• 제목/요약/키워드: geographical methods

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Status and Quality Analysis on the Biodiversity Data of East Asian Vascular Plants Mobilized through the Global Biodiversity Information Facility (GBIF) (세계생물다양성정보기구(GBIF)에 출판된 동아시아 관속식물 생물다양성 정보 현황과 자료품질 분석)

  • Chang, Chin-Sung;Kwon, Shin-Young;Kim, Hui
    • Journal of Korean Society of Forest Science
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    • v.110 no.2
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    • pp.179-188
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    • 2021
  • Biodiversity informatics applies information technology methods in organizing, accessing, visualizing, and analyzing primary biodiversity data and quantitative data management through the scientific names of accepted names and synonyms. We reviewed the GBIF data published by China, Japan, Taiwan, and internal institutes, such as NIBR, NIE, and KNA of the Republic of Korea, and assessed data in diverse aspects of data quality using BRAHMS software. Most data from four Asian countries have quality problems with the lack of data consistency and missing information on georeferenced data, collectors, collection date, and place names (gazetteers) or other invalid data forms. The major problem is that biodiversity management institutions in East Asia are using unstructured databases and simple spreadsheet-type data. Owing to the nature of the biodiversity information, if data relationships are not structured, it would be impossible to secure the data integrity of scientific names, human names, geographical names, literature, and ecological information. For data quality, it is essential to build data integrity for database management and training systems for taxonomists who are continuous data managers to correct errors. Thus, publishers in East Asia play an essential role not only in using specialized software to manage biodiversity data but also in developing structured databases and ensuring their integration and value within biodiversity publishing platforms.

Molecular epidemiology of Aleutian mink disease virus causing outbreaks in mink farms from Southwestern Europe: a retrospective study from 2012 to 2019

  • Prieto, Alberto;Fernandez-Antonio, Ricardo;Lopez-Lorenzo, Gonzalo;Diaz-Cao, Jose Manuel;Lopez-Novo, Cynthia;Remesar, Susana;Panadero, Rosario;Diaz, Pablo;Morrondo, Patrocinio;Diez-Banos, Pablo;Fernandez, Gonzalo
    • Journal of Veterinary Science
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    • v.21 no.4
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    • pp.65.1-65.13
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    • 2020
  • Background: Aleutian mink disease virus (AMDV) causes major economic losses in fur-bearing animal production. The control of most AMDV outbreaks is complex due to the difficulties of establishing the source of infection based only on the available on-farm epidemiological data. In this sense, phylogenetic analysis of the strains present in a farm may help elucidate the origin of the infection and improve the control and biosecurity measures. Objectives: This study had the following aims: characterize the AMDV strains from most outbreaks produced at Spanish farms between 2012-2019 at the molecular level, and assess the utility of the combined use of molecular and epidemiological data to track the possible routes of infection. Methods: Thirty-seven strains from 17 farms were partially sequenced for the NS1 and VP2 genes and analyzed phylogenetically with other strains described worldwide. Results: Spanish AMDV strains are clustered in four major clades that generally show a good geographical correlation, confirming that most had been established in Spain a long time ago. The combined study of phylogenetic results and epidemiological information of each farm suggests that most of the AMDV outbreaks since 2012 had been produced by within-farm reservoirs, while a few of them may have been due to the introduction of the virus through international trade. Conclusions: The combination of phylogenetic inference, together with epidemiological data, helps assess the possible origin of AMDV infections in mink farms and improving the control and prevention of this disease.

A Report of Chigger Mites on the Striped Field Mouse, Apodemus agrarius, in Southwest China

