• Title/Summary/Keyword: identification rate

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ZNF204P is a stemness-associated oncogenic long non-coding RNA in hepatocellular carcinoma

  • Hwang, Ji-Hyun;Lee, Jungwoo;Choi, Won-Young;Kim, Min-Jung;Lee, Jiyeon;Chu, Khanh Hoang Bao;Kim, Lark Kyun;Kim, Young-Joon
    • BMB Reports
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    • v.55 no.6
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    • pp.281-286
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    • 2022
  • Hepatocellular carcinoma is a major health burden, and though various treatments through much research are available, difficulties in early diagnosis and drug resistance to chemotherapy-based treatments render several ineffective. Cancer stem cell model has been used to explain formation of heterogeneous cell population within tumor mass, which is one of the underlying causes of high recurrence rate and acquired chemoresistance, highlighting the importance of CSC identification and understanding the molecular mechanisms of CSC drivers. Extracellular CSC-markers such as CD133, CD90 and EpCAM have been used successfully in CSC isolation, but studies have indicated that increasingly complex combinations are required for accurate identification. Pseudogene-derived long non-coding RNAs are useful candidates as intracellular CSC markers - factors that regulate pluripotency and self-renewal - given their cancer-specific expression and versatile regulation across several levels. Here, we present the use of microarray data to identify stemness-associated factors in liver cancer, and selection of sole pseudogene-derived lncRNA ZNF204P for experimental validation. ZNF204P knockdown impairs cell proliferation and migration/invasion. As the cytosolic ZNF204P shares miRNA binding sites with OCT4 and SOX2, well-known drivers of pluripotency and self-renewal, we propose that ZNF204P promotes tumorigenesis through the miRNA-145-5p/OCT4, SOX2 axis.

Study on Enhancing National Defense Security based on RFID and Internet of Things Technology (RFID와 사물인터넷을 활용한 국방 보안 강화에 대한 연구)

  • Oh, Se-Ra;Kim, Young-Gab
    • Asia-pacific Journal of Multimedia Services Convergent with Art, Humanities, and Sociology
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    • v.7 no.2
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    • pp.175-188
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    • 2017
  • Radio-frequency identification (RFID) is being used in various fields as a technology for identifying objects (people, things etc.) using radio frequencies. In the past, there was an attempt to apply RFID into national defense, but failed to spread RFID in the defense field because of some limitations of RFID in a specific situation (e.g., low recognition rate). Therefore, in this paper, we propose how to overcome the limitation of RFID by adopting the Internet of Things (IoT) technology which is considered as an important technology of the future. Furthermore, we propose four scenarios (i.e., healcare band and RFID, identification and anormal state detection, access control, and confidential document management) that can be used for enhancing national defense security. In addition, we analyze the basic characteristics and security requirements of RFID and IoT in order to effectively apply each technology and improve security level.

Molecular Identification and Effects of Temperature on Survival and Growth of Hybrids between Haliotis gigantea Gmelin (♀) and Haliotis discus hannai Reeve (♂)

  • An, Hye Suck;Han, Jong Won;Hwang, Hyun-Ju;Jeon, Hancheol;Jung, Seung-Hyun;Jo, Seonmi;Choi, Tae-Young;Hyun, Young Se;Song, Ha Yeun;Whang, Ilson
    • Journal of Marine Life Science
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    • v.2 no.2
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    • pp.83-89
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    • 2017
  • In abalones, interspecific hybridization has been suggested as a possible means to increase production and desired traits for the industry. In Korea, Haliotis gigantea is considered a species with a larger size and higher temperature tolerance than H. discus hannai. However, H. discus hannai is considered the most valuable and popular fishery resource due to its better acceptance and higher market prices. Thus, viable interspecific hybrids have been produced by artificial inseminating H. gigantea eggs with H. discus hannai sperm. However, the reciprocal hybrid cross was not successful. In this study, the hybridity and the growth and thermal tolerance performance of the interspecific hybrids were examined. A combination of various assays revealed maximum growth occurrence at 21℃ and the higher growth rate in the hybrids than that of H. discus hannai parent. In addition, the growth and survival at high-temperature (28℃) of the hybrids was equivalent to that of the highly tolerant H. gigantea parent, suggesting new possibilities to overcome the mass mortality in H. discus hannai during high temperature periods of summer season in Korea. Furthermore, the induced interspecific hybrid status was confirmed by the presence of species-specific bands for each parental species of the random amplified polymorphic DNA (RAPD) profiles using universal rice primer (URP), which could be used as speciesspecific markers to distinguish the hybrids and their parental species.

