• Journal of Life Science
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• v.17 no.8 s.88
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• pp.1046-1052
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• 2007

Transferrin is a molecule carrying iron to store and maintain for iron homeostasis of living organisms. In this study, we have purified transferrin, as an iron-binding protein, from the last larval haemolymph of Papilio xuthus by KBr density gradient ultracentrifugation and gel filtration (superose 6 HR) using fast protein liquid chromatography (FPLC) and transferrin containing iron was identified by Ferene S staining. The purified haemolymph transferrin was shown to have molecular mass of 78 and 80 kDa and amino acid composition of transferrin was rich in aspartic acid, valine, leucine and glutamic acid. With immuno-diffusion assay, we confirmed the existence of the transferrin in the haemo-lymph and fat body by detection of visible and clear positive reaction. From the quantitative comparison by rocket immuno-electrophoresis process, the amount of transferrin were increased in the haemolymph of 3 days after pupation and the whole 5 days after pupation. Here, with biochemical and immunohistochemical analysis, we speculate the relationship of transferrin between the physical characteristics and distribution during metamorphosis of P. xuthus.

• Journal of Dairy Science and Biotechnology
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• v.31 no.2
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• pp.171-177
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• 2013

The dairy industry has consistently grown via the expansion of dairy-based food categories. Dairy product consumption is stable since the nutrient composition in dairy products is ideal for human health. However, dairy products are highly susceptible to food-borne pathogens. Controlling the safety of dairy products is thus important when considering the nutrient-rich matrix of this food category. Currently, immunoassays or molecular biology techniques have been used to evaluate the safety of dairy products in Korea. These methods are based on the detection of proteins and thus have low reproducibility and sensitivity. Recent techniques to detect food-borne pathogens have focused on genetic analyses. Rapid detection methods for food-borne pathogens in milk and dairy products using polymerase chain reaction (PCR) techniques, such as conventional PCR, real-time PCR, repetitive sequence-based (rep)-PCR, PCR-denaturing gradient gel electrophoresis (DGGE), and digital PCR, are reviewed in this article. The aim of this review was to contribute knowledge of the relationship between microflora and the quality of dairy products. This study will also assist in the immediate monitoring of food-borne pathogens in milk and dairy products when an outbreak related to this food category occurs.

• The Korean Journal of Ecology
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• v.27 no.2
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• pp.79-86
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• 2004

An extensive study of the vegetation characteristics of the Hamersley Ranges, a mountainous desert area of north-west Australia, facilitated the comparison of plant species diversity measures with mountainous deserts of other parts of the world. Alpha diversity was defined as the number of species co-existing at local scales and was found to average 18 species per 0.1 ha for the Hamersley Ranges. This was found to be similar to seven other mountainous deserts in North and South America, and southern Africa. Variation in alpha diversity between these deserts was found to considerably lower than within deserts, suggesting that local processes control species richness at local scales. Beta diversity, defined here as turnover in species composition at various spatial scales, can be measured in many ways. For the Hamersley Ranges, Wilson's β ranged from 1.2 to 1.6 for five sites along a topographic gradient, whereas Whittaker's β between different plant communities was found to average 0.93. Comparable data was not found for other desert areas, but comparisons to non-desert areas suggest beta diversity within landscapes is relatively high and is likely to reflect the considerable landform heterogeneity of the Hamersley Ranges. 55∼70% of species were shared between different landscapes of the Hamersley Ranges; comparisons to other regions suggest beta diversity at this scale is relatively low. Gamma diversity, the number of species over large spatial extents, was successfully compared using regression analysis of the log-log species - area relationship. This revealed that the northern Sonoran desert has significantly less species than the Nama (inland) Karoo and Hamersley Ranges over medium spatial extents, but species numbers were similar at a regional scale. Several constraints to the valid comparison of species diversity were identified, including lack of standardisation of sampling techniques, the wide range of measures employed, general lack of published data, and the influence of the various components of spatial scale on most diversity measures. Recommendations on how to improve future comparative work are provided.

• Journal of Korean Society of Forest Science
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• v.58 no.1
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• pp.60-69
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• 1982

According to the distance from the industrial complex, 5 sample plots were selected to study the changes of vegetational composition of the forest community caused by air pollution in Ulsan. Then 5 subplots were set within a plot. We considered that this gradient analysis by distance could be coincided with the gradual transition of plant succession. Number of species, number of individuals, species diversity, evenness increased and similarity index decreased with increasing distance from the industrial complex. Robinia pseudoacacia, Smilax china appeared to be tolerant to air pollution whereas Quercus variabilis, Q-aliena, Q. dentata and Albizzia julibrissin to be sensitive.

