• 제목/요약/키워드: hybridization(FISH)

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FISH를 이용한 다운증후군과 에드워드증후군의 신속한 산전확인 : 309예의 임상적 고찰 (Rapid prenatal diagnosis of Down syndrome and Edward syndrome by fluorescence In situ hybridization : Clinical experience with 309 cases)

  • 강진희;이숙환;박상희;박지현;김지연;한원보;김인현;박상원;장진범;이경진;박희진;전혜선;이경주;신중식;차동현
    • Journal of Genetic Medicine
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    • 제4권1호
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    • pp.64-71
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    • 2007
  • 목 적 : 다운증후군과 에드워드증후군의 빠른 진단에 있어 FISH 검사의 임상적 유용성과 한계성을 보고하고자 한다. 방 법 : 유전질환이 의심되는 고위험임신 309예에서 양수 검사를 통해 미배양 양수세포에서 18번과 21번 염색체의 probes를 이용한 FISH 검사를 시행하고 이들의 결과를 염색체 핵형분석 결과와 비교하였다. 결 과 : 평균연령은 34.18세, 평균임신주수는 18주(126.12 일)의 309예에서 FISH 검사는 모두 성공하였다. 각각 1예씩의 다운증후군과 에드워드증후군이 FISH로 신속한 진단이 가능했으며 이들은 염색체 핵형 검사에서 확인하였다. 그러나 18번과 21번 이외의 염색체의 이수성과 구조적 이상은 발견하지 못했는데 모두 12예(3.9%)로 상당부분을 차지했다. 앞으로 산전 선별검사에 있어 FISH검사과정의 자동화 기계화로 더 시간을 단축하고 가격을 낮추는 방안이 계속 개발되어야 할 것이다.

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1p36 deletion syndrome confirmed by fluorescence in situ hybridization and array-comparative genomic hybridization analysis

  • Kang, Dong Soo;Shin, Eunsim;Yu, Jeesuk
    • Clinical and Experimental Pediatrics
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    • 제59권sup1호
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    • pp.14-18
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    • 2016
  • Pediatric epilepsy can be caused by various conditions, including specific syndromes. 1p36 deletion syndrome is reported in 1 in 5,000-10,000 newborns, and its characteristic clinical features include developmental delay, mental retardation, hypotonia, congenital heart defects, seizure, and facial dysmorphism. However, detection of the terminal deletion in chromosome 1p by conventional G-banded karyotyping is difficult. Here we present a case of epilepsy with profound developmental delay and characteristic phenotypes. A 7-year-and 6-month-old boy experienced afebrile generalized seizure at the age of 5 years and 3 months. He had recurrent febrile seizures since 12 months of age and showed severe global developmental delay, remarkable hypotonia, short stature, and dysmorphic features such as microcephaly; small, low-set ears; dark, straight eyebrows; deep-set eyes; flat nasal bridge; midface hypoplasia; and a small, pointed chin. Previous diagnostic work-up, including conventional chromosomal analysis, revealed no definite causes. However, array-comparative genomic hybridization analysis revealed 1p36 deletion syndrome with a 9.15-Mb copy loss of the 1p36.33-1p36.22 region, and fluorescence in situ hybridization analysis (FISH) confirmed this diagnosis. This case highlights the need to consider detailed chromosomal study for patients with delayed development and epilepsy. Furthermore, 1p36 deletion syndrome should be considered for patients presenting seizure and moderate-to-severe developmental delay, particularly if the patient exhibits dysmorphic features, short stature, and hypotonia.

Triploid hybridization as a reproductive containment method of genetically modified fish, exemplified by fast-growing transgenic mud loach

  • Nam, Yoon-Kwon;Park, In-Seok;Kim, Dong-Soo
    • 한국양식학회:학술대회논문집
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    • 한국양식학회 2003년도 추계학술발표대회 논문요약집
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    • pp.41-41
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    • 2003
  • Transgenic triploid hybrid between fast-growingtransgenic mud loach (Misgurnus mizolepis) males and cyprinid loach (M. anguillicaudatus) females were generated and their performance on growth, feed conversion ability and reproduction were evaluated. Although the growth accelerations of diploid and triploid transgenic hybrids were not as much as those of original transgenic mud loaches, they still represented persistent growth stimulation ranging 11 to 28 fold when compared to their non-transgenic counterparts, with significantly improved feed conversion efficiency up to 2-fold (compared to non-transgenic hybrid) and 1.5-fold (compared to non-transgenic mud loach) in maximum. The gonad development of diploid hybrids was fertile in histological views regardless of transgenic genotypes but the extent of developmentin hybrid fish were less than mud loach diploids at the same age. On the other hands, very stringent sterility was obtained in both sexes of the triploid hybrid transgenics: ovary and testis from transgenic triploid hybrids were significantly depressed and any notable sign for maturation to ovum or spermatids was not detected. No viable embryo was obtained in a fertilization trial using the suspension prepared from the minced testes of transgenic triploid hybrids. This study may indicate the potential usefulness of triploid hybridization as a mean for reproductive containment of transgenic mud loach.

