• 한국균학회지
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• 제26권2호통권85호
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• pp.163-172
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• 1998

국내외에서 수집된 Pleurotus속 13종 32균주와 종(species)이 밝혀지지 않은 4균주 등 모두 36균주의 동위효소 분석에 의한 종간 유연관계를 파악하기 위하여 본 실험을 수행하였다. Pleurotus속 균주들의 균사체에서 수용성 단백질을 추출하여 등전점 전기영동 isozyme polymorphic banding pattern법으로 여섯 종류의 동위효소 즉 esterase, glucosephosphate isomerase, leucine aminopeptidase, malate dehdrogenase, peroxidase, phosphoglucomutase를 분석하여 총 166개 밴드를 확인하였고 36개 느타리 균주의 종간 다형성을 관찰하였다. Esterase가 종간에 가장 다양한 밴드 pattern을 나타내어 종의 구별에 아주 유용한 동위효소라 생각되며, 다른 동위효소에서도 종간 다형성을 관찰할 수 있었다. 동위효소 분석 결과 유연관계가 가장 가까운 종은 P. florida와 P. sajor-caju로 유사도가 약 89%였으며, 연구에 이용된 총 13종간의 유사도는 약 77%였다. 분류상 논란이 많이 되는 P. ostreatus는 P. pulmonarius 종과 확실히 구별되었으며 P. florida도 독립된 종으로 판명되었다. 그러나 P. sapidus와 P. spodoleucus 균주들은 확실한 종의 판명이 어려웠다. Isozyme polymorphic banding pattern 결과와 현미경적인 형태 분류에 의한 종 판명 결과가 몇 종을 제의하고는 일치하였다. 동위효소를 이용한 분류는 매우 유용하다고 판단되었다.

• Current Research on Agriculture and Life Sciences
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• 제20권
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• pp.1-8
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• 2002

재배종과 야생종의 인공교잡 분리세대에서 주요형질들의 변이와 유전력을 조사하여 야생종을 이용한 콩 품종육성의 기초자료를 얻고자 수행한 결과를 요약하면 다음과 같다. 두 인공교배의 $F_2$ 집단에서 100립중을 제외한 나머지 조사 형질들은 초월분리를 보였다. $F_1$과 $F_2$의 평균 개화일수는 양친의 중간정도로 정규분포를 보였다. 백립중의 $F_1$ 평균은 은하콩, 소백나물콩 두 조합 각각 6.2, 5.7g으로 소립종 쪽으로 치우쳤으며, 입중의 분포는 소립종 쪽으로 치우친 정규분포를 보였다. $F_2$의 평균수량은 양친의 중간정도이었다. $F_1$의 덩굴성은 두 조합 각각 6.4, 6.6이었으며 $F_2$ 평균은 은하콩 조합이 6.0으로 덩굴성 쪽으로 치우쳐 덩굴성이 부분적인 우성을 보였으나, 소백나물콩 조합에서는 4.6으로 은하콩과는 다른 결과를 보였다. 경장, 개화일수, 개체당 협수, 수량, 도복, 덩굴성 등은 높은 광의의 유전력을 보였으며 100립중은 협의의 유전력이 은하콩 조합에서 52.3%, 소백나물콩 조합에서 65.6%로 평가되어 초기세대에서의 선발이 가능한 것으로 나타났다.

• 미생물학회지
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• 제24권2호
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• pp.154-160
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• 1986

Cellulose분해력이 높은 Cellulomonas속 세균의 원형질체 융합을 위한 원형질체 형성조건을 조사하여 본 결과 같은 Cellulomonas 속인 Cellulomonas sp. C S 1- 1과 Cellulomonas flavigena NCIB 12901 균주일지라도 그 형성조건에 현저한 차이가 있어 CS1-l균주는 lysozyme농도 $100{\mu}g/ml$ 30분정도의 처리로 99.9%의 높은 원형질체 형성을 얻을 수 있는 반면 C.flavigena 균주는 lysozyme 농도도 훨씬 높고 장시간이 소요되어 $600{\mu}g/ml$. 6시간 정도의 처리에 약80%의 원형질체 형성을 보였다. 또한 세균 배양기간이 미치는 영향도 CS1-l균주는 별 영향을 받지 않고 원형질체화 되었으나 C. flavigena균주는 매우 민감하게 영향을 받아 대수증식기 중기의 세포가 말기의 세포보다 원형 질체가 잘 이루어 졌다. 원형질체 형성확인방법에서도 CS-1 균주는 osmotic shock을 주어 원형질체를 계수하거나 SEM으로 확인하거나 같은 결과를 얻었으나 C. flavigena 균주는 osmotic shock에 의한 원형질체의 계수결과와 SEM으로의 결과가 서로 달라 확인방법으로 두 방법이 병행되어져야 함을 보여주었다.

