• Fisheries and Aquatic Sciences
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• v.21 no.8
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• pp.28.1-28.12
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• 2018

Intertidal macroalgae are exposed to many abiotic stress factors, and they must regularly react to changes in their environment. We used RNA-seq to describe how Porphyra umbilicalis (Rhodophyta) changes gene expression patterns to interact with different habitats. Tissue samples were taken from a typical habitat along the open-coast of the Northwest Atlantic, as well as from a rare, atypical habitat in an estuarine tidal rapid environment. Differential gene expression analyses suggest that pathogic bacteria and viruses may be a significant factor influencing the transcriptome in the human-impacted estuarine environment, but the atypical habitat does not necessarily induce more stress in Porphyra umbilicalis growing there. We found genes related to nitrogen transport are over-expressed in tissue from the open-coastal site compared to those from the estuarine site, where environmental N levels approach hypertrophic levels. Low N levels impede growth, but high levels are toxic to cells, and we use qPCR to show this species regulates expression of a putative high-affinity $NH_4{^+}$ transporter under low and high N conditions. Differences in expression of this transporter in these habitats appear to be inherited from parent to offspring and have general implications for adaptation to habitat in other species that are capable of asexual reproduction, as well as more specific implications for this species' use in aquaculture.

• Korean Journal of Ecology and Environment
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• v.47 no.3
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• pp.176-185
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• 2014

There are no population ecological research on the natural monument (No. 191) Jeju Cymbidium kanran in South Korea. In this study, we analyzed the population structure and fine-scale habitat affinity of C. kanran in Sanghyo-dong, Jejudo Island from Oct. 2013 to Feb. 2014. We observed total of 1,237 individuals (4,341 pseudobulbs) of C. kanran (989.6 population $ha^{-1}$) within (1.25 ha) and only 17 (1.4%) individuals were inflorescent. In 60.9% of the entire populations, disease symptoms such as spots and blight leaves were observed. C. kanran populaton exhibited reverse-J shaped size distribution based on leaf area classes as individual size parameter. The three size related attributes of C. kanran (no. of pseudobulb $r_s$=-0.159, no. of leaves $r_s$=-0.148 and leaf arera $r_s$=-0.114) and soil temperature revealed a negative relationship (p<0.0001). Most of C. kanran (95.4%) were grown under Castamopsis cuspidata and spatially, C. kanran were strongly clumped at all distances. Population characteristics of C. kanran in the study area were likely originated from species habitat affinity and successional environment. Through this study, base line data for C. kanran's habitat monitoring was established and conservation measures based on population characteristics were discussed.

• Journal of the Korean Society of Environmental Restoration Technology
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• v.18 no.6
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• pp.135-149
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• 2015

Korean fir(Abies koreana E.H.Wilson 1920), endemic tree species of Korean peninsula, is considered as vulnerable and endangered species to recent rapid environmental changes such as land use and climate change. There are limited activities and efforts to find natural habitats of Korean fir for conservation of the species and habitats. In this study, by applying SDMs (Species Distribution Models) based on climate and topographic factors of Korean fir, we developed Korean fir's predicted distribution model and explored novel natural habitats. In Mt. Shinbulsan, Youngnam region and Mt. Songnisan, we could find korean fir's two novel habitat and the former was the warmest($13^{\circ}C$ in annual mean temperature), the driest(1,200mm~1,600mm in annual rainfall) and relatively low altitude environment among Korean fir's habitats in Korea. The result of SDMs did not include mountain areas of Gangwon-do as habitats of A. nephrolepis, because there were different contributions of key habitat environment factors, summer rainfall, winter mean temperature and winter rainfall, between A. koreana and A. nephrolepis. Our results raise modification of other distribution models on Korean fir. Novel habitat of Korean fir in Mt. Shinbulsan revealed similar habitat affinity of the species, ridgy and rocky site, with other habitats in Korea. Our results also suggest potential areas for creation of Korea fir's alternative habitats through species reintroduction in landscape and ecosystem level.

• Journal of Korean Society of Forest Science
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• v.108 no.2
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• pp.189-199
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• 2019

The forest management paradigm has recently shifted from focusing on commercial production to focusing on ecosystem management. Accordingly, a natural seedling regeneration method that has a naturally high affinity has attracted much attention in recent years. The aim of this study was to determine the relationship among various environmental factors, lower stratum vegetation, and seedling regeneration in Pinus densiflora forests. The survey site comprised 50 sectors divided using the line transect method, and the survey data were divided into those from wet habitat (19 sites) and dry habitat (31 sites), depending on the soil humidity, and were analyzed separately to show the close relationship between soil humidity and natural seedling regeneration. As a result, the dry habitat exhibited high seedling density (157,419 trees/ha), with the main species being Quercus serrata, Zanthoxylum piperitum, Smilax china, and Pueraria lobata, while wet habitat exhibited low seedling density (57,895 trees/ha), with the main species being Stephanandra incisa, Castanea crenata, Lespedeza maximowiczii, Lysimachia barystachys, Aralia elata, and Styrax japonicus. The height and root-collar diameter under wet conditions exhibited faster growth than those under dry conditions. Height growth by the root-collar diameter in dry habitat increased faster than that in wet habitat. It was also confirmed that seedling regeneration in wet habitat exhibited a rapid growth pattern 5 years after germination. These results suggest that the seedlings begin to grow more rapidly after a period of suppression by competition with surrounding plants. Considering an ecosystem or ecological management approach, specific practices, such as bush control and vine clearing in wet habitats, should be more intensively conducted, especially at the beginning of the management operations.