  • Chen, Yan-Ling;Guo, Xian-Guo;Ren, Tian-Guang;Zhang, Lei;Fan, Rong;Zhao, Cheng-Fu;Zhang, Zhi-Wei;Mao, Ke-Yu;Huang, Xiao-Bin;Qian, Ti-Jun
    • Parasites, Hosts and Diseases
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    • v.59 no.6
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    • pp.625-634
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    • 2021
  • Based on the field investigations in 91 investigation sites (counties) in southwest China between 2001 and 2019, the present paper reported the chigger mites on A. agrarius mice in southwest China for the first time by using a series of statistical methods. From 715 striped field mice captured in 28 of 91 investigated sites, only 255 chiggers were collected, and they were identified as 14 species, 6 genera in 3 subfamilies under 2 families. Of 715 A. agrarius mice, only 24 of them were infested with chigger mites with low overall prevalence (PM=3.4%), overall mean abundance (MA=0.36 mites/host) and overall mean intensity (MI=10.63 mites/host). The species diversity and infestation of chiggers on A. agrarius were much lower than those previously reported on some other rodents in southwest China. On a certain species of rodent, A. agrarius mouse in southwest China seems to have a very low susceptibility to chigger infestations than in other geographical regions. Of 14 chigger species, there were 3 dominant species, Leptotrombidium sialkotense, L. rupestre and Schoengastiella novoconfuciana, which were of aggregated distribution among different individuals of A. agrarius hosts. L. sialkotense, one of 6 main vectors of scrub typhus in China, was the first dominant on A. agrarius. The species similarity of chigger mites on male and female hosts was low with CSS=0.25, and this reflects the sex-bias of different genders of A. agrarius mice in harboring different chigger species.

A Study on the Characteristics of Urban Re-Organization regarding as an Establishment of New High-Speed Railway Stations focused on JR Kyushu's Main Stations (고속철도역 신설과 도시 재구조화 연계 계획의 특성 - JR큐슈 주요 역을 중심으로)

  • Shin, Ye-kyeong;Jung, Hye-jin
    • Asia-pacific Journal of Multimedia Services Convergent with Art, Humanities, and Sociology
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    • v.6 no.7
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    • pp.427-437
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    • 2016
  • This study has the goal of analyzing the techniques and characteristics of urban development, after additionally constructing the high-speed railway in Japan's Kyushu district and building a new railway station to enable the existing traditional stations accommodate with the high-speed railway. Such analysis is made in order to draw the conclusion of its intended (designed) meaning and attributes and to further research on finding an applicable urban development method in the domestic railway station development. The object of this study includes examples of stations renewed within the five years when Shinkansen in the Kyushu district was extended or stations which are in process of development such as Hakata station, Kumamoto station, and Kagoshima-chuo station. From the analysis of this study, the strategies are as follows.; active connecting both geographical location and function of Station, re-establishment of relation with city center and Station, establishment of close linking system for both tourist spot development, methods of Shinkansen line construction and extension a development opposite site of railway, securing the living population from high density & Mixed use development of Station Building.

The Formation of Linear Thinking in Traditional Chinese Music and Its Causes (중국 전통음악 선형적 사유의 형성과 그 원인)

  • Li Ruibiao
    • The Journal of the Convergence on Culture Technology
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    • v.9 no.2
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    • pp.429-436
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    • 2023
  • Traditional Chinese music has a deep indigenous color and has its own unique way of thinking and characteristics. A consensus has already been formed that linear thinking is a major feature of traditional Chinese music, and it has been implemented in both traditional multi-tone and single-tone music. It is mainly expressed in the form of single-tone music or single-tone music. This linear thought of traditional Chinese music is formed by influencing factors in various fields. For example, it is related to national culture, geographical and natural environment, religious and philosophical background, traditional Chinese notation, individual characteristics of traditional musical instruments, Yulje, composition, and transmission methods. This thinking is different from Western classical music that pursues three-dimensional thinking, and Western music emphasizes the harmony of harmony, harmony of tone and texture, logic and identity of structure, and emphasizes the aspect of space. However, traditional Chinese music emphasizes the horizontal development of melody, the fluency of ancestors, and the continuity of structure. We aims to analyze the causes of linear thinking of traditional Chinese music so that it can be more useful in educational aspects and promote the succession and development of traditional music by transferring knowledge of ethnic music.

Literature Review on Health Effect Surveys of Residents in Environmentally Contaminated Areas in South Korea from 1997 to 2021 (한국 환경오염 취약지역 주민 건강영향조사 문헌고찰(1997~2021))