A Study on the Model for Determining the Deceptive Status of Attackers using Markov Chain (Markov Chain을 이용한 기만환경 칩입 공격자의 기만 여부 예측 모델에 대한 연구)

  • Sunmo Yoo;Sungmo Wi;Jonghwa Han;Yonghyoun Kim;Jungsik Cho
    • Convergence Security Journal
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    • v.23 no.2
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    • pp.37-45
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    • 2023
  • Cyber deception technology plays a crucial role in monitoring attacker activities and detecting new types of attacks. However, along with the advancements in deception technology, the development of Anti-honeypot technology has allowed attackers who recognize the deceptive environment to either cease their activities or exploit the environment in reverse. Currently, deception technology is unable to identify or respond to such situations. In this study, we propose a predictive model using Markov chain analysis to determine the identification of attackers who infiltrate deceptive environments. The proposed model for deception status determination is the first attempt of its kind and is expected to overcome the limitations of existing deception-based attacker analysis, which does not consider attackers who identify the deceptive environment. The classification model proposed in this study demonstrated a high accuracy rate of 97.5% in identifying and categorizing attackers operating in deceptive environments. By predicting the identification of an attacker's deceptive environment, it is anticipated that this model can provide refined data for numerous studies analyzing deceptive environment intrusions.

Identification of Void Diameters for Cast-Resin Transformers (몰드변압기의 보이드 결함 크기 판별)

  • Jeong, Gi-woo;Kim, Wook-sung
    • Proceedings of the Korean Institute of Information and Commucation Sciences Conference
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    • 2022.10a
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    • pp.570-573
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    • 2022
  • This paper presents the identification of void diameters for a cast-resin transformer using an artificial neural network (ANN) model. A PD signal was measured by the Rogowski coil sensor which has the planar and thin structures fabricated on a printed circuit board (PCB), and the PD electrode system was fabricated to simulate a PD defect by a void. In addition, void samples with different diameters were fabricated by injecting air in a cylindrical aluminum frame using a syringe during the epoxy curing process. To identify the diameter of void defects, PD characteristics such as the discharge magnitude, pulse count, and phase angle were extracted and back propagation algorithm (BPA) was designed using virtual instrument (VI) based on the Labview program. From the experimental results, the BPA algorithm proposed in this paper has over 90% accurate rate to identify the diameter of void defects and is expected to use reference data of maintenance and replacement of insulation for cast-resin transformers in the on-site PD measurement.

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A study on vertical alignment liquid crystal devices for electrically polarization controlled camera (전기적 편광 조절형 카메라를 위한 수직 배향형 액정 소자 연구)

  • Na-Kyung Lee;Hyeon-Sik Ahn;Sung-Min Kim;Min-Sang Kim;Seungseo Park;Yoonseuk Choi
    • Journal of IKEEE
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    • v.27 no.4
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    • pp.512-517
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    • 2023
  • In this study, we propose a liquid crystal-based polarization control technology that can control polarization by adjusting the voltage applied to the liquid crystal, and apply it to a Closed-circuit Television (CCTV) to transmit only the desired angle of polarized light. CCTV with conventional polarizing films cannot control polarization because they focus on backlight compensation, so light reflected from the water surface or highlights reflected from vehicles interfere with subject identification. However, the Vertical Alignment mode allows the polarization to be adjusted electrically, so that only the polarized light at the user's desired angle is transmitted, eliminating reflected highlights. The images obtained using this technique are optimized by computer software. Liquid crystal polarization panels, which can electrically control the polarization angle, transmittance, and polarization rate, have been applied to polarized image monitoring device to improve subject identification in conventional CCTV.