• BMB Reports
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• 제39권4호
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• pp.361-370
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• 2006

Genetic variation and molecular phylogeny of 22 taxa representing 14 extant species and 3 unidentified taxa of Boesenbergia in Thailand and four outgroup species (Cornukaempferia aurantiflora, Hedychium biflorum, Kaempferia parviflora, and Scaphochlamys rubescens) were examined by sequencing of 3 chloroplast (cp) DNA regions (matK, psbA-trnH and petA-psbJ). Low interspecific genetic divergence (0.25-1.74%) were observed in these investigated taxa. The 50% majority-rule consensus tree constructed from combined chloroplast DNA sequences allocated Boesenbergia in this study into 3 different groups. Using psbA-1F/psbA-3R primers, an insertion of 491 bp was observed in B. petiolata. Restriction analysis of the amplicon (380-410 bp) from the remaining species with Rsa I further differentiated Boesenbergia to 2 groupings; I (B. basispicata, B. longiflora, B. longipes, B. plicata, B. pulcherrima, B. tenuispicata, B. thorelii, B. xiphostachya, Boesenbergia sp.1 and Boesenbergia sp.3; phylogenetic clade A) that possesses a Rsa I restriction site and II (B. curtisii, B. regalis, B. rotunda and Boesenbergia sp.2; phylogenetic clade B and B. siamensis; phylogenetic clade C) that lacks a restriction site of Rsa I. Single nucleotide polymorphism (SNP) and indels found can be unambiguously applied to authenticate specie-origin of all investigated samples and revealed that Boesenbergia sp.1, Boesenbergia sp.2 and B. pulcherrima (Mahidol University, Kanchanaburi), B. cf. pulcherrima1 (Prachuap Khiri Khan) and B. cf. pulcherrima2 (Thong Pha Phum, Kanchanaburi) are B. plicata, B. rotunda and B. pulcherrima, respectively. In addition, molecular data also suggested that Boesenbergia sp.3 should be further differentiated from B. longiflora and regarded as a newly unidentified Boesenbergia species.

• 식물분류학회지
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• 제50권1호
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• pp.8-16
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• 2020

Complete chloroplast genome sequences provide detailed information about any structural changes of the genome, instances of phylogenetic reconstruction, and molecular markers for fine-scale analyses. Recent developments of next-generation sequencing (NGS) tools have led to the rapid accumulation of genomic data, especially data pertaining to chloroplasts. Short reads deposited in public databases such as the Sequence Read Archive of the NCBI are open resources, and the corresponding chloroplast genomes are yet to be completed. The V. dilatatum complex in Korea consists of four morphologically similar species: V. dilatatum, V. erosum, V. japonicum, and V. wrightii. Previous molecular phylogenetic analyses based on several DNA regions did not resolve the relationship at the species level. In order to examine the level of variation of the chloroplast genome in the V. dilatatum complex, raw reads of V. dilatatum deposited in the NCBI database were used to reconstruct the whole chloroplast genome, with these results compared to the genomes of V. erosum, V. japonicum, and three other species in Viburnum. These comparative genomics results found no significant structural changes in Viburnum. The degree of interspecific variation among the species in the V. dilatatum complex is very low, suggesting that the species of the complex may have been differentiated recently. The species of the V. dilatatum complex share large unique deletions, providing evidence of close relationships among the species. A phylogenetic analysis of the entire genome of the Viburnum showed that V. dilatatum is a sister to one of two accessions of V. erosum, making V. erosum paraphyletic. Given that the overall degree of variation among the species in the V. dilatatum complex is low, the chloroplast genome may not provide a phylogenetic signal pertaining to relationships among the species.

• Journal of Plant Biotechnology
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• 제39권1호
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• pp.13-22
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• 2012

Plant regeneration has been optimized increasingly by organogenesis and somatic embryogenesis using a range of explants with tissue culture improvements focusing on factors, such as the age of the explant, genotype, media supplements and $Agrobacterium$ co-cultivation. The production of haploids and doubled haploids using microspores has accelerated the production of homozygous lines in Brassicaceae crop plants. Somatic cell fusion has facilitated the development of interspecific and intergeneric hybrids in sexually incompatible species of $Brassica$. Crop improvement using somaclonal variation has also been achieved. Transformation technologies are being exploited routinely to elucidate the gene function and contribute to the development of novel enhanced crops. The $Agrobacterium$-mediated transformation is the most widely used approach for the introduction of transgenes into Brassicaceae, and $in$ $vitro$ regeneration is a key factor in developing an efficient transformation method in plants. Although many other Brassicaceae are used as model species for improving plant regeneration and transformation systems, this paper focuses on the recent technologies used to regenerate the most important Brassicaceae crop plants.