  • Kyung-Hwa Choi;Sujung Kim;Hyun A Jang;Dahee Han;Ho-Jang Kwon;Yong Min Cho
    • Journal of Environmental Health Sciences
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    • v.49 no.3
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    • pp.134-148
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    • 2023
  • Background: The conducting of health effect surveys (HESs) in environmentally contaminated vulnerable areas (ECVAs) by the central and local governments has been increasing apace with the increase in demand for HESs since the Environmental Health Act was enacted in South Korea in 2008. Objectives: This study aimed to review the HESs of residents in ECVAs conducted in South Korea. Methods: An analysis was performed on 125 reports obtained from the Environment Digital Library, PRISM, and local government websites after selecting from 803 projects obtained as ECVAs from the Korea ON-Line E-Procurement System (1997~2021), National Institute Environment Research (2000~2021), and Korea Environmental Industry and Technology Institute (2009~2021). The reports were classified by background (residents' demand, HES, and more), research design (cross-sectional study, cohort, ecological study, and panel), pollution source (abandoned metal mine (AMM), industrial complex (IC), and more), and assessment method of exposure and health effects. The survey area was converted into administrative district codes for geographical mapping. Results: There were 37, 34, 18, and 10 cases associated with AMM, IC, waste incinerators, and coal-fired power plants, respectively. Most of the studies conducted were cross-sectional studies and ecological studies. The proportion of epidemiological investigations by residents' demand showed an increase from 0.0% to 8.9% for the central government while decreasing from 16.7% to 14.3% for local governments after 2008 compared to before 2008. HESs increased at both the central and local government levels since 2014. For the evaluation method, 365 environmental hazards, 319 health outcomes, and 302 biological markers were investigated, with the most commonly investigated items being metals, cancer, and blood metals. Conclusions: HESs of residents in ECVAs in South Korea have been continuously developed both quantitatively and qualitatively. Future improvements are expected, and systematic review and classification of the HESs is warranted.

Restoration of Missing Data in Satellite-Observed Sea Surface Temperature using Deep Learning Techniques (딥러닝 기법을 활용한 위성 관측 해수면 온도 자료의 결측부 복원에 관한 연구)

  • Won-Been Park;Heung-Bae Choi;Myeong-Soo Han;Ho-Sik Um;Yong-Sik Song
    • Journal of the Korean Society of Marine Environment & Safety
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    • v.29 no.6
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    • pp.536-542
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    • 2023
  • Satellites represent cutting-edge technology, of ering significant advantages in spatial and temporal observations. National agencies worldwide harness satellite data to respond to marine accidents and analyze ocean fluctuations effectively. However, challenges arise with high-resolution satellite-based sea surface temperature data (Operational Sea Surface Temperature and Sea Ice Analysis, OSTIA), where gaps or empty areas may occur due to satellite instrumentation, geographical errors, and cloud cover. These issues can take several hours to rectify. This study addressed the issue of missing OSTIA data by employing LaMa, the latest deep learning-based algorithm. We evaluated its performance by comparing it to three existing image processing techniques. The results of this evaluation, using the coefficient of determination (R2) and mean absolute error (MAE) values, demonstrated the superior performance of the LaMa algorithm. It consistently achieved R2 values of 0.9 or higher and kept MAE values under 0.5 ℃ or less. This outperformed the traditional methods, including bilinear interpolation, bicubic interpolation, and DeepFill v1 techniques. We plan to evaluate the feasibility of integrating the LaMa technique into an operational satellite data provision system.

The Use of the Internal Transcribed Spacer Region for Phylogenetic Analysis of the Microsporidian Parasite Enterocytozoon hepatopenaei Infecting Whiteleg Shrimp (Penaeus vannamei) and for the Development of a Nested PCR as Its Diagnostic Tool

  • Ju Hee Lee;Hye Jin Jeon;Sangsu Seo;Chorong Lee;Bumkeun Kim;Dong-Mi Kwak;Man Hee Rhee;Patharapol Piamsomboon;Yani Lestari Nuraini;Chang Uook Je;Seon Young Park;Ji Hyung Kim;Jee Eun Han
    • Journal of Microbiology and Biotechnology
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    • v.34 no.5
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    • pp.1146-1153
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    • 2024
  • The increasing economic losses associated with growth retardation caused by Enterocytozoon hepatopenaei (EHP), a microsporidian parasite infecting penaeid shrimp, require effective monitoring. The internal transcribed spacer (ITS)-1 region, the non-coding region of ribosomal clusters between 18S and 5.8S rRNA genes, is widely used in phylogenetic studies due to its high variability. In this study, the ITS-1 region sequence (~600-bp) of EHP was first identified, and primers for a polymerase chain reaction (PCR) assay targeting that sequence were designed. A newly developed nested-PCR method successfully detected the EHP in various shrimp (Penaeus vannamei and P. monodon) and related samples, including water and feces collected from Indonesia, Thailand, South Korea, India, and Malaysia. The primers did not cross-react with other hosts and pathogens, and this PCR assay is more sensitive than existing PCR detection methods targeting the small subunit ribosomal RNA (SSU rRNA) and spore wall protein (SWP) genes. Phylogenetic analysis based on the ITS-1 sequences indicated that the Indonesian strain was distinct (86.2% nucleotide sequence identity) from other strains collected from Thailand and South Korea, and also showed the internal diversity among Thailand (N = 7, divided into four branches) and South Korean (N = 5, divided into two branches) samples. The results revealed the ability of the ITS-1 region to determine the genetic diversity of EHP from different geographical origins.

