• Journal of Biomedical Engineering Research
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• v.38 no.2
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• pp.82-88
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• 2017

Enlargement of the lateral ventricles have been identified as a surrogate marker of neurological disorders. Quantitative measure of the lateral ventricle from MRI would enable earlier and more accurate clinical diagnosis in monitoring disease progression. Even though it requires an automated or semi-automated segmentation method for objective quantification, it is difficult to define lateral ventricles due to insufficient contrast and brightness of structural imaging. In this study, we proposed a fully automated lateral ventricle segmentation method based on a graph cuts algorithm combined with atlas-based segmentation and connected component labeling. Initially, initial seeds for graph cuts were defined by atlas-based segmentation (ATS). They were adjusted by partial volume images in order to provide accurate a priori information on graph cuts. A graph cuts algorithm is to finds a global minimum of energy with minimum cut/maximum flow algorithm function on graph. In addition, connected component labeling used to remove false ventricle regions. The proposed method was validated with the well-known tools using the dice similarity index, recall and precision values. The proposed method was significantly higher dice similarity index ($0.860{\pm}0.036$, p < 0.001) and recall ($0.833{\pm}0.037$, p < 0.001) compared with other tools. Therefore, the proposed method yielded a robust and reliable segmentation result.

• Journal of KIISE:Software and Applications
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• v.36 no.11
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• pp.936-946
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• 2009

A graph cuts method has recently attracted a lot of attentions for image segmentation, as it can globally minimize energy functions composed of data term that reflects how each pixel fits into prior information for each class and smoothness term that penalizes discontinuities between neighboring pixels. In previous approaches to graph cuts-based automatic image segmentation, GMM(Gaussian mixture models) is generally used, and means and covariance matrixes calculated by EM algorithm were used as prior information for each cluster. However, it is practicable only for clusters with a hyper-spherical or hyper-ellipsoidal shape, as the cluster was represented based on the covariance matrix centered on the mean. For arbitrary-shaped clusters, this paper proposes graph cuts-based image segmentation using mean shift analysis. As a prior information to estimate the data term, we use the set of mean trajectories toward each mode from initial means randomly selected in $L^*u^*{\upsilon}^*$ color space. Since the mean shift procedure requires many computational times, we transform features in continuous feature space into 3D discrete grid, and use 3D kernel based on the first moment in the grid, which are needed to move the means to modes. In the experiments, we investigate the problems of mean shift-based and normalized cuts-based image segmentation methods that are recently popular methods, and the proposed method showed better performance than previous two methods and graph cuts-based automatic image segmentation using GMM on Berkeley segmentation dataset.

• Journal of KIISE
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• v.42 no.10
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• pp.1222-1230
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• 2015

Segmentation of the anterior cruciate ligament (ACL) in knee MRI remains a challenging task due to its inhomogeneous signal intensity and low contrast with surrounding soft tissues. In this paper, we propose a multi-atlas-based segmentation of the ACL in knee MRI with locally-aligned probabilistic atlas (PA) in an iterative graph cuts framework. First, a novel PA generation method is proposed with global and local multi-atlas alignment by means of rigid registration. Second, with the generated PA, segmentation of the ACL is performed by maximum-aposteriori (MAP) estimation and then by graph cuts. Third, refinement of ACL segmentation is performed by improving shape prior through mask-based PA generation and iterative graph cuts. Experiments were performed with a Dice similarity coefficients of 75.0%, an average surface distance of 1.7 pixels, and a root mean squared distance of 2.7 pixels, which increased accuracy by 12.8%, 22.7%, and 22.9%, respectively, from the graph cuts with patient-specific shape constraints.

• Journal of the Korea Computer Graphics Society
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• v.22 no.4
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• pp.11-19
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• 2016

In this paper, we propose an automatic segmentation method of renal parenchyma on abdominal CT image using graph-cuts with shape constraint based on multi-probabilistic atlas. The proposed method consists of following three steps. First, to use the various shape information of renal parenchyma, multi-probabilistic atlas is generated by cortex-based similarity registration. Second, initial seeds for graph-cuts are extracted by maximum a posteriori (MAP) estimation and renal parenchyma is segmented by graph-cuts with shape constraint. Third, to reduce alignment error of probabilistic atlas and increase segmentation accuracy, registration and segmentation are iteratively performed. To evaluate the performance of proposed method, qualitative and quantitative evaluation are performed. Experimental results show that the proposed method avoids a leakage into neighbor regions with similar intensity of renal parenchyma and shows improved segmentation accuracy.