• Asian-Australasian Journal of Animal Sciences
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• v.28 no.4
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• pp.584-591
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• 2015

This study characterized the fecal bacterial community structure and inter-individual variation in 30-week-old Duroc pigs, which are known for their excellent meat quality. Pyrosequencing of the V1-V3 hypervariable regions of the 16S rRNA genes generated 108,254 valid reads and 508 operational taxonomic units at a 95% identity cut-off (genus level). Bacterial diversity and species richness as measured by the Shannon diversity index were significantly greater than those reported previously using denaturation gradient gel electrophoresis; thus, this study provides substantial information related to both known bacteria and the untapped portion of unclassified bacteria in the population. The bacterial composition of Duroc pig fecal samples was investigated at the phylum, class, family, and genus levels. Firmicutes and Bacteroidetes predominated at the phylum level, while Clostridia and Bacteroidia were most abundant at the class level. This study also detected prominent inter-individual variation starting at the family level. Among the core microbiome, which was observed at the genus level, Prevotella was consistently dominant, as well as a bacterial phylotype related to Oscillibacter valericigenes, a valerate producer. This study found high bacterial diversity and compositional variation among individuals of the same breed line, as well as high abundance of unclassified bacterial phylotypes that may have important functions in the growth performance of Duroc pigs.

• Journal of the Korean Society of Environmental Restoration Technology
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• v.12 no.6
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• pp.1-17
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• 2009

This study was carried out to classify vegetation structure of the Anseong district in the Deogyusan National Park from May 2007 to September 2008 using the gradient analyses and phytosociological method. The vegetation communities were classified into Quercus mongolica, Carpinus laxiflara, Q. serrata, Fraxinus mandshurica, Betula davurica, B. costata, Pinus densiflora and Abies koreana. Characteristics of the vegetation such as species composition, layer structure, vegetation ratio, and the distribution of individual trees by DBH were significantly different among communities. The order of important value of the forest community with DBH 2cm above plants was Q. mongolica (40.02), C. laxiflora (25.65), Q. serrata (24.68), F. mandshurica (21.66), P. densiflora (19.12), Acer pseudosieboldianum (16.96), C. cordata (11.87), B. davurica (11.66), B. costata (10.90), Styrax obassia (10.90) and A. koreana (10.41). Distribution of DBH P. densiflora had a formality distribution, suggesting a continuous domination of these species over the other species for the time being. In contrast, F. mandshurica appeared limited to the valley of the sheet and a higher frequency of young individuals, suggesting a continuous domination of these species the development of a climax forest terrain. This study showed the correlation between each community and the environment according to DCCA ordination. The A. koreana community predominated on the northern slope of the park in the high elevation habitats which had many O-M. F. mandshurica community predominated in the highest elevation habitats which had many Moisture, EX-Cation and T-N. The P. densiflora community mainly occurred on the southern slope of the park in the low elevation habitats which had few Moisture, O-M and T-N. The Q. serrata community and C. laxifiora community appeared on the park in the middle habitats.

• Proceedings of the Korean Society of Organic Agriculture Conference
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• 2009.12a
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• pp.302-302
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• 2009

유기농업에서 유기물은 양분의 공급, 토양의 이화학성 개선, 토양의 생물학적 건전성 유지 등 중요한 역할을 한다. 토양의 생물학적 건전성은 토양의 생태계적 기능을 지속적으로 유지시키는 토양미생물이 관여하고 있다. 따라서 본 연구는 유기물의 장기연용에 따른 밭토양 미생물의 다양성을 비교 분석하였다. 여러 가지 유기자원을 동일한 기준으로 매년 동일 장소에 처리하였다. 사용된 유기자원은 가축분퇴비, 채종유박인 유기질비료, 볏짚으로만 퇴비화한 볏짚퇴비와 겨울철 휴한기에 헤어리베치를 재배하여 이듬해 봄에 예취한 후 토양에 환원한 녹비처리구, NPK구, 가축분퇴비를 혼용처리한 NPK퇴비군, 양분을 전혀 시용하지 않은 무비구 등 총 7처리구였다. 각각의 처리구에서 토양(0-20 cm)을 채취하여 배양성 토양미생물은 희석평판법으로 해당 선백배지에 시료를 도말 하여 조사하였고 비배양성 미생물은 토양으로부터 genomic DNA를 추출하여 세균의 16S rDNA를 증폭시킨 후 denaturing gradient gel electrophoresis (DGGE)를 수행하여 분석하였다. 주요결과를 요약하면 밭토양에 서식하는 토양미생물의 균수는 처리별간의 차이를 보였으며 유기물처리구가 화학비료처리구보다 높았다. DGGE 분석을 통해 유기물 처리에 따른 군집의 다양성을 살펴본 결과 Fig. 1에서 보는바와 같이 Gel 상에서 다양한 위치의 밴드를 확인할 수 있었고 처리별로 특이 밴드가 있음을 확인할 수 있었다. Fig. 1에서 얻은 DGGE profile상의 밴드 강도와 수를 비교하여 Fig 2와 같은 dendrogram을 나타낼 수 있었다.