Experimental Identification of the Damping Characteristics of a Squeeze Film Damper with Open Ends and Central Groove (열린 끝단과 중앙 홈을 갖는 스퀴즈 필름 댐퍼의 감쇠 특성에 대한 실험적 규명)

  • Nam Kyu Kim;Tae Ho Kim;Kyungdae Kang
    • Tribology and Lubricants
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    • v.40 no.1
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    • pp.28-37
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    • 2024
  • This paper presents the development of a squeeze film damper (SFD) test rig and experimental identification of the effects of clearance, damper length, journal eccentricity ratio, excitation amplitude, oil supply pressure, and oil flow rate on the damping coefficients of a test SFD with open ends and a central groove. Test data are compared with predictions from a simple model developed for short SFDs with open ends and a central groove. The test results show a significant decrease in the damping coefficient with increasing clearance and a dramatic increase with damper length, which are in good agreement with the simple model predictions. According to the simple model, the damping coefficient is inversely proportional to the cube of the clearance and directly proportional to the cube of the length. An increase in the journal eccentricity ratio results in a dramatic increase in the damping coefficient by as much as 15 times that of the concentric case, particularly at low excitation frequencies. By contrast, the measured damping coefficient remains almost constant with changes in the excitation amplitude and supply pressure, which are not major factors in the damper design. In general, the test data agree well with the simple model predictions, excluding cases that show increases in the SFD length and journal eccentricity, which indicate significant dependency on the excitation frequency.

THE EXPRESSION OF TGF-$\beta$1, IGF-I, BFGF IN DISTRACTION OSTEOGENESIS ACCORDING TO DIFFERENT DISTRACTION RATES IN RABBIT'S MANDIBLE (가토 하악골에서 신연 골형성술시 신연속도에 따른 TGF-$\beta$1, IGF-I, bFGF의 발현)

  • Shin, Sun-A;Jee, Yu-Jin;Song, Hyun-Chul
    • Maxillofacial Plastic and Reconstructive Surgery
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    • v.27 no.3
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    • pp.205-217
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    • 2005
  • Distraction osteogenesis is a technique of lengthening bone including soft tissue by gradual separation of surgically divided bone surfaces. Although the biomechanical, histological, and ultrastructural changes associated with distraction osteogenesis have been widely described, the molecular mechanisms governing the formation of new bone in distracted bone segments remain largely unclear. However, such information has significant clinical implications because it may enable targeted therapeutic manipulations designed to accelerate osseous regeneration. The purpose of this study was to evaluate the expression of TGF-$\beta$1, IGF-I and bFGF in distraction osteogenesis according to different distraction rates in a rabbit's mandible. When twenty-four adult rabbits underwent open osteotomy between the premolar and mental foramen, an external bilateral distraction device was applied. Latency was allowed for five days before distraction. Three different distraction rates were 0.7 mm/day (A, n=8), 1.4 mm/day (B, n=8) and 2.4 mm/day (C, n=8). The distraction device was activated with the same distraction rhythms of twice a day until 4.9 mm (A & B group) and 8.4 mm (C group) length gains was achieved. The animals were sacrificed at postoperative 3, 7, 14 and 28 days. The bony specimens were stained with H&E for histologic examination, and RT-PCR analysis was done for the identification of the expression of TGF-$\beta$1, IGF-I and bFGF. The results obtained from this study were as follows : The 0.7 mm/day and 1.4 mm/day distraction rate groups were shown to improve regenerative bone formation on radiographic and histologic examination. Also, TGF-$\beta$1, IGF-I and bFGF expression increased in the 0.7 mm/day and 1.4 mm/day distraction rate groups. But the 2.4 mm/day distraction rate group specimen was different with adjacent normal bone and hardly expressed of growth factors. These findings suggest that improved new bone formation in the 0.7 mm/day and 1.4 mm/day distraction rates is associated with enhanced expression of TGF-$\beta$1, IGF-I and bFGF by mechanical tension stress. Additionally, the 0.7 mm/day and 1.4 mm/day distraction rate groups were significantly different from the 2.4 mm/day distraction rate group in the expression of growth factors. According to the above results, it seems possible to apply a distraction rate of up to 1.4 mm/day a day in rabbit's mandible. And further studies are needed to evaluate growth factors of TGF-$\beta$1 and IGF-I, which are excellent in expression.