• Journal of KIISE:Software and Applications
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• v.35 no.9
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• pp.572-587
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• 2008

The Self-organizing Feature Map(SOFM) that is one of unsupervised neural networks is a very powerful tool for data clustering and visualization in high-dimensional data sets. Although the SOFM has been applied in many engineering problems, it needs to cluster similar weights into one class on the trained SOFM as a post-processing, which is manually performed in many cases. The traditional clustering algorithms, such as t-means, on the trained SOFM however do not yield satisfactory results, especially when clusters have arbitrary shapes. This paper proposes automatic clustering on trained SOFM, which can deal with arbitrary cluster shapes and be globally optimized by graph cuts. When using the graph cuts, the graph must have two additional vertices, called terminals, and weights between the terminals and vertices of the graph are generally set based on data manually obtained by users. The Proposed method automatically sets the weights based on mode-seeking on a distance matrix. Experimental results demonstrated the effectiveness of the proposed method in texture segmentation. In the experimental results, the proposed method improved precision rates compared with previous traditional clustering algorithm, as the method can deal with arbitrary cluster shapes based on the graph-theoretic clustering.

• Journal of Korea Multimedia Society
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• v.24 no.10
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• pp.1326-1335
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• 2021

As part of the cell division method, we proposed a method for segmenting images generated by topography microscopes through deep learning-based feature generation and graph segmentation. Hybrid vector shapes preserve the overall shape and boundary information of cells, so most cell shapes can be captured without any post-processing burden. NIH-3T3 and Hela-S3 cells have satisfactory results in cell description preservation. Compared to other deep learning methods, the proposed cell image segmentation method does not require postprocessing. It is also effective in preserving the overall morphology of cells and has shown better results in terms of cell boundary preservation.

• Journal of applied mathematics & informatics
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• v.34 no.1_2
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• pp.49-60
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• 2016

In this paper, two different approaches to chromatic number of a bipolar fuzzy graph are introduced. The first approach is based on the α-cuts of a bipolar fuzzy graph and the second approach is based on the definition of Eslahchi and Onagh for chromatic number of a fuzzy graph. Finally, the bipolar fuzzy vertex chromatic number and the edge chromatic number of a complete bipolar fuzzy graph, characterized.

• Journal of KIISE:Software and Applications
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• v.35 no.11
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• pp.671-680
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• 2008

Motion capture devices have been utilized in producing several contents, such as movies and video games. However, since motion capture devices are expensive and inconvenient to use, motions segmented from captured data was recycled and synthesized to utilize it in another contents, but the motions were generally segmented by contents producers in manual. Therefore, automatic motion segmentation is recently getting a lot of attentions. Previous approaches are divided into on-line and off-line, where ow line approaches segment motions based on similarities between neighboring frames and off-line approaches segment motions by capturing the global characteristics in feature space. In this paper, we propose a graph-based high-level motion segmentation method. Since high-level motions consist of repeated frames within temporal distances, we consider similarities between neighboring frames as well as all similarities among all frames within the temporal distance. This is achieved by constructing a graph, where each vertex represents a frame and the edges between the frames are weighted by their similarity. Then, normalized cuts algorithm is used to partition the constructed graph into several sub-graphs by globally finding minimum cuts. In the experiments, the results using the proposed method showed better performance than PCA-based method in on-line and GMM-based method in off-line, as the proposed method globally segment motions from the graph constructed based similarities between neighboring frames as well as similarities among all frames within temporal distances.

• Proceedings of the Korean Society of Broadcast Engineers Conference
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• 2013.06a
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• pp.64-65
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• 2013

본 논문에서는 슈퍼픽셀(superpixel) 단위의 그래프 컷 알고리즘을 적용하여 객체 추적의 정확도를 향상시키기 위한 방법을 제안한다. 먼저 영상 분할 기법을 사용하여 입력 영상을 슈퍼픽셀로 분할하고 각 슈퍼픽셀에서 색상 히스토그램을 이용한 특성 벡터를 생성한다. 그리고 특성 벡터에 지지벡터기계(support vector machines)를 사용하여 각 슈퍼픽셀의 객체 확률 값을 추정한다. 객체 확률 값을 데이터 항(data term)으로, 이웃한 슈퍼픽셀 간의 특성 벡터 차 값을 스무드 항(smooth term)으로 하여, 그래프 컷(graph cuts) 알고리즘으로 슈퍼픽셀들을 객체와 배경으로 분류하고 객체 슈퍼픽셀을 최대한으로 포함하는 객체 윈도우를 찾는다. 실험 결과는 제안하는 기법이 기존 기법들보다 객체 추적 성능이 우수함을 보여준다.

• Journal of the Semiconductor & Display Technology
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• v.16 no.2
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• pp.70-74
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• 2017

Given two stereo images of a scene, it is possible to recover a 3D understanding of the scene. This is the primary way that the human visual system estimates depth. This process is useful in applications like robotics, where depth sensors may be expensive but a pair of cameras is relatively cheap. In this work, we combined our interests to implement a graph cut algorithm for stereo correspondence, and performed evaluation against a baseline algorithm using normalized cross correlation across a variety of metrics. Experimental trials revealed that the proposed descriptor exhibited a significant improvement, compared to the other existing methods.