• Journal of the Korean Wood Science and Technology
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• v.51 no.4
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• pp.270-282
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• 2023

Lower termites need symbiotic microbes for cellulose digestion. Elizabethkingia miricola strain BM10 has been proposed as a symbiotic microbe that assists in low-temperature digestion and metabolism of Reticulitermes speratus KMT1, a termite on Bukhan Mountain, Seoul, Korea. In E. miricola strain BM10, β-glucosidase genes expressed at 10℃ were identified, and the psychrophilic enzymatic characteristic was confirmed by heterogeneously expressed proteins. Crude β-glucosidase in the culture broth of E. miricola strain BM10 showed specific enzymatic properties, and its substrate affinity was 4.69 times higher than that of Cellic CTec2. Among the genes proposed as β-glucosidase, two genes, bglB_1 and bglA_2, whose gene expression was more than doubled at 10℃ than at 30℃, were identified. They were heterogeneously expressed in Escherichia coli and identified as psychrophilic enzymes with an optimal reaction temperature of about 20℃-25℃. In this study, E. miricola strain BM10, a symbiotic bacterium of lower termites, produced psychrophilic β-glucosidases that contribute to the spread of the low-temperature habitat of a lower termite, R. speratus KMT1.

• Korean Journal of Plant Taxonomy
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• v.38 no.4
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• pp.573-582
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• 2008

We report a newly found natural habitat of Abeliophyllum distichum in mountainous slope range of Yeongdong-gun, Chungbuk Province. Abeliophyllum distichum Nakai is one of the Korean monotypic endemic species. Natural growth habitats of this species have been recorded from seven sites up to now, and all of the natural habitats are located in middle (Chungbuk Prov.) and middle west (Jeonbuk Prov.) parts of South Korea. Among the previously recorded seven natural habitats, six sites have been designated as Korean national monuments and protected with in situ conservation. New natural habitat of A. distichum is located on northwest slope of stiff hillock area beside the small stream, Seolgye-ri, Yeongdong-eup, Yeongdong-gun, Chungbuk Province. Total growing area is nearly $3,000 m^2$. It is 10-25 cm in soil depth and pH 5.0-6.5 in soil acidity in that area. And many of A. distichum are clustered with 2-5 individuals extended by stoloniferous asexual reproduction. And the total numbers of A. distichum are about 700 individuals with only typical white flowers, and the ratio between pin type and thrum type is 37% and 63%, respectively. The huge population of A. distichum is growing with Quercus mongolica-Fraxinus rhynchophylla association in a mixed forest, and it shows high affinity with Stephanandra incisa, Ligustrum obtusifolium, Euonymus alatus for. ciliatodentatus, and Smilax sieboldi.

• Korean Journal of Plant Taxonomy
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• v.39 no.4
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• pp.254-263
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• 2009

The distribution and habitat characteristics of Echinosophora koreensis (Nakai) Nakai were investigated to compile basic data for conservation and restoration. The species Echinosophora koreensis is distributed within fourteen regions of the Korean Province of Gangwon, including Yanggu-gun, Inje-gun, Cheorwon-gun, Chuncheon-si and Hongcheon-gun. Natural habitats were located at altitudes of 192-626 m, with inclinations of $1-45^{\circ}$. One hundred and fifty seven vascular plant taxa were identified from 42 quadrats in 14 habitats. Dominant species among the woody plants, based on importance value, were Pinus densiflora and Quercus dentata in the tree (T1) layer, Quercus variabilis, Pinus densiflora and Quercus mongolica in subtree (T2) layer, and Fraxinus rhynchophylla, Prunus sargentii, Zanthoxylum schinifilium, and Ulmus davidiana var. japonica in the shrub (S) layer. Importance values for members of the herb layer were: Echinosophora koreensis 28.34%; Polygonatum odoratum var. pluriflorum 10.21%; Spodiopogon sibiricus 7.60%; Atractylodes ovata 4.77% and Carex lanceolata 4.13%. The importance values of the last four species were high, so they were at affinity with Echinosophora koreensis in their habitats. Average species diversity was 1.03, and evenness and dominance were found to be 0.82 and 0.16, respectively. The soil types were sandy loam and loam. Average field capacity was 13.28%, and the organic matter and soil pH were 6.70% and 5.77, respectively.