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생물학적 회분식 인 제거 공정에서 pH 영향과 미생물 군집의 변화 (Influence of Different Operational pH Conditions to Microbial Community in Biological Sequencing Batch Phosphorus Removal Process)

  • 안조환
    • 한국물환경학회지
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    • 제29권4호
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    • pp.459-465
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    • 2013
  • A sequencing batch reactor was operated under different pH conditions to see the influence of pH to microbial community in enhanced biological phosphorus removal (EBPR) systems. Long term influences of different steady-state pH conditions on the microbial community composition were evaluated by polymerase chain reaction (PCR)-denaturing gradient gel electrophoresis (DGGE) and fluorescence in situ hybridization (FISH). The shift in populations from polyphosphate-accumulating organisms (PAOs) to Alphaproteobacteria was observed when pH was changed from 7.5 to 7.0. Alphaproteobacteria with the typical morphological traits of tetrad-forming organisms (TFOs) eventually became dominant members. The alphaproteobacterial TFOs were the phenotype expected for glycogen-accumulating organisms (GAOs), which accumulate large amount of glycogen into the cell. The results strongly suggested that low operational pH condition encourages the appearance of the GAOs in EBPR process, significantly reducing the EBPR capacity.

음식물쓰레기와 폐활성 슬러지를 이용한 생물학적 수소생산

  • 상병인;이윤지;김동임;김동건;김지성;유명진;박대원
    • 한국신재생에너지학회:학술대회논문집
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    • 한국신재생에너지학회 2005년도 제17회 워크샵 및 추계학술대회
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    • pp.299-306
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    • 2005
  • Anaerobic fermentation of food waste (FW) and waste activated sludge (WAS) for hydrogen production was performed in CSTR (Continuous Stirred tank reactor) under various HRTs and volumetric mixing ratio (V/V) of two substrates, FW and WAS. The specific hydrogen production potential of FW was higher than that of WAS. However, pH drop in the CSTR for hydrogen production from FW was higher than that from WAS. The maintenance of desired pH during fermentative hydrogen production is regarded as the most important operation parameter for the stable hydrogen production. Therefore, when the potential of hydrogen production from FW and better buffer capacity of WAS, the proper mixture of FW and WAS for fermentative hydrogen production were considered as a useful complementary substrate. The maximum yield of specific hydrogen production, 140 mL/g VSS, was found at HRT of 2 day and the volumetric mixing ratio of 20:80 (WAS : FW). The spatial distribution of hydrogen producing bacteria was observed in anaerobic fermentative reactor using fluorescent in situ hybridization (FISH) method.

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The 16S rDNA Gene Sequencing and Specific Probes Designing for the Identification of Edwardsiella tarda

  • Lee Ju Suk;Choi Jae Young;Sim Doo Saing;Kim Hyeung Rak;Jung Tae Sung;Kim Jae Ho;Oh Myung Joo
    • Fisheries and Aquatic Sciences
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    • 제3권1호
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    • pp.64-70
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    • 2000
  • DNA probes for the l6S rRNA have been designed for the detection of Edwardsiella tarda. In order to accomplish this purpose, the l6S rRNA gene from E. tarda has been cloned and sequenced. Two highly feasible oligonucleotide probe sites have been determined by the database analysis programs presented by PCGENE and BLAST. These two probes have been evaluated by slot blot hybridization analysis. Hetero- and homo-trimeric templates have been synthesized using these two probe sites. The templates have been further multimerized by PCR to generate between 150 and 300 bp long DIG-11-dUTP labeled probes. Unlike 3' end labeled oligonucleotide probes or templates, multimerized probes showed no cross­hybridization in the given experimental condition. Furthermore, a significant increase in sensitivity has been observed with these probes. This method, we presented here, may be useful for the designing of probes for the detection of other fish pathogenic microorganisms also.

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