espAB operon by more than 2-fold compared with the wild-type under developmental conditions. Expression of the hpkA gene was low under vegetative conditions, but was highly induced under developmental conditions.

Genotoxicity Assay Using Chromosomally-Integrated Bacterial recA::Lux

  • Min, Ji-Ho;Gu, Man-Bock
    • Journal of Microbiology and Biotechnology
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    • v.13 no.1
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    • pp.99-103
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    • 2003
  • An Escherichia coli strain containing the recA promoter that fused to the luxCDABE operon originating from Photorhabdus luminescens was shown to respond sensitively to genotoxic stresses. Two different recombinant bacteria, one (DPDI 657) harboring a plasmid with the recA promoter that fused to the luxCDABE operon, and the other (DPD1710) containing a chromosomally-integrated recA promoter that fused with luxCDABE, were compared and it was found that the sensitivity of 'the two strains was significantly different in terms of their bioluminescent level, response time, and the minimum detectable concentration of a chemical causing DNA damaging stress. DPDI 710, with a chromosomally-integrated single copy, generally led to lower basal luminescence levels, faster responses, increased response ratios, and an enhanced sensitivity to mutagens, when compared to DPD 1657 with a multi-copy plasmid.

Studies on the $HIS_5$ Gene of Yeast -$HIS_5-lacZ$ fusion and regulation in Saccharomyces cerevisiae- (효모 $HIS_5$ 유전자에 관한 연구 -Saccharomyces cerevisiae의 $HIS_5-lacZ$ 융합과 조절-)

  • Chung, Dong-Hyo;Oshima, Yasuji;Nishiwaki, Kyoni
    • Applied Biological Chemistry
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    • v.28 no.1
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    • pp.36-47
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    • 1985
  • $HIS_5$ gene of Saccaromyces cerevisiae was cloned into pBR 322 and also into pSH 610 shuttle vector. $HIS_5$ gene was expressed as promoter of lactose operon(lacZ). And $HIS_5-lacZ$ fusion was intergrated into chromosome III of yeast. $HIS_5$ gene in yeast growth was controlled general amino acid control mechanism.

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Operon Required for Fruiting Body Development in Myxococcus xanthus

  • Kim, Do-Hee;Chung, Jin-Woo;Hyun, Hye-Sook;Lee, Cha-Yul;Lee, Kyoung;Cho, Kyung-Yun
    • Journal of Microbiology and Biotechnology
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    • v.19 no.11
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    • pp.1288-1294
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    • 2009
  • We have used mutational analysis to identity four genes, MXAN3553, MXAN3554, MXAN3555, and MXAN3556, constituting an operon that is essential for normal fruiting body development in Myxococcus xanthus. Deletion of MXAN3553, which encoded a hypothetical protein, resulted in delayed fruiting body development. MXAN3554 was predicted to encode a metallopeptidase, and its deletion caused fruiting body formation to fail. Inactivation of MXAN3555, which encoded a putative NtrC-type response regulator, resulted in delayed aggregation and a severe reduction in sporulation. Fruiting bodies also failed to develop with the deletion of MXAN3556, another gene encoding a hypothetical protein.

Molecular Regulation of Pyrimidine Nucleotide Synthesis in Bacterial Genomes

  • Ghim, Sa-Youl
    • Proceedings of the Korean Society for Applied Microbiology Conference
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    • 2001.06a
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    • pp.165-168
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    • 2001
  • Regulation of pyrimidine nucleotide synthesis has been studied extensively in enteric bacteria and Bacillus species. Varieties of control modes have been proposed for regulation of pyrimidine nucleotide biosynthetic (pyr) genes. In Bacillus caldolyticus and B. subtilis, it has been proved that pyrimidine de novo biosynthetic operon is controlled by a regulatory protein PyrR-mediated attenuation. Another Gram-positive bacteria including Enterococcus faecalis, Lactobacillus plantarum, and wctococcus lactis have been found to constitute a pyr gene cluster containing the pyrR gene. In addition, it has been proposed that the structure of the 5' leader region of the Gram-negative extreme thermophile Thermus strain Z05 pyr operon provides a novel mechanism of PyrR-dependent coupled transcription-translation attenuation. Bacterial genome sequencing projects have identified the PyrR homologues in Haemophilus influenzae, Synechocystis sp., Mycobacterium tuberculosis, Streptococcus pneumoniae, S. pyogenes, and Clostridium acetobutylicum, which are currently investigating for their physiological functions.

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Cloning and expression of escherichia coli K-12 $trpL({\Delta}att)\;trpE^{FBR}$ gene in klebsiella pneumoniae (Klebsiella pneumoniae에 있어서의 escherichia coli K-12 $trpL({\Delta}att)\;trpE^{FBR}$유전자의 클로닝 및 발현)

  • 지연태;김익영;이세영
    • Korean Journal of Microbiology
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    • v.22 no.4
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    • pp.229-234
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    • 1984
  • A modified E. coli trp operon, $trpL({\Delta}att)\;trpE^{FBR}$, was conjugally transfered into Klebsiella pneumoniae $KC_{100}\;(Phe^-,\;Tyr^-,\;Trp^-,\;Rif^r,\;Kam^r)$ by in vivo cloning using the hybrid plasmid $R_{6}K::$ Mucts 61 with a transfer frequency of $5.2{\times}10^{-7}$. Two K. pneumoniae transconjugants, $KUA_{701}\;and\;KUA_{702}$, were isolated. The characters of attenuation control-free and resistance to feedback-inhibition which are characteristics of donor C. coli trp operon were normally expressed in the $KUA_{701}.\;However,\;KUA_{702}$ retained only the feedback-inhibition resistant character. $Trp^+$ phenotype and ampicillin resistant character were completely stable in the transconjugants, but streptomycin resistant character was lost in the transconjugants.

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