• Bulletin of the Korean Chemical Society
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• v.33 no.1
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• pp.177-182
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• 2012

A new composition of standardized Scutellariae Radix extract (HPO12) was developed for treatment of Alzheimer's disease. For the preclinical pharmacokinetic study of HPO12, a rapid, sensitive, and selective LCMS/MS method was developed and validated for the simultaneous determination of 4 bioactive compounds, baicalein, baicalin, wogonin, and wogonoside. After extraction with ethylacetate, chromatographic analysis was performed on a Thermo $C_{18}$ column ($150mm{\times}2.1mm$, $3{\mu}m$) with a mobile phase consisting of 0.1% formic acid (A) and 0.1% formic acid in 95% acetonitrile (B) by using gradient elution at a flow rate of $250{\mu}L/min$. Analytes introduced to a mass spectrometer were monitored by multiple reaction monitoring (MRM) in positive ion mode. Using $25{\mu}L$ of plasma sample, the method was validated over the following concentration ranges: 25-5000 ng/mL for baicalein, 20-40000 ng/mL for baicalin, 1-1000 ng/mL for wogonin, and 5-10000 ng/mL for wogonoside. The intra- and inter-day precision and accuracy of the quality control samples at the 4 concentrations showed $\leq$ 13.7% relative standard deviation (RSD) and 86.6-105.5% accuracy. The method was successfully applied to determine the concentrations of baicalein, baicalin, wogonin, and wogonoside in rat plasma after intraperitoneal and oral administrations of HPO12.

• Journal of Korean Society on Water Environment
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• v.34 no.5
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• pp.447-461
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• 2018

To realize river restoration that ecological characteristics of the river are reflected, we classified the river into four reaches of valley stream, upstream, midstream, and downstream based on substrate as well as riverbed gradient obtained from the relationship between distance from the river mouth, and above sea level. Considering that the rivers of Korea have been dominated by various and intense artificial interferences over a lengthy period, we determined cross sectional range of the river based on the geological map and clarified transformation degree by reach. Vegetation profile diagram was prepared by depicting horizontal range and vertical stratification of major vegetation appearing in a belt transect of 10 m breadth installed between weirs constructed in both sides of the river. Restoration models by river reach were prepared based on breadth of waterway, bare ground, herb, shrub, and tree dominated vegetation zones on vegetation profiles wherein a flooding regime was reflected. Species composition information collected from vegetation established in each zone was systematized to use for restoring each reach ecologically. Further, background that longitudinal reaches and horizontal zones were divided, was discussed by comparing with case studies in foreign countries. In addition, necessity of ecological restoration of the river was discussed based on degree of integrity of Korean rivers, ecological significance of riparian vegetation, and importance of reference information for ecological restoration of the river.

• Ocean and Polar Research
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• v.27 no.4
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• pp.381-395
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• 2005

The spatial distributions of macrobenthic communities in Masan Bay were investigated during summer and winter, 2004. A total of 104 species were sampled with mean density of $448ind./m^2$ and biomass of $77.1g/m^2$ in winter. In summer, a total of 107 species occurred with $485ind./m^2$ and a biomass of $94.5g/m^2$. The most dominant species in winter were Paraprionospio pinnata (24.2%) among polychaetous worms and Theora fragilis (14.1%) among molluscs, but they were replaced in summer by Prionospio chirrifera (20.4%) and Lumbrineris longifolia (14.5%). The difference in species composition and abundance of benthic communities between the two seasons was due to the hypoxia in the bottom layer of the inner bay during summer, which defaunated the macrofauna of the sediments. In the winter when DO concentration increased to normoxia, the pelagic larvae of benthic fauna settled in the soft sediments, but there was a spatial gradient in values of total biomass, density, and H' and benthic pollution index (BPI): higher values were found toward the mouth of the bay. The multivariate analyses like the cluster analysis and MDS ordination showed that Masan Bay could be divided into two or four stational groups in winter and summer whether the hypoxia occurred or not. Group I consisted of sites at the inner bay and central area and Group II, sites at the bay mouth. In summer the inner bay area could be further divided into the shallow impoverished area and the deeper abiotic one.