DNA Yield and PCR Success Rate of the Establishment Time of Wood Annual Ring: A Case Study of Korean Red Pine (Pinus densiflora) (목재의 나이테 생성 시기에 따른 DNA 추출 수율 및 PCR 성공률: 소나무(Pinus densiflora) 목재의 사례)

  • So Hyeon Kim;Byeong-Ju Lee;Ji Young Ahn;Jei-Wan Lee;Hyun-Mi Lee;Soo Hyung Eo
    • Journal of Korean Society of Forest Science
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    • v.112 no.4
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    • pp.554-560
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    • 2023
  • To prevent illegal timber distribution, DNA markers have been used to identify the species and origin. However, extracting high-quality DNA from timber is difficult because of its physical and chemical properties. In this study, we investigated whether the age of timber tissue influences the yield of DNA extraction and the success rate of polymerase chain reaction (PCR) to understand the relationship between the establishment time of the wood annual ring and the extracted DNA concentration (ng/μl), purity (A260/A280), and PCR success rate (%) from pinewood, a major Korean domestic species. According to the results, it was observed that as the distance from the cambium increased, indicating that the tissue was older, the concentration and purity of the extracted DNA decreased significantly. For the trnM-trnV (285 bp) and rpoC1 (298 bp) regions, the PCR success rate was 100%. However, for the rbcL (1.3 kb) region, the PCR success rate was 66.67%. Moreover, PCR amplification of the rbcL region failed at all points older than 30 years. Thus, it is deduced that as time passes, along with the decay of timber cells, DNA is degraded, leading to a decrease in DNA concentration, purity, and PCR success rate. The results of this study are expected to be beneficial for future applications, such as the species identification of timber, providing valuable insights and potential utilization in this field.

Application of Gel-based Proteome Analysis Techniques to Studying Post-mortem Proteolysis in Meat

  • Hwang, I.H.
    • Asian-Australasian Journal of Animal Sciences
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    • v.17 no.9
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    • pp.1296-1302
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    • 2004
  • This study was conducted to evaluate the possible application of 2 D-SDS-PAGE (2 DE)-based proteome analysis techniques to the assessment of extreme proteolysis in postmortem skeletal muscle. Eight Hanwoo longissimus muscles were incubated immediately after slaughter for 24 h at 5$^{\circ}C$, 15$^{\circ}C$ or 36$^{\circ}C$. Warner Bratzler (WB)-shear force and ultrastructural configuration were determined at 24 h, and rate of proteolysis to 24 h was determined by 1 D-SDS-PAGE (1 DE) and 2 DE. In addition, tentative protein identification was performed from peptide mass fingerprints of MALDI-ToF analysis of major protein groups on 2 DE profiles. The result showed that although ultrastructural configuration was similar between the 5$^{\circ}C$ and 36$^{\circ}C$ treatments, meat at 5$^{\circ}C$ had higher WBshear force (approximately 5 kg greater). A higher rate of protein degradation at 36$^{\circ}C$ was observed based on Troponin-T degradation, 1 DE, and 2 DE analysis. This indicates that proteolysis during the early postmortem period was a significant determinant of shear force at 24 h. Little difference in proteolysis between 5$^{\circ}C$ and 15$^{\circ}C$ treatments was found based on classic 1 DE profile assessment. Meanwhile, considerable differences in the 2 DE profiles between the two treatments were revealed, with substantially higher rate of proteolysis at 15$^{\circ}C$ compared to 5$^{\circ}C$. Nuclease treatment improved 2 DE profile resolution. 400 ${\mu}$g and 600 ${\mu}$g of sample loading appeared to be appropriate for 24 cm pH 3-10 and pH 5-7 IPG strips, respectively. Protein detection and quantification of the 5$^{\circ}C$, 15$^{\circ}C$ and 36$^{\circ}C$ 2 DE profiles revealed 78, 163 and 232 protein spots respectively that were differentially modified in terms of their electrophoretic properties between approximately pI 5.3-7.7 with the molecular weight range of approximately 71-12 kDa. The current results demonstrated that 2 DE was a superior tool to 1 DE for characterising proteolysis in postmortem skeletal muscle.