• Korean Journal of Ecology and Environment
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• v.49 no.1
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• pp.11-21
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• 2016

Cymbidium kanran Makino is being threatened in its own habitats due illegal collecting and habitat changes by vegetation growth along historical landuse change. In this study, we established habitat restoration model for conservation of C. kanran based on ecological diagnosis. Through exploration to Jeju Island in 2014 and 2015, we identified 27 unknown habitats of C. kanran and in there, abiotic variables and vegetation structure and composition were quantified. Altitudinal distribution of C. kanran was between 200 m~700 m a.s.l. and compared to distribution in 2004, Area of Occupation (AOO) decreased at 82%. Specific habitat affinity was not observed by evenly found in mountain slope and valley and summergreen and evergreen broadleaved forests, but likely more abundant in valley habitats with higher soil and ambient moisture. Total of 96 individual of C. kanran was observed with an average density of $942.6individuals\;ha^{-1}$. The plants showed relatively short leaf length (average=$10.7cm{\pm}1.1cm$) and small number of pseudo bulbs ($1.2{\pm}0.2$). Flowering and fruiting individuals were not observed in field. C. kanran was classified into endangered plant species as CR (Critically Endangered) category by IUCN criteria. Phenotypic plasticity of C. kanran was likely support to sustain in more shaded habitat environment and recent habatat changes to closed canopy and low light availability may exhibit negatively effects to C. kanran's life history. Restoring C. kanran habitat should create open environment as grassland and low woody species density.

• The Korean Journal of Malacology
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• v.26 no.1
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• pp.19-31
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• 2010

Seogundo is a small island adjacent to the southern coast of Jeju Island and connected to it by a boulder beach at low tide Surveys of this area were conducted from 2001 to 2009 to enumerate the mollusks there and also to examine their diversity, relative abundance, and ecological relationships. Both the boulder beach itself and several large tide pools were studied, including the coarse sand substrate and several species of seaweed and coralline algae found in the tide pools. Of the 121 species obtained or observed, there were 97 gastropods, 16 bivalves, and 8 polyplacophorans. Live specimens were obtained for about half of those species. About one third were found on rocky substrate, with the most common species being Nodilittorina radiata and Nerita japonica in the upper intertidal zone, N. radiata and Littorina brevicula in the middle intertidal, and Turbo (Lunella) coronata coreensis and Acanthopleura japonica in the lower intertidal and shallow subtidal. The seaweeds and coralline algae contained about 40% of all mollusk species. The most common mollusks in two species of brown seaweed were Ittibittum parcum, Musculus nanus, and Euplica scripta. In a species of red seaweed, Komaitrochus pulcher was the most frequent, as in the coralline algae, along with M. nanus. The coarse sand in the tidepools contained about 25% of the species, with the Cerithiidae having the largest number. A sample of beach drift contained 17 species, with Bittium aleutaceum and Rissoina (Phosinella) pura being most common. Most species, about 60%, were found in a variety of habitats, especially the marine flora; few species exhibited any habitat preferences. Biographically, Jeju Island is part of the Warm Temperate Northwest Pacific Province and the East China Sea ecoregion with a strong faunal affinity with southern Japan, eastern China, and northeastern Taiwan. Zonal-geographical groupings reveal that the fauna is mainly subtropical-low boreal, preferring moderately warm water, with a somewhat smaller number of tropical-subtropical species.

• Journal of Environmental Science International
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• v.19 no.11
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• pp.1337-1353
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• 2010

This study intended to investigate environmental factors including soil and vegetation in order to understand the environmental and ecological characteristics of 12 different habitats of Iris odaesanensis. These habitats, according to investigations, are mostly located at elevation of 280 m to 1,555 m with angles of inclination ranging from 2 degree to 30 degrees. A total of 273 vascular plants are identified in 23 quadrates of 12 habitats. Dominant species of woody plants in 12 habitats are represented as Quercus mongolica in the tree layer (T1) and the subtree (T2) layer, and Lespedeza maximowiczii, Lindera obtusiloba, Rhododendron schlippenbachii in the shrub (S) layer. The importance value of Iris odaesanensis is 9.65%, as regards the herbaceous layer, and 6 highly ranked species such as Carex siderosticta (3.92%), Meehania urticifolia (2.67%), Spodiopogon cotulifer (2.58%), Aconitum pseudolaeve (2.51%), Carex bostrychostigma (2.28%) and Disporum smilacinum (2.09%) are considered to be an affinity with Iris odaesanensis in their habitats. The degree of their average species diversity is 1.32, and that of dominance and evenness are 0.08 and 0.89, respectively. The type of soil is sandy loam and loam, and the average field capacity of soil is 28.31%. Their average organic matter is 16.71%, soil pH 5.29, and available phosphorus is 9.29%. Correlation coefficients analysis based on environmental factors, vegetation and soil analysis shows that the coverage of Iris odaesanensis is correlated with pH and dominance, and species richness is positive related with species diversity.