• Genomics & Informatics
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• 제13권4호
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• pp.102-111
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• 2015

The karyotypes of most species of crocodilians were studied using conventional and molecular cytogenetics. These provided an important contribution of chromosomal rearrangements for the evolutionary processes of Crocodylia and Sauropsida (birds and reptiles). The karyotypic features of crocodilians contain small diploid chromosome numbers (30~42), with little interspecific variation of the chromosome arm number (fundamental number) among crocodiles (56~60). This suggested that centric fusion and/or fission events occurred in the lineage, leading to crocodilian evolution and diversity. The chromosome numbers of Alligator, Caiman, Melanosuchus, Paleosuchus, Gavialis, Tomistoma, Mecistops, and Osteolaemus were stable within each genus, whereas those of Crocodylus (crocodylians) varied within the taxa. This agreed with molecular phylogeny that suggested a highly recent radiation of Crocodylus species. Karyotype analysis also suggests the direction of molecular phylogenetic placement among Crocodylus species and their migration from the Indo-Pacific to Africa and The New World. Crocodylus species originated from an ancestor in the Indo-Pacific around 9~16 million years ago (MYA) in the mid-Miocene, with a rapid radiation and dispersion into Africa 8~12 MYA. This was followed by a trans-Atlantic dispersion to the New World between 4~8 MYA in the Pliocene. The chromosomes provided a better understanding of crocodilian evolution and diversity, which will be useful for further study of the genome evolution in Crocodylia.

• 한국응용곤충학회지
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• 제35권2호
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• pp.104-113
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• 1996

Astipromma jezoense Uchida의 종내변이를 알아보기 위하여 지리적으로 상이한 서식지에서 채집되 7개 개체군을 대상으로 계량형능학적분석을 실시하였다. 계량형능학적분석은 요인분석의 주성분분석과 판별분석을 실시하였으며, 주성분분석의 결과 25개의 형질이 4개의 factor들로 집약되어 나타났다. 이중 특히 다리의 형질들이 암·수모두에게 중요하게 작용하는 것으로 나타났다. 판별분석의 결과를 보면, 암·수 모두 서식하는 지리구에 따라 뚜렷한 형태적 gap이 존재하고 있음을 알수 있었고, 그러한 결과를 도출해낸 판별형질로는 암컷에서는 가운데 홑눈의 최장폭을(MOD)과 복부제1마디의 길이(FTL)가 숫컷에서는 뺨의 길이(MSL)가 가장 크게 작용하는 것으로 나타났다.

• Animal cells and systems
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• 제16권4호
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• pp.343-349
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• 2012

A variety of fish species undergo an ontogenetic change in prey selectivity, and several potentially interacting factors, including nutrient requirement, microhabitat change, and foraging ability, may account for the occurrence of the shift. Here we examine the foraging ecology and ontogenetic diet shift of a micro-carnivorous goby, Pterogobius elapoides (serpentine goby), dominant component of fish assemblage in shallow rocky areas off the coast in Korea and Japan. Although most other gobies are primarily benthic carnivores, P. elapoides is a semipelagic fish; however, little is known about how those species change their foraging tactics with growth. In our diet analyses, the most common diet was pelagic copepods and benthic amphipods, and diet shift was observed from pelagic to benthic with growth. The ontogenetic diet shift seems to be the result of the preference for energetically more profitable prey in larger-size classes as well as the results of different prey availability due to among-habitat variation in diet. However, differential food preference does not appear to affect individual scope for searching food. Several factors such as predation pressures and interspecific resource partitioning might contribute to the changes in diet observed among size classes, which were included in our ongoing tests.

• Weed & Turfgrass Science
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• 제3권3호
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• pp.190-195
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• 2014

Echinochloa (L.) P. Beauv. includes some of the noxious weeds, causing a serious yield loss when they are dominant in the fields. Identification of the Echinochloa is very difficult because many interspecific and intraspecific forms of the species are found. However, it is important to identify the species exactly and to know the genetic diversity of the species for effective weed management. This study was conducted to identify and summarize the Echinochloa species by comparing the genetic variation and relationship among Korean Echinochloa species using SSR. The genetic diversity of 107 individuals, including seven species were assessed using five SSR markers. UPGMA dendrogram generated two clades (I and II) and clade II divided again into two subclades (II-1 and II-2) whereas the model based genetic structure proposed four subpopulations. The two subpopulations were corresponded to clades I and II-1 and the other two were arranged to clade II-2 of the UPGMA dendrogram. We have concluded that E. colona and E. glabrescens might have not distributed in Korea. The biological varieties, praticola and echinata, of E. crus-galli should be treated as E. crus-galli. Korean Echinochloa should be summarized with four species, i.e., E. oryzicola, E. crus-galli, E. esculenta, and E. oryzoides.