Comparison of Lambertian Model on Multi-Channel Algorithm for Estimating Land Surface Temperature Based on Remote Sensing Imagery

  • A Sediyo Adi Nugraha;Muhammad Kamal;Sigit Heru Murti;Wirastuti Widyatmanti
    • Korean Journal of Remote Sensing
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    • v.40 no.4
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    • pp.397-418
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    • 2024
  • The Land Surface Temperature (LST) is a crucial parameter in identifying drought. It is essential to identify how LST can increase its accuracy, particularly in mountainous and hill areas. Increasing the LST accuracy can be achieved by applying early data processing in the correction phase, specifically in the context of topographic correction on the Lambertian model. Empirical evidence has demonstrated that this particular stage effectively enhances the process of identifying objects, especially within areas that lack direct illumination. Therefore, this research aims to examine the application of the Lambertian model in estimating LST using the Multi-Channel Method (MCM) across various physiographic regions. Lambertian model is a method that utilizes Lambertian reflectance and specifically addresses the radiance value obtained from Sun-Canopy-Sensor(SCS) and Cosine Correction measurements. Applying topographical adjustment to the LST outcome results in a notable augmentation in the dispersion of LST values. Nevertheless, the area physiography is also significant as the plains terrain tends to have an extreme LST value of ≥ 350 K. In mountainous and hilly terrains, the LST value often falls within the range of 310-325 K. The absence of topographic correction in LST results in varying values: 22 K for the plains area, 12-21 K for hilly and mountainous terrain, and 7-9 K for both plains and mountainous terrains. Furthermore, validation results indicate that employing the Lambertian model with SCS and Cosine Correction methods yields superior outcomes compared to processing without the Lambertian model, particularly in hilly and mountainous terrain. Conversely, in plain areas, the Lambertian model's application proves suboptimal. Additionally, the relationship between physiography and LST derived using the Lambertian model shows a high average R2 value of 0.99. The lowest errors(K) and root mean square error values, approximately ±2 K and 0.54, respectively, were achieved using the Lambertian model with the SCS method. Based on the findings, this research concluded that the Lambertian model could increase LST values. These corrected values are often higher than the LST values obtained without the Lambertian model.

Korean War Archiving Project And Documenting Localities in University of Hawai'i at Mānoa Library (하와이 대학교 도서관 한국 전쟁 아카이브 구축과 로컬리티 기록화)

  • Ellie Kim;Yeajin Park;Boyoung Choi
    • Journal of Korean Society of Archives and Records Management
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    • v.24 no.3
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    • pp.131-143
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    • 2024
  • This article examines the cases of archive development by research institutions for overseas Korean studies from the perspective of documenting the locality and explores development plans. The study investigates the impact of the solidarity between overseas Korean studies institutions and Korea-related communities in the region on the expansion of archives and the practice of locality documentation, using the case of the Korean War Archive Collection at the University of Hawai'i at Mānoa Library. For this, it reexamines the implications of locality and locality documentation. In addition, it discusses the methods of Korean studies locality documentation emerging abroad, such as the locality where the two geographical areas of Korea and Hawaii are fused. Since 2023, the University of Hawai'i at Mānoa Library has been forming a network with the Korean War Veterans Association Hawaii Chapter 1 (KWVA) to collect and archive materials related to the Korean War. This is a case where the relationship between the archivists and the donor community has been developed to practice documenting the locality regarding Korean studies abroad. It proposes locality documentation as a way to expand archives in overseas Korean studies institutions that inevitably rely on the collection of records and discusses the importance of solidarity with Korea-related local communities. Finally, it shares the role of the record management subject and the implications found through the case.